EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000010843 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7980 bases
Position: chrgroupI:11619039-11627018
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014347	AARP2CN	PF08142.12	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014372	-	2583	-	ENSGACP00000014347	821 (aa)	-	G3P9S3

Gene Model

Click here to download ENSGACG00000010843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010843	tsr1	99	54.779	ENSG00000167721	TSR1	99	53.922	Homo_sapiens
ENSGACG00000010843	tsr1	100	83.749	ENSAPOG00000020891	tsr1	100	83.155	Acanthochromis_polyacanthus
ENSGACG00000010843	tsr1	99	52.606	ENSAMEG00000007599	TSR1	99	52.848	Ailuropoda_melanoleuca
ENSGACG00000010843	tsr1	100	82.339	ENSACIG00000007090	tsr1	100	82.339	Amphilophus_citrinellus
ENSGACG00000010843	tsr1	100	83.552	ENSAOCG00000023284	tsr1	100	83.552	Amphiprion_ocellaris
ENSGACG00000010843	tsr1	93	83.248	ENSAPEG00000008452	tsr1	100	83.248	Amphiprion_percula
ENSGACG00000010843	tsr1	100	82.681	ENSATEG00000021961	tsr1	100	83.155	Anabas_testudineus
ENSGACG00000010843	tsr1	90	57.682	ENSAPLG00000013422	TSR1	98	57.547	Anas_platyrhynchos
ENSGACG00000010843	tsr1	71	48.142	ENSACAG00000000859	TSR1	92	47.547	Anolis_carolinensis
ENSGACG00000010843	tsr1	99	54.847	ENSANAG00000031071	TSR1	99	54.356	Aotus_nancymaae
ENSGACG00000010843	tsr1	100	81.317	ENSACLG00000007595	tsr1	99	81.796	Astatotilapia_calliptera
ENSGACG00000010843	tsr1	52	72.406	ENSAMXG00000008470	tsr1	90	72.028	Astyanax_mexicanus
ENSGACG00000010843	tsr1	99	55.447	ENSBTAG00000004225	TSR1	99	54.835	Bos_taurus
ENSGACG00000010843	tsr1	67	31.020	WBGene00022021	Y61A9LA.10	51	30.833	Caenorhabditis_elegans
ENSGACG00000010843	tsr1	96	39.255	WBGene00006497	tag-151	96	39.130	Caenorhabditis_elegans
ENSGACG00000010843	tsr1	99	53.988	ENSCJAG00000012456	TSR1	99	53.497	Callithrix_jacchus
ENSGACG00000010843	tsr1	99	54.156	ENSCAFG00000002106	-	99	53.252	Canis_familiaris
ENSGACG00000010843	tsr1	89	52.027	ENSCAFG00000019273	-	100	54.955	Canis_familiaris
ENSGACG00000010843	tsr1	99	54.279	ENSCAFG00020009728	TSR1	99	53.374	Canis_lupus_dingo
ENSGACG00000010843	tsr1	99	55.147	ENSCHIG00000023935	TSR1	99	54.890	Capra_hircus
ENSGACG00000010843	tsr1	99	55.828	ENSTSYG00000005468	TSR1	99	55.337	Carlito_syrichta
ENSGACG00000010843	tsr1	92	55.132	ENSCPOG00000014833	TSR1	99	54.474	Cavia_porcellus
ENSGACG00000010843	tsr1	92	53.897	ENSCCAG00000028962	TSR1	98	53.369	Cebus_capucinus
ENSGACG00000010843	tsr1	98	55.638	ENSCATG00000044262	TSR1	98	54.963	Cercocebus_atys
