EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000010856 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
20852 bases
Position
chrgroupI:11905446-11926297
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000014381tRNA_anti-codonPF01336.258.3e-1111
ENSGACP00000014376tRNA_anti-codonPF01336.258.8e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000014402-2488-ENSGACP00000014376602 (aa)-G3P9V2
ENSGACT00000014407-1865-ENSGACP00000014381591 (aa)-G3P9V7
Gene Model
Click here to download ENSGACG00000010856's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010856's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000010856rpa19962.273ENSGACG00000020524RPA19962.273
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000010856rpa110083.416ENSAPOG00000011658rpa110083.416Acanthochromis_polyacanthus
ENSGACG00000010856rpa19270.139ENSAPOG00000019409RPA17970.139Acanthochromis_polyacanthus
ENSGACG00000010856rpa19960.720ENSAMEG00000007706RPA19960.720Ailuropoda_melanoleuca
ENSGACG00000010856rpa19561.158ENSACIG00000012881RPA19961.158Amphilophus_citrinellus
ENSGACG00000010856rpa19673.875ENSACIG00000007277rpa19973.875Amphilophus_citrinellus
ENSGACG00000010856rpa110082.919ENSAOCG00000023376rpa110082.919Amphiprion_ocellaris
ENSGACG00000010856rpa19957.519ENSAOCG00000009003RPA19957.519Amphiprion_ocellaris
ENSGACG00000010856rpa19270.670ENSAPEG00000019132RPA19955.758Amphiprion_percula
ENSGACG00000010856rpa110083.250ENSAPEG00000008634rpa110083.250Amphiprion_percula
ENSGACG00000010856rpa19583.421ENSATEG00000022024rpa110083.421Anabas_testudineus
ENSGACG00000010856rpa19958.423ENSATEG00000006443RPA19958.423Anabas_testudineus
ENSGACG00000010856rpa19853.185ENSAPLG00000012442RPA110053.185Anas_platyrhynchos
ENSGACG00000010856rpa19956.427ENSACAG00000014490RPA19956.928Anolis_carolinensis
ENSGACG00000010856rpa19860.697ENSANAG00000023456RPA19960.697Aotus_nancymaae
ENSGACG00000010856rpa19483.511ENSACLG00000006640rpa19983.511Astatotilapia_calliptera
ENSGACG00000010856rpa19959.875ENSACLG00000005223RPA19959.875Astatotilapia_calliptera
ENSGACG00000010856rpa19975.333ENSAMXG00000008418rpa110074.692Astyanax_mexicanus
ENSGACG00000010856rpa19960.454ENSBTAG00000009711RPA19960.454Bos_taurus
ENSGACG00000010856rpa19959.446ENSCJAG00000001848RPA19960.163Callithrix_jacchus
ENSGACG00000010856rpa19961.066ENSCAFG00000019249RPA19961.551Canis_familiaris
ENSGACG00000010856rpa19961.066ENSCAFG00020009847RPA19961.551Canis_lupus_dingo
ENSGACG00000010856rpa19960.813ENSCHIG00000026308RPA19960.940Capra_hircus
ENSGACG00000010856rpa19960.454ENSTSYG00000003482-9960.454Carlito_syrichta
ENSGACG00000010856rpa19960.749ENSCPOG00000000035RPA19960.749Cavia_porcellus
ENSGACG00000010856rpa19950.000ENSCCAG00000010981RPA19950.732Cebus_capucinus
ENSGACG00000010856rpa19956.301ENSCLAG00000015045-9956.301Chinchilla_lanigera
ENSGACG00000010856rpa19959.869ENSCLAG00000005185-9959.869Chinchilla_lanigera
ENSGACG00000010856rpa19951.057ENSCSAG00000013833RPA19951.057Chlorocebus_sabaeus
