EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000010390 (Gene tree)
Gene ID: -
Gene Symbol: lsm7
Alias: fj64g01|wu:fj64g01|zgc:66405
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1223 bases
Position: chrgroupVIII:13098906-13100128
Accession: ZDB-GENE-030131-8284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000013728	LSM	PF01423.22	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000013753	-	312	-	ENSGACP00000013728	103 (aa)	-	G3P804

Gene Model

Click here to download ENSGACG00000010390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010390	lsm7	100	92.233	ENSG00000130332	LSM7	100	93.878	Homo_sapiens
ENSGACG00000010390	lsm7	96	94.949	ENSAPOG00000015573	lsm7	85	94.949	Acanthochromis_polyacanthus
ENSGACG00000010390	lsm7	100	92.233	ENSAMEG00000005484	LSM7	100	92.233	Ailuropoda_melanoleuca
ENSGACG00000010390	lsm7	94	97.938	ENSACIG00000006498	lsm7	77	97.938	Amphilophus_citrinellus
ENSGACG00000010390	lsm7	99	98.039	ENSAOCG00000001077	lsm7	93	98.039	Amphiprion_ocellaris
ENSGACG00000010390	lsm7	100	98.058	ENSAPEG00000024447	lsm7	93	98.039	Amphiprion_percula
ENSGACG00000010390	lsm7	100	97.087	ENSAPEG00000000694	lsm7	100	97.087	Amphiprion_percula
ENSGACG00000010390	lsm7	100	97.087	ENSATEG00000008557	lsm7	100	97.087	Anabas_testudineus
ENSGACG00000010390	lsm7	100	83.495	ENSANAG00000022222	-	100	83.495	Aotus_nancymaae
ENSGACG00000010390	lsm7	100	92.233	ENSANAG00000037196	-	100	92.233	Aotus_nancymaae
ENSGACG00000010390	lsm7	100	96.117	ENSACLG00000021021	lsm7	100	96.117	Astatotilapia_calliptera
ENSGACG00000010390	lsm7	100	95.146	ENSAMXG00000037622	lsm7	100	95.146	Astyanax_mexicanus
ENSGACG00000010390	lsm7	100	92.233	ENSBTAG00000004521	LSM7	100	92.233	Bos_taurus
ENSGACG00000010390	lsm7	98	57.426	WBGene00003081	lsm-7	97	57.426	Caenorhabditis_elegans
ENSGACG00000010390	lsm7	69	74.648	ENSCJAG00000039713	-	87	74.648	Callithrix_jacchus
ENSGACG00000010390	lsm7	99	93.137	ENSCAFG00000019409	LSM7	99	93.137	Canis_familiaris
ENSGACG00000010390	lsm7	99	93.137	ENSCAFG00020018168	LSM7	75	92.157	Canis_lupus_dingo
ENSGACG00000010390	lsm7	100	93.204	ENSCHIG00000023663	LSM7	100	93.204	Capra_hircus
ENSGACG00000010390	lsm7	69	94.366	ENSCAPG00000014534	LSM7	100	94.366	Cavia_aperea
ENSGACG00000010390	lsm7	100	92.233	ENSCPOG00000014025	LSM7	100	94.059	Cavia_porcellus
ENSGACG00000010390	lsm7	98	94.059	ENSCCAG00000035456	LSM7	99	94.059	Cebus_capucinus
ENSGACG00000010390	lsm7	100	92.233	ENSCATG00000023543	LSM7	100	92.233	Cercocebus_atys
ENSGACG00000010390	lsm7	100	92.233	ENSCLAG00000011635	LSM7	100	92.233	Chinchilla_lanigera
ENSGACG00000010390	lsm7	100	92.233	ENSCSAG00000011599	LSM7	100	92.233	Chlorocebus_sabaeus
ENSGACG00000010390	lsm7	70	94.444	ENSCPBG00000021317	LSM7	77	94.444	Chrysemys_picta_bellii
ENSGACG00000010390	lsm7	93	81.250	ENSCING00000022134	-	97	81.250	Ciona_intestinalis
ENSGACG00000010390	lsm7	100	92.233	ENSCANG00000035525	LSM7	100	92.233	Colobus_angolensis_palliatus
ENSGACG00000010390	lsm7	87	84.444	ENSCGRG00001016005	-	92	84.444	Cricetulus_griseus_chok1gshd
