EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000010794 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 31194 bases
Position: chrgroupVI:13691211-13722404
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014292	S1	PF00575.23	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014317	-	1875	-	ENSGACP00000014292	625 (aa)	-	G3P9L8

Gene Model

Click here to download ENSGACG00000010794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010794	si:ch211-117n7.8	100	60.480	ENSG00000068784	SRBD1	62	60.320	Homo_sapiens
ENSGACG00000010794	si:ch211-117n7.8	100	81.747	ENSAPOG00000005103	si:ch211-117n7.8	62	83.151	Acanthochromis_polyacanthus
ENSGACG00000010794	si:ch211-117n7.8	100	61.280	ENSAMEG00000005993	SRBD1	63	61.120	Ailuropoda_melanoleuca
ENSGACG00000010794	si:ch211-117n7.8	100	82.326	ENSACIG00000009875	si:ch211-117n7.8	63	82.171	Amphilophus_citrinellus
ENSGACG00000010794	si:ch211-117n7.8	100	80.343	ENSAOCG00000024718	si:ch211-117n7.8	63	82.059	Amphiprion_ocellaris
ENSGACG00000010794	si:ch211-117n7.8	100	81.435	ENSAPEG00000002645	si:ch211-117n7.8	65	81.435	Amphiprion_percula
ENSGACG00000010794	si:ch211-117n7.8	100	82.481	ENSATEG00000010844	si:ch211-117n7.8	63	82.481	Anabas_testudineus
ENSGACG00000010794	si:ch211-117n7.8	100	61.830	ENSAPLG00000006313	SRBD1	63	60.754	Anas_platyrhynchos
ENSGACG00000010794	si:ch211-117n7.8	50	57.233	ENSACAG00000003811	-	100	56.604	Anolis_carolinensis
ENSGACG00000010794	si:ch211-117n7.8	100	60.960	ENSANAG00000025573	SRBD1	62	60.800	Aotus_nancymaae
ENSGACG00000010794	si:ch211-117n7.8	100	84.292	ENSACLG00000024219	si:ch211-117n7.8	61	84.292	Astatotilapia_calliptera
ENSGACG00000010794	si:ch211-117n7.8	100	72.240	ENSAMXG00000004294	SRBD1	62	72.397	Astyanax_mexicanus
ENSGACG00000010794	si:ch211-117n7.8	100	61.600	ENSBTAG00000007508	SRBD1	59	68.159	Bos_taurus
ENSGACG00000010794	si:ch211-117n7.8	89	30.139	WBGene00022830	ZK973.1	68	31.065	Caenorhabditis_elegans
ENSGACG00000010794	si:ch211-117n7.8	100	60.960	ENSCJAG00000000727	SRBD1	62	60.640	Callithrix_jacchus
ENSGACG00000010794	si:ch211-117n7.8	100	61.244	ENSCAFG00000002554	SRBD1	63	61.085	Canis_familiaris
ENSGACG00000010794	si:ch211-117n7.8	100	61.920	ENSCAFG00020026284	SRBD1	91	53.503	Canis_lupus_dingo
ENSGACG00000010794	si:ch211-117n7.8	100	61.920	ENSCHIG00000016535	SRBD1	62	61.760	Capra_hircus
ENSGACG00000010794	si:ch211-117n7.8	100	61.404	ENSTSYG00000012797	SRBD1	62	61.182	Carlito_syrichta
ENSGACG00000010794	si:ch211-117n7.8	100	60.640	ENSCPOG00000004773	SRBD1	63	60.064	Cavia_porcellus
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSCCAG00000025589	SRBD1	62	60.640	Cebus_capucinus
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSCATG00000039530	SRBD1	62	60.640	Cercocebus_atys