ENSGACG00000010856rpa19560.818ENSCHOG00000013540-9960.818Choloepus_hoffmanni
ENSGACG00000010856rpa17368.822ENSCHOG00000009454-9968.822Choloepus_hoffmanni
ENSGACG00000010856rpa19961.990ENSCPBG00000020377RPA19962.522Chrysemys_picta_bellii
ENSGACG00000010856rpa19943.449ENSCING00000023482-9943.449Ciona_intestinalis
ENSGACG00000010856rpa19860.862ENSCANG00000030911RPA19960.862Colobus_angolensis_palliatus
ENSGACG00000010856rpa19960.227ENSCGRG00001008197Rpa19960.227Cricetulus_griseus_chok1gshd
ENSGACG00000010856rpa17964.583ENSCGRG00000000582Rpa19962.648Cricetulus_griseus_crigri
ENSGACG00000010856rpa19954.735ENSCSEG00000012726RPA19955.670Cynoglossus_semilaevis
ENSGACG00000010856rpa110078.125ENSCSEG00000013066rpa110078.125Cynoglossus_semilaevis
ENSGACG00000010856rpa110080.131ENSCVAG00000019431rpa110080.624Cyprinodon_variegatus
ENSGACG00000010856rpa19070.270ENSCVAG00000013446-9654.899Cyprinodon_variegatus
ENSGACG00000010856rpa19974.210ENSDARG00000003938rpa19974.210Danio_rerio
ENSGACG00000010856rpa19962.562ENSDNOG00000017218RPA19962.562Dasypus_novemcinctus
ENSGACG00000010856rpa19961.526ENSDORG00000006199Rpa19961.526Dipodomys_ordii
ENSGACG00000010856rpa19941.137FBgn0010173RpA-709941.639Drosophila_melanogaster
ENSGACG00000010856rpa18272.165ENSETEG00000017608RPA18272.165Echinops_telfairi
ENSGACG00000010856rpa19861.000ENSEASG00005009372RPA19961.649Equus_asinus_asinus
ENSGACG00000010856rpa19961.211ENSECAG00000023886RPA19961.211Equus_caballus
ENSGACG00000010856rpa17068.496ENSEEUG00000002186-6868.496Erinaceus_europaeus
ENSGACG00000010856rpa19978.939ENSELUG00000021071rpa19978.939Esox_lucius
ENSGACG00000010856rpa18861.626ENSELUG00000006136RPA19961.626Esox_lucius
ENSGACG00000010856rpa19960.650ENSFCAG00000006306RPA19960.650Felis_catus
ENSGACG00000010856rpa19961.338ENSFALG00000006575RPA19961.338Ficedula_albicollis
ENSGACG00000010856rpa19961.011ENSFDAG00000007720RPA19961.011Fukomys_damarensis
ENSGACG00000010856rpa110080.464ENSFHEG00000003580rpa110080.464Fundulus_heteroclitus
ENSGACG00000010856rpa19976.087ENSGMOG00000010382rpa19976.087Gadus_morhua
ENSGACG00000010856rpa19961.184ENSGALG00000003072RPA19961.184Gallus_gallus
ENSGACG00000010856rpa110080.100ENSGAFG00000012916rpa110080.100Gambusia_affinis
ENSGACG00000010856rpa19469.767ENSGAFG00000020953RPA19956.970Gambusia_affinis
ENSGACG00000010856rpa19961.601ENSGAGG00000013611RPA19961.601Gopherus_agassizii
ENSGACG00000010856rpa19961.083ENSGGOG00000014186RPA19961.083Gorilla_gorilla
ENSGACG00000010856rpa19984.385ENSHBUG00000017773rpa19984.385Haplochromis_burtoni
ENSGACG00000010856rpa19557.469ENSHBUG00000009348RPA19857.469Haplochromis_burtoni
ENSGACG00000010856rpa19960.848ENSHGLG00000008846RPA19960.848Heterocephalus_glaber_female
ENSGACG00000010856rpa19956.770ENSHGLG00100000799-9956.770Heterocephalus_glaber_male
ENSGACG00000010856rpa19952.614ENSHGLG00100002005-9952.614Heterocephalus_glaber_male
ENSGACG00000010856rpa19960.848ENSHGLG00100017755-9960.848Heterocephalus_glaber_male
ENSGACG00000010856rpa19945.008ENSHCOG00000000351RPA19844.949Hippocampus_comes