ENSGACG00000010390	lsm7	100	93.204	ENSCGRG00001000807	-	100	93.204	Cricetulus_griseus_chok1gshd
ENSGACG00000010390	lsm7	100	94.175	ENSCGRG00000014355	-	99	94.175	Cricetulus_griseus_crigri
ENSGACG00000010390	lsm7	87	84.444	ENSCGRG00000006821	-	92	84.444	Cricetulus_griseus_crigri
ENSGACG00000010390	lsm7	99	98.039	ENSCSEG00000014900	lsm7	86	99.010	Cynoglossus_semilaevis
ENSGACG00000010390	lsm7	99	97.059	ENSCVAG00000021091	lsm7	94	97.059	Cyprinodon_variegatus
ENSGACG00000010390	lsm7	100	94.175	ENSDARG00000058328	lsm7	100	94.175	Danio_rerio
ENSGACG00000010390	lsm7	98	92.079	ENSDORG00000024460	Lsm7	99	92.079	Dipodomys_ordii
ENSGACG00000010390	lsm7	94	72.449	FBgn0261068	LSm7	89	72.449	Drosophila_melanogaster
ENSGACG00000010390	lsm7	99	91.176	ENSETEG00000012788	LSM7	100	91.176	Echinops_telfairi
ENSGACG00000010390	lsm7	100	84.466	ENSEBUG00000016992	lsm7	99	84.466	Eptatretus_burgeri
ENSGACG00000010390	lsm7	81	59.036	ENSEBUG00000010470	-	79	59.036	Eptatretus_burgeri
ENSGACG00000010390	lsm7	100	90.291	ENSECAG00000001440	LSM7	66	90.291	Equus_caballus
ENSGACG00000010390	lsm7	100	91.262	ENSFCAG00000003445	LSM7	100	91.262	Felis_catus
ENSGACG00000010390	lsm7	98	96.040	ENSFALG00000011912	LSM7	100	96.040	Ficedula_albicollis
ENSGACG00000010390	lsm7	93	93.750	ENSFDAG00000007661	LSM7	100	93.750	Fukomys_damarensis
ENSGACG00000010390	lsm7	98	98.020	ENSFHEG00000006349	lsm7	90	98.020	Fundulus_heteroclitus
ENSGACG00000010390	lsm7	100	98.058	ENSGMOG00000013320	lsm7	100	98.058	Gadus_morhua
ENSGACG00000010390	lsm7	100	96.117	ENSGAFG00000013902	lsm7	100	96.117	Gambusia_affinis
ENSGACG00000010390	lsm7	100	92.233	ENSGGOG00000010172	LSM7	100	92.233	Gorilla_gorilla
ENSGACG00000010390	lsm7	100	97.087	ENSHBUG00000004616	lsm7	100	96.117	Haplochromis_burtoni
ENSGACG00000010390	lsm7	100	92.233	ENSHGLG00000010587	LSM7	100	92.233	Heterocephalus_glaber_female
ENSGACG00000010390	lsm7	100	92.233	ENSHGLG00100000852	LSM7	100	92.233	Heterocephalus_glaber_male
ENSGACG00000010390	lsm7	98	98.020	ENSHCOG00000020252	lsm7	100	98.020	Hippocampus_comes
ENSGACG00000010390	lsm7	100	95.146	ENSIPUG00000024724	lsm7	100	95.146	Ictalurus_punctatus
ENSGACG00000010390	lsm7	99	94.118	ENSSTOG00000028372	LSM7	99	94.059	Ictidomys_tridecemlineatus
ENSGACG00000010390	lsm7	97	96.000	ENSJJAG00000001936	Lsm7	97	96.000	Jaculus_jaculus
ENSGACG00000010390	lsm7	100	96.117	ENSKMAG00000022151	lsm7	100	96.117	Kryptolebias_marmoratus
ENSGACG00000010390	lsm7	100	97.087	ENSLBEG00000005203	lsm7	100	97.087	Labrus_bergylta
ENSGACG00000010390	lsm7	90	94.624	ENSLACG00000015700	LSM7	100	93.204	Latimeria_chalumnae
ENSGACG00000010390	lsm7	99	96.078	ENSLOCG00000004356	lsm7	99	96.078	Lepisosteus_oculatus
ENSGACG00000010390	lsm7	99	94.118	ENSLAFG00000029302	LSM7	99	94.118	Loxodonta_africana
ENSGACG00000010390	lsm7	100	92.233	ENSMFAG00000044572	LSM7	100	92.233	Macaca_fascicularis
ENSGACG00000010390	lsm7	100	92.233	ENSMMUG00000000452	LSM7	99	94.059	Macaca_mulatta
ENSGACG00000010390	lsm7	100	92.233	ENSMNEG00000004393	LSM7	100	92.233	Macaca_nemestrina
ENSGACG00000010390	lsm7	100	92.233	ENSMLEG00000030852	LSM7	100	94.059	Mandrillus_leucophaeus
