EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000010863 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7489 bases
Position: chrgroupXIX:12871147-12878635
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014383	HRDC	PF00570.23	1.3e-11	1	1
ENSGACP00000014383	BDHCT	PF08072.11	5.1e-16	1	1
ENSGACP00000014388	DEAD	PF00270.29	3.1e-17	1	1
ENSGACP00000014383	DEAD	PF00270.29	8.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014409	-	4502	-	ENSGACP00000014383	1360 (aa)	-	G3P9V9
ENSGACT00000014414	-	1554	-	ENSGACP00000014388	518 (aa)	-	G3P9W4

Gene Model

Click here to download ENSGACG00000010863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000010863	blm	94	40.202	ENSGACG00000001005	recql	86	38.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010863	blm	100	73.913	ENSG00000197299	BLM	65	73.975	Homo_sapiens
ENSGACG00000010863	blm	100	88.826	ENSAPOG00000017966	blm	99	70.559	Acanthochromis_polyacanthus
ENSGACG00000010863	blm	100	72.779	ENSAMEG00000013843	BLM	71	64.076	Ailuropoda_melanoleuca
ENSGACG00000010863	blm	100	89.773	ENSACIG00000023762	blm	99	70.443	Amphilophus_citrinellus
ENSGACG00000010863	blm	100	89.773	ENSAOCG00000003318	blm	99	70.617	Amphiprion_ocellaris
ENSGACG00000010863	blm	100	89.583	ENSAPEG00000018105	blm	99	71.809	Amphiprion_percula
ENSGACG00000010863	blm	100	90.909	ENSATEG00000006421	blm	100	73.007	Anabas_testudineus
ENSGACG00000010863	blm	100	71.509	ENSAPLG00000006878	BLM	91	52.518	Anas_platyrhynchos
ENSGACG00000010863	blm	99	72.328	ENSACAG00000014275	BLM	80	52.163	Anolis_carolinensis
ENSGACG00000010863	blm	100	73.535	ENSANAG00000038415	BLM	56	73.566	Aotus_nancymaae
ENSGACG00000010863	blm	100	88.636	ENSACLG00000020354	blm	99	70.572	Astatotilapia_calliptera
ENSGACG00000010863	blm	100	84.091	ENSAMXG00000016970	blm	85	70.370	Astyanax_mexicanus
ENSGACG00000010863	blm	81	80.791	ENSBTAG00000020301	BLM	65	66.189	Bos_taurus
ENSGACG00000010863	blm	99	44.991	WBGene00001865	him-6	75	37.806	Caenorhabditis_elegans
ENSGACG00000010863	blm	100	73.913	ENSCJAG00000009803	BLM	58	74.180	Callithrix_jacchus
ENSGACG00000010863	blm	100	72.779	ENSCAFG00000012385	BLM	60	64.286	Canis_familiaris
ENSGACG00000010863	blm	100	72.779	ENSCAFG00020016111	BLM	87	66.988	Canis_lupus_dingo
ENSGACG00000010863	blm	100	73.724	ENSCHIG00000010329	BLM	68	64.413	Capra_hircus
ENSGACG00000010863	blm	100	73.396	ENSCAPG00000017976	BLM	67	72.464	Cavia_aperea
ENSGACG00000010863	blm	100	73.396	ENSCPOG00000001761	BLM	56	64.403	Cavia_porcellus
ENSGACG00000010863	blm	100	73.535	ENSCCAG00000023069	BLM	56	73.566	Cebus_capucinus
ENSGACG00000010863	blm	100	73.346	ENSCATG00000040609	BLM	75	76.721	Cercocebus_atys
ENSGACG00000010863	blm	100	73.724	ENSCLAG00000012111	BLM	72	60.201	Chinchilla_lanigera
ENSGACG00000010863	blm	83	61.692	ENSCHOG00000006255	BLM	60	60.185	Choloepus_hoffmanni
ENSGACG00000010863	blm	100	71.429	ENSCPBG00000025000	BLM	97	51.446	Chrysemys_picta_bellii
ENSGACG00000010863	blm	88	41.126	ENSCING00000021036	-	82	41.126	Ciona_intestinalis