ENSGACG00000010843	tsr1	99	55.270	ENSCLAG00000005567	TSR1	99	54.779	Chinchilla_lanigera
ENSGACG00000010843	tsr1	98	55.638	ENSCSAG00000013788	TSR1	98	54.963	Chlorocebus_sabaeus
ENSGACG00000010843	tsr1	98	55.364	ENSCPBG00000020363	TSR1	97	55.746	Chrysemys_picta_bellii
ENSGACG00000010843	tsr1	96	45.105	ENSCING00000020658	-	99	44.472	Ciona_intestinalis
ENSGACG00000010843	tsr1	96	43.781	ENSCSAVG00000001875	-	100	43.750	Ciona_savignyi
ENSGACG00000010843	tsr1	98	50.249	ENSCANG00000033056	TSR1	98	52.109	Colobus_angolensis_palliatus
ENSGACG00000010843	tsr1	99	53.497	ENSCGRG00001023942	Tsr1	99	53.006	Cricetulus_griseus_chok1gshd
ENSGACG00000010843	tsr1	99	51.415	ENSCGRG00000013015	Tsr1	99	51.225	Cricetulus_griseus_crigri
ENSGACG00000010843	tsr1	100	77.685	ENSCSEG00000013009	tsr1	100	77.685	Cynoglossus_semilaevis
ENSGACG00000010843	tsr1	100	79.570	ENSCVAG00000000506	tsr1	100	79.570	Cyprinodon_variegatus
ENSGACG00000010843	tsr1	99	72.749	ENSDARG00000007744	tsr1	99	73.469	Danio_rerio
ENSGACG00000010843	tsr1	99	55.583	ENSDNOG00000004715	TSR1	99	56.874	Dasypus_novemcinctus
ENSGACG00000010843	tsr1	99	54.479	ENSDORG00000016371	-	99	53.988	Dipodomys_ordii
ENSGACG00000010843	tsr1	96	48.481	ENSDORG00000023234	-	99	47.975	Dipodomys_ordii
ENSGACG00000010843	tsr1	96	41.646	FBgn0037073	Tsr1	96	42.454	Drosophila_melanogaster
ENSGACG00000010843	tsr1	88	67.213	ENSETEG00000017534	TSR1	89	65.902	Echinops_telfairi
ENSGACG00000010843	tsr1	94	51.407	ENSEBUG00000013731	TSR1	97	50.128	Eptatretus_burgeri
ENSGACG00000010843	tsr1	99	55.270	ENSEASG00005009302	TSR1	97	55.025	Equus_asinus_asinus
ENSGACG00000010843	tsr1	99	55.270	ENSECAG00000009114	TSR1	99	55.025	Equus_caballus
ENSGACG00000010843	tsr1	100	73.008	ENSELUG00000020984	tsr1	96	72.771	Esox_lucius
ENSGACG00000010843	tsr1	99	54.289	ENSFCAG00000006313	TSR1	99	53.799	Felis_catus
ENSGACG00000010843	tsr1	99	57.299	ENSFALG00000006532	TSR1	99	56.970	Ficedula_albicollis
ENSGACG00000010843	tsr1	99	55.244	ENSFDAG00000006038	TSR1	99	54.590	Fukomys_damarensis
ENSGACG00000010843	tsr1	100	79.597	ENSFHEG00000003626	tsr1	99	79.478	Fundulus_heteroclitus
ENSGACG00000010843	tsr1	100	74.909	ENSGMOG00000010336	tsr1	100	74.909	Gadus_morhua
ENSGACG00000010843	tsr1	100	79.286	ENSGAFG00000012993	tsr1	99	80.119	Gambusia_affinis
ENSGACG00000010843	tsr1	98	56.173	ENSGAGG00000025619	-	99	56.005	Gopherus_agassizii
ENSGACG00000010843	tsr1	99	55.025	ENSGGOG00000001704	TSR1	99	54.044	Gorilla_gorilla
ENSGACG00000010843	tsr1	100	81.384	ENSHBUG00000017904	tsr1	100	81.178	Haplochromis_burtoni