ENSGACG00000010390	lsm7	100	96.117	ENSMAMG00000005410	lsm7	100	96.117	Mastacembelus_armatus
ENSGACG00000010390	lsm7	100	96.117	ENSMZEG00005028055	lsm7	100	96.117	Maylandia_zebra
ENSGACG00000010390	lsm7	100	94.175	ENSMGAG00000000750	LSM7	89	94.175	Meleagris_gallopavo
ENSGACG00000010390	lsm7	100	94.175	ENSMAUG00000009276	Lsm7	100	94.175	Mesocricetus_auratus
ENSGACG00000010390	lsm7	100	92.233	ENSMICG00000028619	-	100	92.233	Microcebus_murinus
ENSGACG00000010390	lsm7	100	92.233	ENSMICG00000009988	-	100	92.233	Microcebus_murinus
ENSGACG00000010390	lsm7	100	93.204	ENSMOCG00000016925	Lsm7	100	93.204	Microtus_ochrogaster
ENSGACG00000010390	lsm7	100	97.087	ENSMMOG00000019645	lsm7	98	97.087	Mola_mola
ENSGACG00000010390	lsm7	100	93.204	ENSMODG00000004722	LSM7	100	93.204	Monodelphis_domestica
ENSGACG00000010390	lsm7	100	96.117	ENSMALG00000014511	lsm7	79	96.117	Monopterus_albus
ENSGACG00000010390	lsm7	99	93.137	MGP_CAROLIEiJ_G0015607	Lsm7	99	93.137	Mus_caroli
ENSGACG00000010390	lsm7	99	93.137	ENSMUSG00000035215	Lsm7	99	93.137	Mus_musculus
ENSGACG00000010390	lsm7	99	93.137	MGP_PahariEiJ_G0031020	Lsm7	99	93.137	Mus_pahari
ENSGACG00000010390	lsm7	99	93.137	MGP_SPRETEiJ_G0016425	Lsm7	99	93.137	Mus_spretus
ENSGACG00000010390	lsm7	99	86.275	ENSMLUG00000024002	-	94	86.275	Myotis_lucifugus
ENSGACG00000010390	lsm7	100	92.233	ENSMLUG00000013097	-	100	92.233	Myotis_lucifugus
ENSGACG00000010390	lsm7	100	92.233	ENSNGAG00000021637	Lsm7	100	92.233	Nannospalax_galili
ENSGACG00000010390	lsm7	100	97.087	ENSNBRG00000015770	lsm7	89	97.087	Neolamprologus_brichardi
ENSGACG00000010390	lsm7	98	98.020	ENSNBRG00000001237	-	81	98.020	Neolamprologus_brichardi
ENSGACG00000010390	lsm7	100	92.233	ENSNLEG00000002265	LSM7	100	92.233	Nomascus_leucogenys
ENSGACG00000010390	lsm7	100	92.233	ENSODEG00000013590	-	100	92.233	Octodon_degus
ENSGACG00000010390	lsm7	100	85.437	ENSODEG00000018769	-	100	85.437	Octodon_degus
ENSGACG00000010390	lsm7	100	72.816	ENSODEG00000008190	-	100	72.816	Octodon_degus
ENSGACG00000010390	lsm7	100	96.117	ENSONIG00000001801	lsm7	89	96.117	Oreochromis_niloticus
ENSGACG00000010390	lsm7	100	98.058	ENSORLG00000023951	lsm7	100	97.087	Oryzias_latipes
ENSGACG00000010390	lsm7	100	98.058	ENSORLG00020022226	lsm7	100	97.087	Oryzias_latipes_hni
ENSGACG00000010390	lsm7	100	98.058	ENSORLG00015020044	lsm7	94	98.039	Oryzias_latipes_hsok
ENSGACG00000010390	lsm7	100	97.087	ENSOMEG00000012806	lsm7	100	97.087	Oryzias_melastigma
ENSGACG00000010390	lsm7	99	94.118	ENSOGAG00000000144	-	100	94.118	Otolemur_garnettii
ENSGACG00000010390	lsm7	100	82.524	ENSOGAG00000024373	-	100	82.524	Otolemur_garnettii
ENSGACG00000010390	lsm7	100	93.204	ENSOARG00000014013	LSM7	100	93.204	Ovis_aries
ENSGACG00000010390	lsm7	100	92.233	ENSPPAG00000026500	LSM7	100	92.233	Pan_paniscus
ENSGACG00000010390	lsm7	100	91.262	ENSPPRG00000008624	LSM7	100	91.262	Panthera_pardus
ENSGACG00000010390	lsm7	98	93.069	ENSPTIG00000016252	LSM7	98	93.069	Panthera_tigris_altaica
ENSGACG00000010390	lsm7	100	92.233	ENSPTRG00000010233	LSM7	100	92.233	Pan_troglodytes