ENSGACG00000010794	si:ch211-117n7.8	100	61.440	ENSCLAG00000008623	SRBD1	63	60.800	Chinchilla_lanigera
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSCSAG00000013350	SRBD1	62	60.640	Chlorocebus_sabaeus
ENSGACG00000010794	si:ch211-117n7.8	100	61.014	ENSCPBG00000005677	SRBD1	63	61.342	Chrysemys_picta_bellii
ENSGACG00000010794	si:ch211-117n7.8	99	41.853	ENSCING00000005950	-	78	41.534	Ciona_intestinalis
ENSGACG00000010794	si:ch211-117n7.8	99	42.971	ENSCSAVG00000000861	-	76	42.971	Ciona_savignyi
ENSGACG00000010794	si:ch211-117n7.8	100	60.640	ENSCANG00000016307	SRBD1	62	60.480	Colobus_angolensis_palliatus
ENSGACG00000010794	si:ch211-117n7.8	100	60.160	ENSCGRG00001000513	Srbd1	62	60.160	Cricetulus_griseus_chok1gshd
ENSGACG00000010794	si:ch211-117n7.8	100	60.160	ENSCGRG00000002283	Srbd1	62	60.160	Cricetulus_griseus_crigri
ENSGACG00000010794	si:ch211-117n7.8	100	76.625	ENSCSEG00000000856	si:ch211-117n7.8	63	76.827	Cynoglossus_semilaevis
ENSGACG00000010794	si:ch211-117n7.8	100	81.931	ENSCVAG00000020212	si:ch211-117n7.8	66	81.931	Cyprinodon_variegatus
ENSGACG00000010794	si:ch211-117n7.8	100	59.936	ENSDNOG00000018686	SRBD1	62	60.510	Dasypus_novemcinctus
ENSGACG00000010794	si:ch211-117n7.8	100	59.840	ENSDORG00000010468	Srbd1	62	59.840	Dipodomys_ordii
ENSGACG00000010794	si:ch211-117n7.8	95	36.789	FBgn0051156	CG31156	57	36.789	Drosophila_melanogaster
ENSGACG00000010794	si:ch211-117n7.8	90	55.851	ENSETEG00000000739	SRBD1	57	55.851	Echinops_telfairi
ENSGACG00000010794	si:ch211-117n7.8	100	48.428	ENSEBUG00000008902	si:ch211-117n7.8	82	48.113	Eptatretus_burgeri
ENSGACG00000010794	si:ch211-117n7.8	100	61.920	ENSEASG00005003132	SRBD1	98	54.093	Equus_asinus_asinus
ENSGACG00000010794	si:ch211-117n7.8	100	61.760	ENSECAG00000013865	SRBD1	61	61.920	Equus_caballus
ENSGACG00000010794	si:ch211-117n7.8	100	74.648	ENSELUG00000012592	si:ch211-117n7.8	60	74.254	Esox_lucius
ENSGACG00000010794	si:ch211-117n7.8	100	61.600	ENSFCAG00000005101	SRBD1	62	61.440	Felis_catus
ENSGACG00000010794	si:ch211-117n7.8	100	60.320	ENSFALG00000012966	SRBD1	63	60.320	Ficedula_albicollis
ENSGACG00000010794	si:ch211-117n7.8	100	60.960	ENSFDAG00000016670	SRBD1	63	60.800	Fukomys_damarensis
ENSGACG00000010794	si:ch211-117n7.8	100	81.931	ENSFHEG00000019480	si:ch211-117n7.8	61	81.620	Fundulus_heteroclitus
ENSGACG00000010794	si:ch211-117n7.8	80	74.194	ENSGMOG00000018010	-	100	74.194	Gadus_morhua
ENSGACG00000010794	si:ch211-117n7.8	100	61.270	ENSGALG00000009990	SRBD1	63	60.568	Gallus_gallus
ENSGACG00000010794	si:ch211-117n7.8	100	81.308	ENSGAFG00000019664	si:ch211-117n7.8	62	81.308	Gambusia_affinis
ENSGACG00000010794	si:ch211-117n7.8	95	68.208	ENSGAGG00000006166	SRBD1	74	61.661	Gopherus_agassizii
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSGGOG00000005910	SRBD1	64	60.640	Gorilla_gorilla