ENSGACG00000010843	tsr1	96	48.035	ENSHGLG00000015688	-	98	47.529	Heterocephalus_glaber_female
ENSGACG00000010843	tsr1	99	55.311	ENSHGLG00000012806	-	99	54.701	Heterocephalus_glaber_female
ENSGACG00000010843	tsr1	99	55.311	ENSHGLG00100015392	TSR1	99	54.701	Heterocephalus_glaber_male
ENSGACG00000010843	tsr1	100	79.050	ENSHCOG00000001432	tsr1	100	78.441	Hippocampus_comes
ENSGACG00000010843	tsr1	100	70.764	ENSIPUG00000004618	tsr1	100	71.667	Ictalurus_punctatus
ENSGACG00000010843	tsr1	99	55.420	ENSSTOG00000011819	TSR1	99	55.501	Ictidomys_tridecemlineatus
ENSGACG00000010843	tsr1	90	52.863	ENSJJAG00000019505	Tsr1	95	52.330	Jaculus_jaculus
ENSGACG00000010843	tsr1	100	79.187	ENSKMAG00000005763	tsr1	99	79.545	Kryptolebias_marmoratus
ENSGACG00000010843	tsr1	100	85.137	ENSLBEG00000021823	tsr1	99	85.137	Labrus_bergylta
ENSGACG00000010843	tsr1	100	56.870	ENSLACG00000002197	TSR1	100	56.989	Latimeria_chalumnae
ENSGACG00000010843	tsr1	100	55.436	ENSLOCG00000006491	TSR1	99	55.795	Lepisosteus_oculatus
ENSGACG00000010843	tsr1	98	55.762	ENSMFAG00000021330	TSR1	98	55.087	Macaca_fascicularis
ENSGACG00000010843	tsr1	99	55.134	ENSMMUG00000017519	TSR1	98	54.963	Macaca_mulatta
ENSGACG00000010843	tsr1	98	55.762	ENSMNEG00000031382	TSR1	98	55.087	Macaca_nemestrina
ENSGACG00000010843	tsr1	98	55.514	ENSMLEG00000036733	TSR1	98	54.839	Mandrillus_leucophaeus
ENSGACG00000010843	tsr1	100	81.775	ENSMAMG00000017918	tsr1	99	81.538	Mastacembelus_armatus
ENSGACG00000010843	tsr1	100	82.416	ENSMZEG00005007477	tsr1	100	82.297	Maylandia_zebra
ENSGACG00000010843	tsr1	99	56.675	ENSMGAG00000005576	TSR1	99	55.839	Meleagris_gallopavo
ENSGACG00000010843	tsr1	99	56.020	ENSMICG00000012943	TSR1	99	55.760	Microcebus_murinus
ENSGACG00000010843	tsr1	99	54.212	ENSMOCG00000022764	Tsr1	99	53.968	Microtus_ochrogaster
ENSGACG00000010843	tsr1	100	83.755	ENSMMOG00000014280	tsr1	100	83.273	Mola_mola
ENSGACG00000010843	tsr1	98	56.683	ENSMODG00000010658	TSR1	99	56.436	Monodelphis_domestica
ENSGACG00000010843	tsr1	100	81.429	ENSMALG00000011681	tsr1	100	82.738	Monopterus_albus
ENSGACG00000010843	tsr1	99	53.968	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.129	Mus_caroli
ENSGACG00000010843	tsr1	99	54.579	ENSMUSG00000038335	Tsr1	99	53.742	Mus_musculus
ENSGACG00000010843	tsr1	99	54.823	MGP_PahariEiJ_G0017864	Tsr1	99	53.988	Mus_pahari
ENSGACG00000010843	tsr1	99	54.701	MGP_SPRETEiJ_G0017570	Tsr1	99	53.865	Mus_spretus
ENSGACG00000010843	tsr1	81	57.100	ENSMPUG00000013000	TSR1	100	56.156	Mustela_putorius_furo
ENSGACG00000010843	tsr1	98	56.319	ENSMLUG00000003505	TSR1	99	55.706	Myotis_lucifugus