ENSGACG00000010390	lsm7	100	92.233	ENSPANG00000020668	LSM7	100	92.233	Papio_anubis
ENSGACG00000010390	lsm7	100	95.146	ENSPKIG00000011325	lsm7	100	95.146	Paramormyrops_kingsleyae
ENSGACG00000010390	lsm7	98	96.040	ENSPSIG00000017149	LSM7	89	96.040	Pelodiscus_sinensis
ENSGACG00000010390	lsm7	100	97.087	ENSPMGG00000006498	lsm7	100	97.087	Periophthalmus_magnuspinnatus
ENSGACG00000010390	lsm7	100	93.204	ENSPCIG00000030454	LSM7	99	95.050	Phascolarctos_cinereus
ENSGACG00000010390	lsm7	100	96.117	ENSPFOG00000012467	lsm7	91	96.117	Poecilia_formosa
ENSGACG00000010390	lsm7	100	96.117	ENSPLAG00000000252	lsm7	94	97.030	Poecilia_latipinna
ENSGACG00000010390	lsm7	100	96.117	ENSPMEG00000000587	lsm7	94	97.030	Poecilia_mexicana
ENSGACG00000010390	lsm7	78	75.309	ENSPREG00000016718	lsm7	65	75.309	Poecilia_reticulata
ENSGACG00000010390	lsm7	98	74.257	ENSPPYG00000009348	-	67	74.257	Pongo_abelii
ENSGACG00000010390	lsm7	100	92.233	ENSPCOG00000017177	LSM7	99	94.059	Propithecus_coquereli
ENSGACG00000010390	lsm7	100	96.117	ENSPNYG00000006938	lsm7	100	96.117	Pundamilia_nyererei
ENSGACG00000010390	lsm7	100	95.146	ENSPNAG00000010141	lsm7	99	97.030	Pygocentrus_nattereri
ENSGACG00000010390	lsm7	99	94.118	ENSRNOG00000019552	Lsm7	99	94.118	Rattus_norvegicus
ENSGACG00000010390	lsm7	100	92.233	ENSRBIG00000035978	LSM7	100	92.233	Rhinopithecus_bieti
ENSGACG00000010390	lsm7	100	92.233	ENSRROG00000034044	LSM7	100	92.233	Rhinopithecus_roxellana
ENSGACG00000010390	lsm7	83	48.315	YNL147W	-	77	48.315	Saccharomyces_cerevisiae
ENSGACG00000010390	lsm7	100	92.233	ENSSBOG00000034899	LSM7	100	92.233	Saimiri_boliviensis_boliviensis
ENSGACG00000010390	lsm7	100	93.204	ENSSFOG00015006728	lsm7	100	93.204	Scleropages_formosus
ENSGACG00000010390	lsm7	100	99.029	ENSSMAG00000004195	lsm7	94	99.029	Scophthalmus_maximus
ENSGACG00000010390	lsm7	100	97.087	ENSSDUG00000001863	lsm7	100	97.087	Seriola_dumerili
ENSGACG00000010390	lsm7	100	97.087	ENSSLDG00000016339	lsm7	100	97.087	Seriola_lalandi_dorsalis
ENSGACG00000010390	lsm7	100	97.087	ENSSPAG00000015221	lsm7	100	97.087	Stegastes_partitus
ENSGACG00000010390	lsm7	98	94.059	ENSSSCG00000013463	LSM7	99	94.059	Sus_scrofa
ENSGACG00000010390	lsm7	98	96.040	ENSTGUG00000000067	LSM7	100	96.040	Taeniopygia_guttata
ENSGACG00000010390	lsm7	100	95.146	ENSTRUG00000022913	lsm7	100	95.146	Takifugu_rubripes
ENSGACG00000010390	lsm7	100	95.146	ENSTNIG00000015525	lsm7	100	95.146	Tetraodon_nigroviridis
ENSGACG00000010390	lsm7	68	82.857	ENSTBEG00000016602	LSM7	100	82.857	Tupaia_belangeri
ENSGACG00000010390	lsm7	100	92.233	ENSUAMG00000000912	LSM7	86	92.233	Ursus_americanus
ENSGACG00000010390	lsm7	99	92.157	ENSUMAG00000006556	LSM7	79	93.069	Ursus_maritimus
ENSGACG00000010390	lsm7	69	92.958	ENSVVUG00000002640	LSM7	65	92.958	Vulpes_vulpes
ENSGACG00000010390	lsm7	98	96.040	ENSXETG00000022166	lsm7	100	96.040	Xenopus_tropicalis
ENSGACG00000010390	lsm7	98	98.020	ENSXCOG00000002572	lsm7	99	98.020	Xiphophorus_couchianus
ENSGACG00000010390	lsm7	100	97.087	ENSXMAG00000018630	lsm7	100	96.117	Xiphophorus_maculatus