ENSGACG00000010794	si:ch211-117n7.8	94	81.058	ENSHBUG00000013207	si:ch211-117n7.8	61	81.058	Haplochromis_burtoni
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSHGLG00000018153	-	63	60.320	Heterocephalus_glaber_female
ENSGACG00000010794	si:ch211-117n7.8	100	61.120	ENSHGLG00100015183	-	63	60.320	Heterocephalus_glaber_male
ENSGACG00000010794	si:ch211-117n7.8	100	71.677	ENSIPUG00000009661	srbd1	63	70.774	Ictalurus_punctatus
ENSGACG00000010794	si:ch211-117n7.8	100	61.760	ENSSTOG00000005898	SRBD1	63	61.440	Ictidomys_tridecemlineatus
ENSGACG00000010794	si:ch211-117n7.8	100	57.920	ENSJJAG00000022244	Srbd1	62	57.600	Jaculus_jaculus
ENSGACG00000010794	si:ch211-117n7.8	100	83.022	ENSKMAG00000003473	si:ch211-117n7.8	62	83.022	Kryptolebias_marmoratus
ENSGACG00000010794	si:ch211-117n7.8	100	83.072	ENSLBEG00000027518	si:ch211-117n7.8	61	83.072	Labrus_bergylta
ENSGACG00000010794	si:ch211-117n7.8	100	61.182	ENSLACG00000009790	SRBD1	73	61.182	Latimeria_chalumnae
ENSGACG00000010794	si:ch211-117n7.8	100	69.194	ENSLOCG00000016360	si:ch211-117n7.8	63	68.404	Lepisosteus_oculatus
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSMFAG00000042026	SRBD1	62	60.640	Macaca_fascicularis
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSMMUG00000003490	SRBD1	62	60.640	Macaca_mulatta
ENSGACG00000010794	si:ch211-117n7.8	100	58.560	ENSMNEG00000034701	SRBD1	62	58.400	Macaca_nemestrina
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSMLEG00000000745	SRBD1	62	60.640	Mandrillus_leucophaeus
ENSGACG00000010794	si:ch211-117n7.8	100	82.609	ENSMAMG00000021921	si:ch211-117n7.8	63	82.609	Mastacembelus_armatus
ENSGACG00000010794	si:ch211-117n7.8	100	84.292	ENSMZEG00005027369	si:ch211-117n7.8	61	84.292	Maylandia_zebra
ENSGACG00000010794	si:ch211-117n7.8	100	61.821	ENSMGAG00000010273	SRBD1	78	61.821	Meleagris_gallopavo
ENSGACG00000010794	si:ch211-117n7.8	100	57.339	ENSMAUG00000013916	Srbd1	77	57.339	Mesocricetus_auratus
ENSGACG00000010794	si:ch211-117n7.8	100	62.240	ENSMICG00000007835	SRBD1	62	62.080	Microcebus_murinus
ENSGACG00000010794	si:ch211-117n7.8	100	59.425	ENSMOCG00000018716	Srbd1	62	59.425	Microtus_ochrogaster
ENSGACG00000010794	si:ch211-117n7.8	100	79.782	ENSMMOG00000007507	si:ch211-117n7.8	65	79.782	Mola_mola
ENSGACG00000010794	si:ch211-117n7.8	100	82.636	ENSMALG00000001562	si:ch211-117n7.8	62	82.636	Monopterus_albus
ENSGACG00000010794	si:ch211-117n7.8	100	59.520	MGP_CAROLIEiJ_G0021934	Srbd1	99	54.459	Mus_caroli
ENSGACG00000010794	si:ch211-117n7.8	100	59.680	ENSMUSG00000024135	Srbd1	99	51.220	Mus_musculus
ENSGACG00000010794	si:ch211-117n7.8	100	59.554	MGP_PahariEiJ_G0020924	Srbd1	62	59.360	Mus_pahari
ENSGACG00000010794	si:ch211-117n7.8	100	59.680	MGP_SPRETEiJ_G0022850	Srbd1	62	59.680	Mus_spretus