ENSGACG00000010863	blm	99	38.462	ENSCSAVG00000007521	-	88	37.970	Ciona_savignyi
ENSGACG00000010863	blm	100	60.232	ENSCANG00000034808	BLM	75	58.333	Colobus_angolensis_palliatus
ENSGACG00000010863	blm	100	73.574	ENSCGRG00001024897	Blm	80	52.476	Cricetulus_griseus_chok1gshd
ENSGACG00000010863	blm	100	86.742	ENSCSEG00000013483	blm	97	66.897	Cynoglossus_semilaevis
ENSGACG00000010863	blm	67	75.630	ENSCVAG00000017583	blm	99	63.396	Cyprinodon_variegatus
ENSGACG00000010863	blm	100	82.197	ENSDARG00000077089	blm	100	55.381	Danio_rerio
ENSGACG00000010863	blm	100	73.055	ENSDNOG00000010159	BLM	84	50.386	Dasypus_novemcinctus
ENSGACG00000010863	blm	100	73.194	ENSDORG00000011033	Blm	99	54.554	Dipodomys_ordii
ENSGACG00000010863	blm	67	56.667	ENSETEG00000015019	BLM	51	50.607	Echinops_telfairi
ENSGACG00000010863	blm	91	61.123	ENSEBUG00000015743	-	90	53.311	Eptatretus_burgeri
ENSGACG00000010863	blm	100	67.108	ENSEASG00005006727	BLM	69	60.664	Equus_asinus_asinus
ENSGACG00000010863	blm	100	73.157	ENSECAG00000011405	BLM	61	64.541	Equus_caballus
ENSGACG00000010863	blm	100	71.834	ENSEEUG00000001434	BLM	81	50.647	Erinaceus_europaeus
ENSGACG00000010863	blm	99	84.030	ENSELUG00000019098	blm	99	57.764	Esox_lucius
ENSGACG00000010863	blm	100	72.968	ENSFCAG00000006087	BLM	65	73.361	Felis_catus
ENSGACG00000010863	blm	100	71.537	ENSFALG00000010981	BLM	89	52.515	Ficedula_albicollis
ENSGACG00000010863	blm	85	79.470	ENSFDAG00000012658	BLM	61	77.108	Fukomys_damarensis
ENSGACG00000010863	blm	100	86.742	ENSFHEG00000002553	blm	99	67.129	Fundulus_heteroclitus
ENSGACG00000010863	blm	81	53.066	ENSGMOG00000010761	-	98	53.066	Gadus_morhua
ENSGACG00000010863	blm	81	51.282	ENSGMOG00000012988	-	100	51.370	Gadus_morhua
ENSGACG00000010863	blm	100	81.818	ENSGMOG00000016431	blm	99	67.918	Gadus_morhua
ENSGACG00000010863	blm	80	54.893	ENSGMOG00000010772	-	97	54.713	Gadus_morhua
ENSGACG00000010863	blm	80	50.481	ENSGMOG00000013063	-	99	49.767	Gadus_morhua
ENSGACG00000010863	blm	80	59.518	ENSGMOG00000010827	-	98	59.535	Gadus_morhua
ENSGACG00000010863	blm	100	70.888	ENSGALG00000008256	BLM	83	51.845	Gallus_gallus
ENSGACG00000010863	blm	100	88.258	ENSGAFG00000001117	blm	99	64.948	Gambusia_affinis
ENSGACG00000010863	blm	100	71.810	ENSGAGG00000005383	BLM	71	70.847	Gopherus_agassizii
ENSGACG00000010863	blm	100	73.913	ENSGGOG00000007710	BLM	76	76.221	Gorilla_gorilla
ENSGACG00000010863	blm	100	88.636	ENSHBUG00000015943	blm	99	70.576	Haplochromis_burtoni
ENSGACG00000010863	blm	100	73.913	ENSHGLG00000013231	BLM	68	64.751	Heterocephalus_glaber_female
ENSGACG00000010863	blm	100	85.985	ENSHCOG00000011455	blm	100	69.084	Hippocampus_comes
ENSGACG00000010863	blm	100	81.818	ENSIPUG00000000529	blm	86	67.360	Ictalurus_punctatus
ENSGACG00000010863	blm	100	73.157	ENSSTOG00000005000	BLM	63	64.496	Ictidomys_tridecemlineatus
ENSGACG00000010863	blm	81	80.226	ENSJJAG00000016322	Blm	94	54.748	Jaculus_jaculus
ENSGACG00000010863	blm	100	89.773	ENSKMAG00000016608	blm	99	66.829	Kryptolebias_marmoratus
