EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000010757 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 8274 bases
Position: chrgroupXX:12408945-12417218
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014234	Fox-1_C	PF12414.8	2e-32	1	1
ENSGACP00000014234	RRM_1	PF00076.22	3.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014259	-	1152	-	ENSGACP00000014234	383 (aa)	-	G3P9G0

Gene Model

Click here to download ENSGACG00000010757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000010757	rbfox1l	64	48.780	ENSGACG00000007174	-	74	48.084
ENSGACG00000010757	rbfox1l	80	52.909	ENSGACG00000002138	-	93	52.486
ENSGACG00000010757	rbfox1l	76	49.263	ENSGACG00000015968	rbfox2	85	48.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010757	rbfox1l	97	88.949	ENSAPOG00000016304	rbfox1l	98	88.410	Acanthochromis_polyacanthus
ENSGACG00000010757	rbfox1l	100	82.507	ENSACIG00000006441	rbfox1l	100	82.507	Amphilophus_citrinellus
ENSGACG00000010757	rbfox1l	88	85.503	ENSAOCG00000020938	rbfox1l	100	84.911	Amphiprion_ocellaris
ENSGACG00000010757	rbfox1l	100	89.556	ENSAPEG00000008232	rbfox1l	100	89.034	Amphiprion_percula
ENSGACG00000010757	rbfox1l	100	87.206	ENSATEG00000022649	rbfox1l	100	87.206	Anabas_testudineus
ENSGACG00000010757	rbfox1l	64	70.751	ENSACAG00000011931	-	91	71.146	Anolis_carolinensis
ENSGACG00000010757	rbfox1l	100	87.990	ENSACLG00000021394	rbfox1l	100	87.990	Astatotilapia_calliptera
ENSGACG00000010757	rbfox1l	100	85.751	ENSAMXG00000010470	rbfox1l	100	86.010	Astyanax_mexicanus
ENSGACG00000010757	rbfox1l	100	56.122	ENSCPBG00000010944	-	100	57.692	Chrysemys_picta_bellii
ENSGACG00000010757	rbfox1l	100	87.760	ENSCSEG00000018898	rbfox1l	100	88.021	Cynoglossus_semilaevis
ENSGACG00000010757	rbfox1l	100	87.467	ENSCVAG00000007986	rbfox1l	100	87.206	Cyprinodon_variegatus
ENSGACG00000010757	rbfox1l	100	83.938	ENSDARG00000021184	rbfox1l	100	84.456	Danio_rerio
ENSGACG00000010757	rbfox1l	100	81.934	ENSELUG00000015077	rbfox1l	100	83.461	Esox_lucius
ENSGACG00000010757	rbfox1l	79	90.244	ENSFHEG00000016557	rbfox1l	95	90.244	Fundulus_heteroclitus
ENSGACG00000010757	rbfox1l	100	84.595	ENSGMOG00000005040	rbfox1l	100	84.595	Gadus_morhua
ENSGACG00000010757	rbfox1l	92	86.441	ENSGAFG00000013211	rbfox1l	97	86.441	Gambusia_affinis
ENSGACG00000010757	rbfox1l	64	68.675	ENSGAGG00000012440	-	86	71.200	Gopherus_agassizii
ENSGACG00000010757	rbfox1l	100	87.990	ENSHBUG00000013406	rbfox1l	100	87.990	Haplochromis_burtoni
ENSGACG00000010757	rbfox1l	100	85.156	ENSHCOG00000020771	rbfox1l	100	85.417	Hippocampus_comes
ENSGACG00000010757	rbfox1l	99	79.319	ENSIPUG00000000065	rbfox1l	99	80.726	Ictalurus_punctatus