ENSGACG00000010843	tsr1	100	81.049	ENSNBRG00000020728	tsr1	99	81.764	Neolamprologus_brichardi
ENSGACG00000010843	tsr1	99	52.399	ENSNLEG00000017184	TSR1	99	51.538	Nomascus_leucogenys
ENSGACG00000010843	tsr1	99	52.761	ENSMEUG00000015828	TSR1	99	52.270	Notamacropus_eugenii
ENSGACG00000010843	tsr1	100	81.829	ENSONIG00000013131	tsr1	100	82.310	Oreochromis_niloticus
ENSGACG00000010843	tsr1	95	54.224	ENSOANG00000008637	TSR1	100	54.224	Ornithorhynchus_anatinus
ENSGACG00000010843	tsr1	99	55.746	ENSOCUG00000014256	TSR1	99	55.392	Oryctolagus_cuniculus
ENSGACG00000010843	tsr1	100	79.048	ENSORLG00000004926	tsr1	99	78.401	Oryzias_latipes
ENSGACG00000010843	tsr1	100	79.167	ENSORLG00020008792	tsr1	99	78.495	Oryzias_latipes_hni
ENSGACG00000010843	tsr1	100	79.167	ENSORLG00015013838	tsr1	99	78.520	Oryzias_latipes_hsok
ENSGACG00000010843	tsr1	100	80.191	ENSOMEG00000004830	tsr1	99	80.191	Oryzias_melastigma
ENSGACG00000010843	tsr1	99	55.811	ENSOGAG00000004492	TSR1	99	54.800	Otolemur_garnettii
ENSGACG00000010843	tsr1	99	55.746	ENSOARG00000015437	TSR1	97	55.134	Ovis_aries
ENSGACG00000010843	tsr1	99	54.779	ENSPPAG00000036355	TSR1	99	53.922	Pan_paniscus
ENSGACG00000010843	tsr1	99	54.167	ENSPPRG00000015519	-	99	53.742	Panthera_pardus
ENSGACG00000010843	tsr1	99	54.233	ENSPTIG00000010608	TSR1	99	53.742	Panthera_tigris_altaica
ENSGACG00000010843	tsr1	99	54.779	ENSPTRG00000008547	TSR1	99	53.922	Pan_troglodytes
ENSGACG00000010843	tsr1	98	53.036	ENSPANG00000024463	TSR1	98	52.919	Papio_anubis
ENSGACG00000010843	tsr1	100	71.620	ENSPKIG00000013972	tsr1	100	70.681	Paramormyrops_kingsleyae
ENSGACG00000010843	tsr1	87	54.808	ENSPSIG00000018258	TSR1	99	55.663	Pelodiscus_sinensis
ENSGACG00000010843	tsr1	99	80.508	ENSPMGG00000011577	tsr1	99	80.508	Periophthalmus_magnuspinnatus
ENSGACG00000010843	tsr1	99	53.098	ENSPEMG00000018033	Tsr1	99	52.270	Peromyscus_maniculatus_bairdii
ENSGACG00000010843	tsr1	99	56.495	ENSPCIG00000009357	TSR1	97	55.990	Phascolarctos_cinereus
ENSGACG00000010843	tsr1	100	80.288	ENSPFOG00000004483	TSR1	100	80.649	Poecilia_formosa
ENSGACG00000010843	tsr1	100	79.572	ENSPLAG00000022320	tsr1	100	79.197	Poecilia_latipinna
ENSGACG00000010843	tsr1	100	79.810	ENSPMEG00000004577	tsr1	99	80.166	Poecilia_mexicana
ENSGACG00000010843	tsr1	97	80.562	ENSPREG00000010354	tsr1	98	78.710	Poecilia_reticulata
ENSGACG00000010843	tsr1	99	50.663	ENSPPYG00000007792	TSR1	99	50.242	Pongo_abelii
ENSGACG00000010843	tsr1	53	67.442	ENSPCAG00000012973	-	70	67.568	Procavia_capensis
ENSGACG00000010843	tsr1	99	55.720	ENSPCOG00000017928	TSR1	99	55.228	Propithecus_coquereli