ENSGACG00000010863	blm	100	89.015	ENSLBEG00000018729	blm	96	82.987	Labrus_bergylta
ENSGACG00000010863	blm	100	74.248	ENSLACG00000006490	BLM	90	62.712	Latimeria_chalumnae
ENSGACG00000010863	blm	100	77.273	ENSLOCG00000014302	blm	100	54.636	Lepisosteus_oculatus
ENSGACG00000010863	blm	100	73.535	ENSMFAG00000042982	BLM	75	77.049	Macaca_fascicularis
ENSGACG00000010863	blm	100	73.535	ENSMMUG00000019526	BLM	75	77.049	Macaca_mulatta
ENSGACG00000010863	blm	100	73.157	ENSMNEG00000031251	BLM	75	76.721	Macaca_nemestrina
ENSGACG00000010863	blm	100	67.486	ENSMLEG00000032934	BLM	65	56.997	Mandrillus_leucophaeus
ENSGACG00000010863	blm	100	90.720	ENSMAMG00000008726	blm	99	69.888	Mastacembelus_armatus
ENSGACG00000010863	blm	100	88.636	ENSMZEG00005022323	blm	99	69.731	Maylandia_zebra
ENSGACG00000010863	blm	67	68.258	ENSMGAG00000010473	BLM	100	60.469	Meleagris_gallopavo
ENSGACG00000010863	blm	100	73.574	ENSMAUG00000008953	Blm	80	51.591	Mesocricetus_auratus
ENSGACG00000010863	blm	100	72.968	ENSMICG00000034442	BLM	56	72.951	Microcebus_murinus
ENSGACG00000010863	blm	100	73.384	ENSMOCG00000016367	Blm	61	65.256	Microtus_ochrogaster
ENSGACG00000010863	blm	100	89.205	ENSMMOG00000006959	blm	99	69.495	Mola_mola
ENSGACG00000010863	blm	100	73.535	ENSMODG00000019449	BLM	88	50.708	Monodelphis_domestica
ENSGACG00000010863	blm	100	89.962	ENSMALG00000007323	blm	99	70.440	Monopterus_albus
ENSGACG00000010863	blm	100	73.004	MGP_CAROLIEiJ_G0029907	Blm	85	64.917	Mus_caroli
ENSGACG00000010863	blm	100	73.004	ENSMUSG00000030528	Blm	66	64.422	Mus_musculus
ENSGACG00000010863	blm	100	73.384	MGP_PahariEiJ_G0013129	Blm	64	65.140	Mus_pahari
ENSGACG00000010863	blm	100	73.004	MGP_SPRETEiJ_G0031009	Blm	80	50.720	Mus_spretus
ENSGACG00000010863	blm	100	72.590	ENSMPUG00000015657	BLM	64	71.712	Mustela_putorius_furo
ENSGACG00000010863	blm	100	73.384	ENSNGAG00000001275	Blm	99	45.745	Nannospalax_galili
ENSGACG00000010863	blm	100	88.447	ENSNBRG00000019702	blm	99	68.632	Neolamprologus_brichardi
ENSGACG00000010863	blm	100	69.943	ENSNLEG00000012087	BLM	82	56.997	Nomascus_leucogenys
ENSGACG00000010863	blm	98	68.533	ENSMEUG00000007253	BLM	69	60.157	Notamacropus_eugenii
ENSGACG00000010863	blm	92	74.021	ENSOPRG00000011667	BLM	61	64.374	Ochotona_princeps
ENSGACG00000010863	blm	100	67.675	ENSODEG00000015373	BLM	75	60.332	Octodon_degus
ENSGACG00000010863	blm	100	88.469	ENSONIG00000015193	blm	99	67.357	Oreochromis_niloticus
ENSGACG00000010863	blm	99	73.574	ENSOANG00000009316	-	100	64.570	Ornithorhynchus_anatinus
ENSGACG00000010863	blm	100	72.401	ENSOCUG00000013969	BLM	55	63.729	Oryctolagus_cuniculus
ENSGACG00000010863	blm	100	89.773	ENSORLG00000008110	blm	99	68.233	Oryzias_latipes
ENSGACG00000010863	blm	100	89.583	ENSORLG00020004812	blm	99	67.483	Oryzias_latipes_hni
ENSGACG00000010863	blm	100	89.962	ENSORLG00015018640	blm	99	73.730	Oryzias_latipes_hsok
ENSGACG00000010863	blm	100	89.015	ENSOMEG00000023545	blm	99	66.175	Oryzias_melastigma
ENSGACG00000010863	blm	100	72.968	ENSOGAG00000005708	BLM	69	58.512	Otolemur_garnettii