ENSGACG00000010856rpa110072.104ENSHCOG00000001401rpa110072.431Hippocampus_comes
ENSGACG00000010856rpa19975.702ENSIPUG00000004400rpa19975.702Ictalurus_punctatus
ENSGACG00000010856rpa19159.823ENSSTOG00000022475RPA19459.823Ictidomys_tridecemlineatus
ENSGACG00000010856rpa19662.034ENSJJAG00000000876Rpa19862.034Jaculus_jaculus
ENSGACG00000010856rpa110078.013ENSKMAG00000005605rpa110078.502Kryptolebias_marmoratus
ENSGACG00000010856rpa19959.901ENSKMAG00000000234RPA19959.901Kryptolebias_marmoratus
ENSGACG00000010856rpa19981.788ENSLBEG00000021604rpa19981.788Labrus_bergylta
ENSGACG00000010856rpa19469.213ENSLBEG00000002281RPA18068.636Labrus_bergylta
ENSGACG00000010856rpa18059.548ENSLACG00000007210RPA19958.811Latimeria_chalumnae
ENSGACG00000010856rpa19969.154ENSLOCG00000006397rpa19969.320Lepisosteus_oculatus
ENSGACG00000010856rpa19959.516ENSLAFG00000015354RPA19959.516Loxodonta_africana
ENSGACG00000010856rpa18258.614ENSMFAG00000036138-9958.614Macaca_fascicularis
ENSGACG00000010856rpa19961.020ENSMMUG00000011604-9961.028Macaca_mulatta
ENSGACG00000010856rpa19956.230ENSMMUG00000002442-9956.230Macaca_mulatta
ENSGACG00000010856rpa19959.609ENSMNEG00000031632-9959.609Macaca_nemestrina
ENSGACG00000010856rpa19954.377ENSMNEG00000029837-9763.100Macaca_nemestrina
ENSGACG00000010856rpa19857.521ENSMLEG00000038768-9958.017Mandrillus_leucophaeus
ENSGACG00000010856rpa19369.302ENSMAMG00000020097RPA19268.409Mastacembelus_armatus
ENSGACG00000010856rpa110085.075ENSMAMG00000017993rpa110085.075Mastacembelus_armatus
ENSGACG00000010856rpa19984.551ENSMZEG00005007551rpa19984.551Maylandia_zebra
ENSGACG00000010856rpa19959.875ENSMZEG00005024731RPA19959.875Maylandia_zebra
ENSGACG00000010856rpa19959.704ENSMGAG00000005315RPA19959.868Meleagris_gallopavo
ENSGACG00000010856rpa19860.833ENSMAUG00000010474Rpa19960.833Mesocricetus_auratus
ENSGACG00000010856rpa19961.438ENSMICG00000012867RPA19961.438Microcebus_murinus
ENSGACG00000010856rpa19960.884ENSMOCG00000013019Rpa19960.884Microtus_ochrogaster
ENSGACG00000010856rpa110080.431ENSMMOG00000014292rpa110082.676Mola_mola
ENSGACG00000010856rpa19861.735ENSMMOG00000010868RPA19861.735Mola_mola
ENSGACG00000010856rpa19961.626ENSMODG00000010549RPA19961.626Monodelphis_domestica
ENSGACG00000010856rpa110083.748ENSMALG00000011453rpa110083.748Monopterus_albus
ENSGACG00000010856rpa19968.934ENSMALG00000001208RPA18768.934Monopterus_albus
ENSGACG00000010856rpa19960.000MGP_CAROLIEiJ_G0016734Rpa19960.000Mus_caroli
ENSGACG00000010856rpa19959.677ENSMUSG00000000751Rpa19959.677Mus_musculus
ENSGACG00000010856rpa19960.292MGP_PahariEiJ_G0017871Rpa19960.130Mus_pahari
ENSGACG00000010856rpa19959.581MGP_SPRETEiJ_G0017577Rpa19959.581Mus_spretus
ENSGACG00000010856rpa19961.401ENSMPUG00000013119RPA19961.401Mustela_putorius_furo
ENSGACG00000010856rpa19959.935ENSMLUG00000006113RPA19959.935Myotis_lucifugus
ENSGACG00000010856rpa19762.144ENSNGAG00000004522Rpa19562.144Nannospalax_galili
ENSGACG00000010856rpa19583.012ENSNBRG00000020595rpa19983.012Neolamprologus_brichardi