ENSGACG00000010843	tsr1	99	54.969	ENSPVAG00000002162	TSR1	99	54.479	Pteropus_vampyrus
ENSGACG00000010843	tsr1	100	81.557	ENSPNYG00000016163	tsr1	99	82.036	Pundamilia_nyererei
ENSGACG00000010843	tsr1	99	72.976	ENSPNAG00000008659	tsr1	99	73.008	Pygocentrus_nattereri
ENSGACG00000010843	tsr1	99	53.140	ENSRNOG00000002980	Tsr1	99	53.431	Rattus_norvegicus
ENSGACG00000010843	tsr1	99	55.257	ENSRBIG00000040016	TSR1	99	54.712	Rhinopithecus_bieti
ENSGACG00000010843	tsr1	99	55.134	ENSRROG00000030361	TSR1	99	54.590	Rhinopithecus_roxellana
ENSGACG00000010843	tsr1	96	30.461	YDL060W	-	98	30.110	Saccharomyces_cerevisiae
ENSGACG00000010843	tsr1	99	54.724	ENSSBOG00000020785	TSR1	99	54.233	Saimiri_boliviensis_boliviensis
ENSGACG00000010843	tsr1	99	56.196	ENSSHAG00000011394	TSR1	99	56.687	Sarcophilus_harrisii
ENSGACG00000010843	tsr1	100	72.804	ENSSFOG00015005455	tsr1	100	72.727	Scleropages_formosus
ENSGACG00000010843	tsr1	100	83.948	ENSSMAG00000009504	tsr1	100	83.948	Scophthalmus_maximus
ENSGACG00000010843	tsr1	100	84.223	ENSSDUG00000012074	tsr1	99	83.986	Seriola_dumerili
ENSGACG00000010843	tsr1	100	84.423	ENSSLDG00000002031	tsr1	99	84.542	Seriola_lalandi_dorsalis
ENSGACG00000010843	tsr1	92	56.574	ENSSARG00000000759	TSR1	93	56.574	Sorex_araneus
ENSGACG00000010843	tsr1	99	56.189	ENSSPUG00000007042	TSR1	99	56.068	Sphenodon_punctatus
ENSGACG00000010843	tsr1	100	85.018	ENSSPAG00000021951	tsr1	100	85.018	Stegastes_partitus
ENSGACG00000010843	tsr1	99	55.746	ENSSSCG00000038534	TSR1	99	55.257	Sus_scrofa
ENSGACG00000010843	tsr1	90	58.737	ENSTGUG00000005883	TSR1	100	57.775	Taeniopygia_guttata
ENSGACG00000010843	tsr1	100	79.521	ENSTRUG00000004665	tsr1	100	79.207	Takifugu_rubripes
ENSGACG00000010843	tsr1	99	81.081	ENSTNIG00000016196	tsr1	100	81.081	Tetraodon_nigroviridis
ENSGACG00000010843	tsr1	66	70.000	ENSTBEG00000015275	-	66	70.000	Tupaia_belangeri
ENSGACG00000010843	tsr1	99	55.353	ENSTTRG00000001177	TSR1	99	54.745	Tursiops_truncatus
ENSGACG00000010843	tsr1	99	52.638	ENSUAMG00000025160	TSR1	99	53.006	Ursus_americanus
ENSGACG00000010843	tsr1	95	53.240	ENSUMAG00000009294	TSR1	98	53.494	Ursus_maritimus
ENSGACG00000010843	tsr1	83	50.218	ENSVPAG00000000228	TSR1	99	49.491	Vicugna_pacos
ENSGACG00000010843	tsr1	99	53.912	ENSVVUG00000021767	TSR1	99	53.006	Vulpes_vulpes
ENSGACG00000010843	tsr1	100	52.096	ENSXETG00000023797	tsr1	100	52.300	Xenopus_tropicalis
ENSGACG00000010843	tsr1	100	79.782	ENSXCOG00000009635	tsr1	100	79.540	Xiphophorus_couchianus
ENSGACG00000010843	tsr1	100	79.738	ENSXMAG00000001397	tsr1	97	79.738	Xiphophorus_maculatus