EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000010798 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: zgc:162879
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 7146 bases
Position: chrgroupXIX:12723645-12730790
Accession: ZDB-GENE-070424-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014298	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014323	-	2064	-	ENSGACP00000014298	687 (aa)	-	G3P9M4

Gene Model

Click here to download ENSGACG00000010798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000010798	zgc:162879	99	37.236	ENSGACG00000007528	rasef	99	37.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010798	zgc:162879	98	77.035	ENSAPOG00000008539	zgc:162879	99	77.326	Acanthochromis_polyacanthus
ENSGACG00000010798	zgc:162879	99	75.325	ENSACIG00000023717	zgc:162879	100	75.613	Amphilophus_citrinellus
ENSGACG00000010798	zgc:162879	88	71.824	ENSAOCG00000006210	zgc:162879	91	72.150	Amphiprion_ocellaris
ENSGACG00000010798	zgc:162879	98	76.599	ENSAPEG00000017489	zgc:162879	99	76.890	Amphiprion_percula
ENSGACG00000010798	zgc:162879	99	78.932	ENSATEG00000006102	zgc:162879	100	79.365	Anabas_testudineus
ENSGACG00000010798	zgc:162879	99	74.170	ENSACLG00000021066	zgc:162879	100	73.844	Astatotilapia_calliptera
ENSGACG00000010798	zgc:162879	99	58.730	ENSAMXG00000007430	zgc:162879	100	58.730	Astyanax_mexicanus
ENSGACG00000010798	zgc:162879	84	64.039	ENSCSEG00000013699	zgc:162879	91	64.532	Cynoglossus_semilaevis
ENSGACG00000010798	zgc:162879	99	68.505	ENSCVAG00000014510	zgc:162879	99	68.795	Cyprinodon_variegatus
ENSGACG00000010798	zgc:162879	99	57.493	ENSDARG00000074163	zgc:162879	100	57.493	Danio_rerio
ENSGACG00000010798	zgc:162879	90	61.295	ENSELUG00000019483	zgc:162879	97	61.295	Esox_lucius
ENSGACG00000010798	zgc:162879	77	64.673	ENSFHEG00000022549	zgc:162879	100	65.047	Fundulus_heteroclitus
ENSGACG00000010798	zgc:162879	99	67.391	ENSGAFG00000001313	zgc:162879	100	67.391	Gambusia_affinis
ENSGACG00000010798	zgc:162879	99	74.315	ENSHBUG00000016335	zgc:162879	100	74.747	Haplochromis_burtoni
ENSGACG00000010798	zgc:162879	99	46.983	ENSHCOG00000012026	zgc:162879	99	55.678	Hippocampus_comes
ENSGACG00000010798	zgc:162879	99	64.971	ENSKMAG00000016246	zgc:162879	100	65.262	Kryptolebias_marmoratus
ENSGACG00000010798	zgc:162879	99	72.150	ENSLBEG00000006690	zgc:162879	100	72.150	Labrus_bergylta
ENSGACG00000010798	zgc:162879	98	42.500	ENSLACG00000014082	-	98	42.513	Latimeria_chalumnae
ENSGACG00000010798	zgc:162879	98	56.914	ENSLOCG00000014347	zgc:162879	98	56.914	Lepisosteus_oculatus
ENSGACG00000010798	zgc:162879	99	72.872	ENSMAMG00000008875	zgc:162879	100	73.016	Mastacembelus_armatus
ENSGACG00000010798	zgc:162879	99	74.026	ENSMZEG00005022256	zgc:162879	100	74.459	Maylandia_zebra
ENSGACG00000010798	zgc:162879	99	66.378	ENSNBRG00000020110	zgc:162879	100	66.667	Neolamprologus_brichardi
ENSGACG00000010798	zgc:162879	98	73.699	ENSONIG00000015165	zgc:162879	100	73.699	Oreochromis_niloticus
ENSGACG00000010798	zgc:162879	99	62.409	ENSORLG00015017960	zgc:162879	99	62.409	Oryzias_latipes_hsok
ENSGACG00000010798	zgc:162879	99	51.312	ENSPKIG00000020661	zgc:162879	100	52.770	Paramormyrops_kingsleyae
ENSGACG00000010798	zgc:162879	98	66.910	ENSPFOG00000006354	zgc:162879	98	66.910	Poecilia_formosa
ENSGACG00000010798	zgc:162879	98	67.103	ENSPLAG00000020643	zgc:162879	98	66.910	Poecilia_latipinna
ENSGACG00000010798	zgc:162879	98	66.327	ENSPMEG00000014713	zgc:162879	99	66.327	Poecilia_mexicana
ENSGACG00000010798	zgc:162879	99	67.583	ENSPNYG00000010530	zgc:162879	100	68.017	Pundamilia_nyererei
ENSGACG00000010798	zgc:162879	99	58.646	ENSPNAG00000012022	zgc:162879	100	58.646	Pygocentrus_nattereri
ENSGACG00000010798	zgc:162879	84	48.093	ENSSFOG00015023774	zgc:162879	92	48.093	Scleropages_formosus
ENSGACG00000010798	zgc:162879	99	74.165	ENSSMAG00000001513	zgc:162879	99	74.601	Scophthalmus_maximus
ENSGACG00000010798	zgc:162879	99	79.221	ENSSDUG00000011478	zgc:162879	100	79.221	Seriola_dumerili
ENSGACG00000010798	zgc:162879	99	79.365	ENSSLDG00000000877	zgc:162879	100	79.365	Seriola_lalandi_dorsalis
ENSGACG00000010798	zgc:162879	98	69.913	ENSSPAG00000010598	zgc:162879	99	70.349	Stegastes_partitus
ENSGACG00000010798	zgc:162879	99	68.000	ENSTNIG00000019239	zgc:162879	99	68.276	Tetraodon_nigroviridis
ENSGACG00000010798	zgc:162879	98	41.248	ENSXETG00000015491	rasef	98	41.248	Xenopus_tropicalis
ENSGACG00000010798	zgc:162879	77	61.152	ENSXCOG00000020244	zgc:162879	100	61.152	Xiphophorus_couchianus
ENSGACG00000010798	zgc:162879	99	67.977	ENSXMAG00000002846	zgc:162879	99	69.536	Xiphophorus_maculatus