EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000010726 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4627 bases
Position: chrgroupXX:12372573-12377199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014202	zf-CCCH	PF00642.24	5.7e-05	1	1
ENSGACP00000014200	AKAP7_NLS	PF10469.9	3.5e-17	1	1
ENSGACP00000014202	AKAP7_NLS	PF10469.9	4.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014225	-	1735	-	ENSGACP00000014200	444 (aa)	-	G3P9C6
ENSGACT00000014227	-	1500	-	ENSGACP00000014202	499 (aa)	-	G3P9C8

Gene Model

Click here to download ENSGACG00000010726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010726	-	96	30.474	ENSG00000275183	LENG9	92	31.070	Homo_sapiens
ENSGACG00000010726	-	100	57.623	ENSAPOG00000016038	-	95	69.302	Acanthochromis_polyacanthus
ENSGACG00000010726	-	100	55.605	ENSACIG00000006238	-	100	55.263	Amphilophus_citrinellus
ENSGACG00000010726	-	100	57.623	ENSAOCG00000012343	-	92	55.577	Amphiprion_ocellaris
ENSGACG00000010726	-	100	57.623	ENSAPEG00000008438	-	92	55.766	Amphiprion_percula
ENSGACG00000010726	-	100	62.022	ENSATEG00000022575	-	97	60.800	Anabas_testudineus
ENSGACG00000010726	-	95	30.943	ENSACAG00000016906	LENG9	88	30.943	Anolis_carolinensis
ENSGACG00000010726	-	100	67.261	ENSACLG00000021615	-	93	61.582	Astatotilapia_calliptera
ENSGACG00000010726	-	99	42.857	ENSAMXG00000041663	-	88	41.406	Astyanax_mexicanus
ENSGACG00000010726	-	65	59.302	ENSBTAG00000011693	LENG9	95	30.467	Bos_taurus
ENSGACG00000010726	-	71	45.055	ENSCING00000013747	-	94	46.316	Ciona_intestinalis
ENSGACG00000010726	-	96	31.223	ENSCGRG00001004238	Leng9	94	32.394	Cricetulus_griseus_chok1gshd
ENSGACG00000010726	-	100	54.343	ENSCSEG00000018718	-	100	53.704	Cynoglossus_semilaevis
ENSGACG00000010726	-	100	58.837	ENSCVAG00000007812	-	97	55.769	Cyprinodon_variegatus
ENSGACG00000010726	-	99	42.424	ENSDARG00000062374	leng9	95	40.741	Danio_rerio
ENSGACG00000010726	-	99	31.102	ENSDNOG00000005144	LENG9	96	31.423	Dasypus_novemcinctus
ENSGACG00000010726	-	99	32.972	ENSEASG00005021529	LENG9	99	33.532	Equus_asinus_asinus
ENSGACG00000010726	-	99	32.972	ENSECAG00000018281	LENG9	95	33.532	Equus_caballus
ENSGACG00000010726	-	100	56.608	ENSELUG00000015268	-	91	52.799	Esox_lucius
ENSGACG00000010726	-	80	65.728	ENSGMOG00000004924	leng9	98	65.728	Gadus_morhua
ENSGACG00000010726	-	100	61.062	ENSGAFG00000013280	-	91	56.343	Gambusia_affinis
ENSGACG00000010726	-	63	52.222	ENSGAGG00000018912	LENG9	73	48.529	Gopherus_agassizii
ENSGACG00000010726	-	100	66.593	ENSHBUG00000013531	-	93	61.049	Haplochromis_burtoni
ENSGACG00000010726	-	100	58.427	ENSHCOG00000020683	-	95	55.172	Hippocampus_comes
ENSGACG00000010726	-	99	41.216	ENSIPUG00000008163	leng9	91	39.272	Ictalurus_punctatus
ENSGACG00000010726	-	100	64.494	ENSKMAG00000005354	-	100	59.961	Kryptolebias_marmoratus
ENSGACG00000010726	-	100	67.849	ENSLBEG00000016902	-	93	62.970	Labrus_bergylta
ENSGACG00000010726	-	100	68.904	ENSMAMG00000019552	-	91	63.585	Mastacembelus_armatus
ENSGACG00000010726	-	100	67.261	ENSMZEG00005016430	-	93	61.582	Maylandia_zebra
ENSGACG00000010726	-	100	54.831	ENSMMOG00000016554	-	96	53.772	Mola_mola
ENSGACG00000010726	-	96	33.632	MGP_CAROLIEiJ_G0029106	Leng9	95	34.560	Mus_caroli
ENSGACG00000010726	-	96	33.000	ENSMUSG00000043432	Leng9	97	33.400	Mus_musculus