ENSGACG00000010794	si:ch211-117n7.8	100	61.342	ENSMLUG00000007039	SRBD1	62	60.979	Myotis_lucifugus
ENSGACG00000010794	si:ch211-117n7.8	100	57.669	ENSNGAG00000011893	Srbd1	63	57.669	Nannospalax_galili
ENSGACG00000010794	si:ch211-117n7.8	100	85.918	ENSNBRG00000012873	si:ch211-117n7.8	64	85.918	Neolamprologus_brichardi
ENSGACG00000010794	si:ch211-117n7.8	100	60.640	ENSNLEG00000016877	SRBD1	62	60.480	Nomascus_leucogenys
ENSGACG00000010794	si:ch211-117n7.8	100	59.840	ENSODEG00000012095	SRBD1	63	58.560	Octodon_degus
ENSGACG00000010794	si:ch211-117n7.8	100	87.040	ENSONIG00000000945	si:ch211-117n7.8	75	87.040	Oreochromis_niloticus
ENSGACG00000010794	si:ch211-117n7.8	100	61.600	ENSOCUG00000015385	SRBD1	63	61.440	Oryctolagus_cuniculus
ENSGACG00000010794	si:ch211-117n7.8	100	74.961	ENSORLG00000004427	si:ch211-117n7.8	60	74.961	Oryzias_latipes
ENSGACG00000010794	si:ch211-117n7.8	100	78.694	ENSORLG00020012792	si:ch211-117n7.8	61	78.538	Oryzias_latipes_hni
ENSGACG00000010794	si:ch211-117n7.8	100	79.160	ENSORLG00015018598	si:ch211-117n7.8	61	79.160	Oryzias_latipes_hsok
ENSGACG00000010794	si:ch211-117n7.8	100	77.934	ENSOMEG00000012229	si:ch211-117n7.8	61	77.934	Oryzias_melastigma
ENSGACG00000010794	si:ch211-117n7.8	100	58.880	ENSOGAG00000001076	SRBD1	62	58.560	Otolemur_garnettii
ENSGACG00000010794	si:ch211-117n7.8	100	56.515	ENSOARG00000005958	SRBD1	64	56.364	Ovis_aries
ENSGACG00000010794	si:ch211-117n7.8	100	60.480	ENSPPAG00000038442	SRBD1	62	60.320	Pan_paniscus
ENSGACG00000010794	si:ch211-117n7.8	100	61.120	ENSPPRG00000003449	SRBD1	62	60.960	Panthera_pardus
ENSGACG00000010794	si:ch211-117n7.8	100	61.120	ENSPTIG00000012495	SRBD1	62	60.960	Panthera_tigris_altaica
ENSGACG00000010794	si:ch211-117n7.8	100	60.480	ENSPTRG00000011889	SRBD1	62	60.320	Pan_troglodytes
ENSGACG00000010794	si:ch211-117n7.8	100	60.800	ENSPANG00000008063	SRBD1	62	60.640	Papio_anubis
ENSGACG00000010794	si:ch211-117n7.8	100	68.900	ENSPKIG00000021973	si:ch211-117n7.8	63	68.581	Paramormyrops_kingsleyae
ENSGACG00000010794	si:ch211-117n7.8	100	60.348	ENSPSIG00000008992	SRBD1	63	59.748	Pelodiscus_sinensis
ENSGACG00000010794	si:ch211-117n7.8	100	78.471	ENSPMGG00000013348	si:ch211-117n7.8	65	78.471	Periophthalmus_magnuspinnatus
ENSGACG00000010794	si:ch211-117n7.8	100	58.050	ENSPEMG00000020684	Srbd1	63	58.050	Peromyscus_maniculatus_bairdii
ENSGACG00000010794	si:ch211-117n7.8	100	82.399	ENSPFOG00000010650	si:ch211-117n7.8	62	82.399	Poecilia_formosa
ENSGACG00000010794	si:ch211-117n7.8	100	82.555	ENSPLAG00000002141	si:ch211-117n7.8	62	82.555	Poecilia_latipinna
ENSGACG00000010794	si:ch211-117n7.8	100	82.243	ENSPMEG00000018537	si:ch211-117n7.8	62	82.243	Poecilia_mexicana
ENSGACG00000010794	si:ch211-117n7.8	100	80.841	ENSPREG00000003258	si:ch211-117n7.8	64	80.841	Poecilia_reticulata