ENSGACG00000010856rpa19859.296ENSNBRG00000009672RPA19759.296Neolamprologus_brichardi
ENSGACG00000010856rpa19960.586ENSNLEG00000017149RPA19961.075Nomascus_leucogenys
ENSGACG00000010856rpa19853.322ENSMEUG00000006714RPA19953.322Notamacropus_eugenii
ENSGACG00000010856rpa19660.201ENSODEG00000009038RPA19760.201Octodon_degus
ENSGACG00000010856rpa19982.871ENSONIG00000013135rpa19982.871Oreochromis_niloticus
ENSGACG00000010856rpa19862.314ENSOANG00000010880RPA110062.109Ornithorhynchus_anatinus
ENSGACG00000010856rpa19958.851ENSOCUG00000001504RPA19958.851Oryctolagus_cuniculus
ENSGACG00000010856rpa19956.508ENSORLG00000003368RPA19956.508Oryzias_latipes
ENSGACG00000010856rpa19981.531ENSORLG00000004856rpa19981.531Oryzias_latipes
ENSGACG00000010856rpa19981.697ENSORLG00020008980rpa19981.697Oryzias_latipes_hni
ENSGACG00000010856rpa19966.368ENSORLG00020015284RPA19366.368Oryzias_latipes_hni
ENSGACG00000010856rpa17065.133ENSORLG00015005867-9565.217Oryzias_latipes_hsok
ENSGACG00000010856rpa19981.697ENSORLG00015013982rpa19981.697Oryzias_latipes_hsok
ENSGACG00000010856rpa19956.474ENSORLG00015020383RPA19956.474Oryzias_latipes_hsok
ENSGACG00000010856rpa19557.958ENSOMEG00000011040RPA110057.958Oryzias_melastigma
ENSGACG00000010856rpa19978.333ENSOMEG00000004704rpa19978.333Oryzias_melastigma
ENSGACG00000010856rpa19960.586ENSOGAG00000005581-9960.586Otolemur_garnettii
ENSGACG00000010856rpa17674.033ENSOGAG00000029379-9874.033Otolemur_garnettii
ENSGACG00000010856rpa19960.813ENSOARG00000014479RPA19960.940Ovis_aries
ENSGACG00000010856rpa19960.912ENSPPAG00000039680RPA19961.401Pan_paniscus
ENSGACG00000010856rpa19960.749ENSPPRG00000011807RPA19960.749Panthera_pardus
ENSGACG00000010856rpa19960.650ENSPTIG00000007898RPA19960.650Panthera_tigris_altaica
ENSGACG00000010856rpa19960.912ENSPTRG00000008539RPA19961.401Pan_troglodytes
ENSGACG00000010856rpa19960.813ENSPANG00000024592RPA19960.813Papio_anubis
ENSGACG00000010856rpa19474.606ENSPKIG00000008053rpa19475.699Paramormyrops_kingsleyae
ENSGACG00000010856rpa19761.824ENSPSIG00000015617RPA19861.824Pelodiscus_sinensis
ENSGACG00000010856rpa19978.037ENSPMGG00000011589rpa19978.037Periophthalmus_magnuspinnatus
ENSGACG00000010856rpa19958.236ENSPMGG00000000543RPA19960.893Periophthalmus_magnuspinnatus
ENSGACG00000010856rpa19960.621ENSPEMG00000021061Rpa19960.621Peromyscus_maniculatus_bairdii
ENSGACG00000010856rpa19961.238ENSPCIG00000019049RPA19961.564Phascolarctos_cinereus
ENSGACG00000010856rpa110080.929ENSPFOG00000003987rpa110080.929Poecilia_formosa
ENSGACG00000010856rpa19456.656ENSPLAG00000008844-9756.656Poecilia_latipinna
ENSGACG00000010856rpa110081.260ENSPLAG00000004984rpa110081.260Poecilia_latipinna
ENSGACG00000010856rpa19456.058ENSPMEG00000003627-9656.452Poecilia_mexicana
ENSGACG00000010856rpa110081.095ENSPMEG00000020602rpa110081.095Poecilia_mexicana
ENSGACG00000010856rpa19471.395ENSPREG00000010119RPA19270.682Poecilia_reticulata
ENSGACG00000010856rpa19473.592ENSPREG00000010174rpa19673.592Poecilia_reticulata