ENSGACG00000010726	-	96	32.329	MGP_PahariEiJ_G0020974	Leng9	97	32.731	Mus_pahari
ENSGACG00000010726	-	96	32.998	MGP_SPRETEiJ_G0030159	Leng9	97	33.199	Mus_spretus
ENSGACG00000010726	-	88	32.512	ENSMPUG00000018631	LENG9	89	32.883	Mustela_putorius_furo
ENSGACG00000010726	-	100	62.723	ENSNBRG00000003056	-	100	61.829	Neolamprologus_brichardi
ENSGACG00000010726	-	96	30.206	ENSNLEG00000019192	LENG9	90	30.206	Nomascus_leucogenys
ENSGACG00000010726	-	99	65.217	ENSONIG00000012767	-	86	82.418	Oreochromis_niloticus
ENSGACG00000010726	-	59	56.818	ENSOANG00000005166	-	83	51.538	Ornithorhynchus_anatinus
ENSGACG00000010726	-	100	61.863	ENSORLG00000011328	-	91	58.126	Oryzias_latipes
ENSGACG00000010726	-	100	61.197	ENSORLG00020007474	-	91	57.553	Oryzias_latipes_hni
ENSGACG00000010726	-	100	61.348	ENSORLG00015013245	-	91	57.640	Oryzias_latipes_hsok
ENSGACG00000010726	-	100	59.556	ENSOMEG00000010765	-	92	56.415	Oryzias_melastigma
ENSGACG00000010726	-	75	31.746	ENSPPRG00000012303	LENG9	96	30.754	Panthera_pardus
ENSGACG00000010726	-	96	30.700	ENSPTRG00000050721	-	88	31.276	Pan_troglodytes
ENSGACG00000010726	-	96	30.926	ENSPTRG00000011460	-	88	31.481	Pan_troglodytes
ENSGACG00000010726	-	100	41.118	ENSPKIG00000012289	-	94	39.298	Paramormyrops_kingsleyae
ENSGACG00000010726	-	98	57.931	ENSPMGG00000012138	-	84	76.316	Periophthalmus_magnuspinnatus
ENSGACG00000010726	-	96	32.604	ENSPEMG00000006776	Leng9	97	32.604	Peromyscus_maniculatus_bairdii
ENSGACG00000010726	-	100	61.283	ENSPFOG00000009984	-	91	56.075	Poecilia_formosa
ENSGACG00000010726	-	100	60.841	ENSPLAG00000012683	-	91	55.701	Poecilia_latipinna
ENSGACG00000010726	-	100	61.504	ENSPMEG00000017453	-	91	56.903	Poecilia_mexicana
ENSGACG00000010726	-	100	56.982	ENSPREG00000008082	-	95	54.070	Poecilia_reticulata
ENSGACG00000010726	-	96	30.645	ENSPPYG00000010383	LENG9	92	31.237	Pongo_abelii
ENSGACG00000010726	-	100	30.874	ENSPCAG00000005749	LENG9	99	30.874	Procavia_capensis
ENSGACG00000010726	-	100	66.592	ENSPNYG00000001936	-	93	61.205	Pundamilia_nyererei
ENSGACG00000010726	-	99	39.286	ENSPNAG00000003520	-	95	41.923	Pygocentrus_nattereri
ENSGACG00000010726	-	96	32.009	ENSRNOG00000018621	Leng9	97	33.136	Rattus_norvegicus
ENSGACG00000010726	-	99	41.127	ENSSFOG00015000816	-	92	38.998	Scleropages_formosus
ENSGACG00000010726	-	100	69.011	ENSSMAG00000012988	-	93	63.031	Scophthalmus_maximus
ENSGACG00000010726	-	88	67.259	ENSSDUG00000008877	-	88	61.378	Seriola_dumerili
ENSGACG00000010726	-	91	64.234	ENSSLDG00000022376	-	88	59.274	Seriola_lalandi_dorsalis
ENSGACG00000010726	-	63	52.174	ENSSPUG00000002762	LENG9	55	52.174	Sphenodon_punctatus
ENSGACG00000010726	-	99	59.955	ENSSPAG00000016516	-	95	58.383	Stegastes_partitus
ENSGACG00000010726	-	100	53.153	ENSTRUG00000016004	-	99	52.941	Takifugu_rubripes
ENSGACG00000010726	-	100	61.261	ENSTNIG00000008093	-	99	69.167	Tetraodon_nigroviridis
ENSGACG00000010726	-	99	31.250	ENSTTRG00000006593	LENG9	95	32.411	Tursiops_truncatus
ENSGACG00000010726	-	73	34.699	ENSUAMG00000009573	LENG9	82	33.860	Ursus_americanus
ENSGACG00000010726	-	64	52.747	ENSXETG00000027476	leng9	78	49.275	Xenopus_tropicalis
ENSGACG00000010726	-	86	70.892	ENSXCOG00000019442	-	100	72.330	Xiphophorus_couchianus
ENSGACG00000010726	-	100	61.283	ENSXMAG00000023792	-	91	56.157	Xiphophorus_maculatus