ENSGACG00000010794	si:ch211-117n7.8	100	53.519	ENSPPYG00000012444	SRBD1	64	53.226	Pongo_abelii
ENSGACG00000010794	si:ch211-117n7.8	94	55.897	ENSPCAG00000005629	SRBD1	61	55.556	Procavia_capensis
ENSGACG00000010794	si:ch211-117n7.8	85	58.757	ENSPCOG00000017669	SRBD1	55	58.757	Propithecus_coquereli
ENSGACG00000010794	si:ch211-117n7.8	100	56.916	ENSPVAG00000001782	SRBD1	62	56.688	Pteropus_vampyrus
ENSGACG00000010794	si:ch211-117n7.8	100	83.228	ENSPNYG00000000508	si:ch211-117n7.8	64	83.228	Pundamilia_nyererei
ENSGACG00000010794	si:ch211-117n7.8	100	72.943	ENSPNAG00000013492	SRBD1	63	72.627	Pygocentrus_nattereri
ENSGACG00000010794	si:ch211-117n7.8	100	59.425	ENSRNOG00000014720	Srbd1	62	59.425	Rattus_norvegicus
ENSGACG00000010794	si:ch211-117n7.8	100	60.320	ENSRBIG00000033486	SRBD1	62	60.160	Rhinopithecus_bieti
ENSGACG00000010794	si:ch211-117n7.8	100	60.320	ENSRROG00000041599	SRBD1	62	60.160	Rhinopithecus_roxellana
ENSGACG00000010794	si:ch211-117n7.8	100	60.960	ENSSBOG00000024982	SRBD1	62	60.800	Saimiri_boliviensis_boliviensis
ENSGACG00000010794	si:ch211-117n7.8	100	67.085	ENSSFOG00015001128	si:ch211-117n7.8	67	66.928	Scleropages_formosus
ENSGACG00000010794	si:ch211-117n7.8	100	82.171	ENSSMAG00000018256	si:ch211-117n7.8	61	82.171	Scophthalmus_maximus
ENSGACG00000010794	si:ch211-117n7.8	100	83.876	ENSSLDG00000023189	si:ch211-117n7.8	62	83.876	Seriola_lalandi_dorsalis
ENSGACG00000010794	si:ch211-117n7.8	100	58.506	ENSSARG00000009740	SRBD1	63	58.692	Sorex_araneus
ENSGACG00000010794	si:ch211-117n7.8	100	61.981	ENSSPUG00000010475	SRBD1	69	60.925	Sphenodon_punctatus
ENSGACG00000010794	si:ch211-117n7.8	100	76.971	ENSSPAG00000008092	-	62	78.671	Stegastes_partitus
ENSGACG00000010794	si:ch211-117n7.8	100	61.342	ENSSSCG00000008445	SRBD1	61	60.979	Sus_scrofa
ENSGACG00000010794	si:ch211-117n7.8	100	60.697	ENSTGUG00000003878	SRBD1	75	60.252	Taeniopygia_guttata
ENSGACG00000010794	si:ch211-117n7.8	100	78.037	ENSTRUG00000007080	si:ch211-117n7.8	69	78.037	Takifugu_rubripes
ENSGACG00000010794	si:ch211-117n7.8	100	79.875	ENSTNIG00000007464	si:ch211-117n7.8	62	79.875	Tetraodon_nigroviridis
ENSGACG00000010794	si:ch211-117n7.8	86	66.763	ENSTTRG00000011871	SRBD1	53	66.763	Tursiops_truncatus
ENSGACG00000010794	si:ch211-117n7.8	97	65.097	ENSUAMG00000008126	SRBD1	97	53.597	Ursus_americanus
ENSGACG00000010794	si:ch211-117n7.8	100	61.760	ENSUMAG00000012902	SRBD1	62	61.600	Ursus_maritimus
ENSGACG00000010794	si:ch211-117n7.8	100	60.480	ENSVPAG00000006825	SRBD1	69	60.320	Vicugna_pacos
ENSGACG00000010794	si:ch211-117n7.8	100	61.342	ENSVVUG00000005389	SRBD1	60	68.408	Vulpes_vulpes
ENSGACG00000010794	si:ch211-117n7.8	100	48.126	ENSXETG00000002760	srbd1	64	48.054	Xenopus_tropicalis
ENSGACG00000010794	si:ch211-117n7.8	100	81.153	ENSXMAG00000016861	si:ch211-117n7.8	62	81.153	Xiphophorus_maculatus