ENSGACG00000010856rpa19961.928ENSPCOG00000001799RPA19961.928Propithecus_coquereli
ENSGACG00000010856rpa19959.935ENSPVAG00000002149RPA19959.935Pteropus_vampyrus
ENSGACG00000010856rpa19984.551ENSPNYG00000016316rpa19984.551Pundamilia_nyererei
ENSGACG00000010856rpa19959.528ENSPNYG00000024165RPA19959.528Pundamilia_nyererei
ENSGACG00000010856rpa19966.332ENSPNAG00000008599rpa19668.467Pygocentrus_nattereri
ENSGACG00000010856rpa19867.961ENSRNOG00000003123Rpa19960.884Rattus_norvegicus
ENSGACG00000010856rpa19960.488ENSRBIG00000036587RPA19960.488Rhinopithecus_bieti
ENSGACG00000010856rpa19955.772ENSRROG00000043278RPA19955.772Rhinopithecus_roxellana
ENSGACG00000010856rpa19732.353YAR007CRFA19732.353Saccharomyces_cerevisiae
ENSGACG00000010856rpa19161.250ENSSBOG00000030233RPA19762.032Saimiri_boliviensis_boliviensis
ENSGACG00000010856rpa19960.884ENSSHAG00000007969RPA19861.438Sarcophilus_harrisii
ENSGACG00000010856rpa19976.949ENSSFOG00015005362rpa19276.949Scleropages_formosus
ENSGACG00000010856rpa19271.132ENSSMAG00000019746RPA19957.078Scophthalmus_maximus
ENSGACG00000010856rpa110084.743ENSSDUG00000011949rpa110084.743Seriola_dumerili
ENSGACG00000010856rpa19768.113ENSSDUG00000016358RPA18171.689Seriola_dumerili
ENSGACG00000010856rpa110085.075ENSSLDG00000011806rpa110085.075Seriola_lalandi_dorsalis
ENSGACG00000010856rpa19767.679ENSSLDG00000020784RPA18467.679Seriola_lalandi_dorsalis
ENSGACG00000010856rpa18775.758ENSSARG00000007506RPA19948.007Sorex_araneus
ENSGACG00000010856rpa19760.544ENSSPUG00000007223RPA19860.544Sphenodon_punctatus
ENSGACG00000010856rpa19961.667ENSSPAG00000011165RPA19962.098Stegastes_partitus
ENSGACG00000010856rpa110084.577ENSSPAG00000009903rpa110084.577Stegastes_partitus
ENSGACG00000010856rpa19960.811ENSSSCG00000017822RPA19960.862Sus_scrofa
ENSGACG00000010856rpa19960.755ENSTGUG00000005775RPA19960.755Taeniopygia_guttata
ENSGACG00000010856rpa19969.159ENSTRUG00000000405RPA18668.793Takifugu_rubripes
ENSGACG00000010856rpa110080.431ENSTRUG00000003616rpa110080.431Takifugu_rubripes
ENSGACG00000010856rpa110079.772ENSTNIG00000016199rpa19980.033Tetraodon_nigroviridis
ENSGACG00000010856rpa17368.736ENSTBEG00000002709RPA17468.481Tupaia_belangeri
ENSGACG00000010856rpa19959.675ENSTTRG00000001169RPA19959.675Tursiops_truncatus
ENSGACG00000010856rpa18869.231ENSUAMG00000015676RPA19769.231Ursus_americanus
ENSGACG00000010856rpa19961.252ENSUMAG00000009328RPA19961.252Ursus_maritimus
ENSGACG00000010856rpa19959.375ENSVPAG00000009443RPA19959.375Vicugna_pacos
ENSGACG00000010856rpa19961.075ENSVVUG00000021715RPA19961.564Vulpes_vulpes
ENSGACG00000010856rpa19963.097ENSXETG00000013538rpa19964.959Xenopus_tropicalis
ENSGACG00000010856rpa19561.319ENSXCOG00000009899-9961.319Xiphophorus_couchianus
ENSGACG00000010856rpa19877.066ENSXCOG00000010068rpa19977.066Xiphophorus_couchianus
ENSGACG00000010856rpa110080.265ENSXMAG00000004102rpa110081.283Xiphophorus_maculatus
ENSGACG00000010856rpa19470.233ENSXMAG00000010333RPA18570.233Xiphophorus_maculatus

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