ENSGACG00000010757	rbfox1l	100	86.494	ENSKMAG00000005146	rbfox1l	100	86.753	Kryptolebias_marmoratus
ENSGACG00000010757	rbfox1l	100	91.123	ENSLBEG00000017089	rbfox1l	100	91.123	Labrus_bergylta
ENSGACG00000010757	rbfox1l	100	89.556	ENSMAMG00000019480	rbfox1l	100	89.556	Mastacembelus_armatus
ENSGACG00000010757	rbfox1l	100	87.990	ENSMZEG00005016374	rbfox1l	100	87.990	Maylandia_zebra
ENSGACG00000010757	rbfox1l	100	88.773	ENSMMOG00000016530	rbfox1l	100	88.773	Mola_mola
ENSGACG00000010757	rbfox1l	100	85.379	ENSMALG00000009384	rbfox1l	100	85.117	Monopterus_albus
ENSGACG00000010757	rbfox1l	100	87.728	ENSNBRG00000003346	rbfox1l	100	87.728	Neolamprologus_brichardi
ENSGACG00000010757	rbfox1l	100	88.512	ENSONIG00000012754	rbfox1l	100	88.512	Oreochromis_niloticus
ENSGACG00000010757	rbfox1l	100	87.206	ENSORLG00000011269	rbfox1l	100	86.684	Oryzias_latipes
ENSGACG00000010757	rbfox1l	100	87.990	ENSORLG00020000162	rbfox1l	100	87.467	Oryzias_latipes_hni
ENSGACG00000010757	rbfox1l	100	87.467	ENSORLG00015013464	rbfox1l	100	86.945	Oryzias_latipes_hsok
ENSGACG00000010757	rbfox1l	100	87.728	ENSOMEG00000010584	rbfox1l	100	87.206	Oryzias_melastigma
ENSGACG00000010757	rbfox1l	100	86.719	ENSPKIG00000012029	rbfox1l	100	86.979	Paramormyrops_kingsleyae
ENSGACG00000010757	rbfox1l	100	80.208	ENSPMGG00000012082	rbfox1l	100	79.427	Periophthalmus_magnuspinnatus
ENSGACG00000010757	rbfox1l	100	87.728	ENSPFOG00000009338	rbfox1l	100	87.728	Poecilia_formosa
ENSGACG00000010757	rbfox1l	85	78.593	ENSPLAG00000012816	rbfox1l	99	78.593	Poecilia_latipinna
ENSGACG00000010757	rbfox1l	100	84.595	ENSPMEG00000017597	rbfox1l	100	84.595	Poecilia_mexicana
ENSGACG00000010757	rbfox1l	100	84.856	ENSPREG00000007940	rbfox1l	100	84.856	Poecilia_reticulata
ENSGACG00000010757	rbfox1l	100	87.728	ENSPNYG00000002098	rbfox1l	100	87.728	Pundamilia_nyererei
ENSGACG00000010757	rbfox1l	100	84.755	ENSPNAG00000001620	rbfox1l	100	83.721	Pygocentrus_nattereri
ENSGACG00000010757	rbfox1l	100	81.818	ENSSFOG00015000675	rbfox1l	100	82.338	Scleropages_formosus
ENSGACG00000010757	rbfox1l	100	89.817	ENSSMAG00000013090	rbfox1l	100	89.817	Scophthalmus_maximus
ENSGACG00000010757	rbfox1l	100	86.889	ENSSDUG00000008705	rbfox1l	100	86.889	Seriola_dumerili
ENSGACG00000010757	rbfox1l	100	87.113	ENSSLDG00000022256	rbfox1l	100	87.113	Seriola_lalandi_dorsalis
ENSGACG00000010757	rbfox1l	100	89.556	ENSSPAG00000016620	rbfox1l	100	89.034	Stegastes_partitus
ENSGACG00000010757	rbfox1l	96	85.405	ENSTRUG00000015905	rbfox1l	100	85.676	Takifugu_rubripes
ENSGACG00000010757	rbfox1l	65	80.669	ENSTNIG00000008088	rbfox1l	99	82.463	Tetraodon_nigroviridis
ENSGACG00000010757	rbfox1l	100	88.773	ENSXMAG00000023471	rbfox1l	100	88.773	Xiphophorus_maculatus