ENSGACG00000010863	blm	100	73.535	ENSOARG00000012875	BLM	68	64.668	Ovis_aries
ENSGACG00000010863	blm	100	73.724	ENSPPAG00000032173	BLM	65	73.770	Pan_paniscus
ENSGACG00000010863	blm	100	72.779	ENSPPRG00000002471	BLM	60	73.361	Panthera_pardus
ENSGACG00000010863	blm	100	72.590	ENSPTIG00000016168	BLM	60	72.709	Panthera_tigris_altaica
ENSGACG00000010863	blm	100	73.535	ENSPTRG00000007460	BLM	56	73.511	Pan_troglodytes
ENSGACG00000010863	blm	100	73.535	ENSPANG00000018572	BLM	75	77.049	Papio_anubis
ENSGACG00000010863	blm	99	82.700	ENSPKIG00000008954	blm	100	55.305	Paramormyrops_kingsleyae
ENSGACG00000010863	blm	85	70.337	ENSPSIG00000009792	BLM	99	70.819	Pelodiscus_sinensis
ENSGACG00000010863	blm	100	85.227	ENSPMGG00000006629	blm	100	68.655	Periophthalmus_magnuspinnatus
ENSGACG00000010863	blm	100	73.574	ENSPEMG00000017348	Blm	61	65.179	Peromyscus_maniculatus_bairdii
ENSGACG00000010863	blm	99	65.458	ENSPMAG00000000445	blm	88	62.901	Petromyzon_marinus
ENSGACG00000010863	blm	100	73.535	ENSPCIG00000006609	BLM	79	50.636	Phascolarctos_cinereus
ENSGACG00000010863	blm	100	88.068	ENSPFOG00000005059	blm	99	64.579	Poecilia_formosa
ENSGACG00000010863	blm	100	88.258	ENSPLAG00000017344	blm	99	64.370	Poecilia_latipinna
ENSGACG00000010863	blm	100	88.068	ENSPMEG00000000321	blm	99	66.040	Poecilia_mexicana
ENSGACG00000010863	blm	100	87.500	ENSPREG00000007715	blm	99	65.925	Poecilia_reticulata
ENSGACG00000010863	blm	100	72.023	ENSPPYG00000006784	BLM	60	64.286	Pongo_abelii
ENSGACG00000010863	blm	100	70.644	ENSPCAG00000008960	BLM	55	62.628	Procavia_capensis
ENSGACG00000010863	blm	100	61.059	ENSPCOG00000000439	BLM	67	56.306	Propithecus_coquereli
ENSGACG00000010863	blm	87	77.931	ENSPVAG00000011642	BLM	59	76.393	Pteropus_vampyrus
ENSGACG00000010863	blm	77	91.358	ENSPNYG00000010956	blm	99	62.045	Pundamilia_nyererei
ENSGACG00000010863	blm	100	84.091	ENSPNAG00000011714	blm	92	62.809	Pygocentrus_nattereri
ENSGACG00000010863	blm	100	73.194	ENSRNOG00000011213	Blm	87	51.276	Rattus_norvegicus
ENSGACG00000010863	blm	100	73.157	ENSRBIG00000029656	BLM	76	76.547	Rhinopithecus_bieti
ENSGACG00000010863	blm	100	73.157	ENSRROG00000037871	BLM	76	76.547	Rhinopithecus_roxellana
ENSGACG00000010863	blm	89	73.784	ENSSBOG00000030957	BLM	82	51.494	Saimiri_boliviensis_boliviensis
ENSGACG00000010863	blm	100	73.295	ENSSHAG00000007988	BLM	80	51.426	Sarcophilus_harrisii
ENSGACG00000010863	blm	100	82.008	ENSSFOG00015015462	blm	77	69.448	Scleropages_formosus
ENSGACG00000010863	blm	100	88.447	ENSSMAG00000001120	blm	99	70.365	Scophthalmus_maximus
ENSGACG00000010863	blm	100	89.205	ENSSDUG00000010955	blm	99	71.379	Seriola_dumerili
ENSGACG00000010863	blm	100	89.015	ENSSLDG00000000634	blm	99	71.171	Seriola_lalandi_dorsalis
ENSGACG00000010863	blm	100	65.028	ENSSARG00000006398	BLM	66	54.994	Sorex_araneus
ENSGACG00000010863	blm	100	67.297	ENSSPUG00000000013	BLM	100	48.082	Sphenodon_punctatus
ENSGACG00000010863	blm	100	89.962	ENSSPAG00000013999	blm	99	72.714	Stegastes_partitus
ENSGACG00000010863	blm	100	73.954	ENSSSCG00000001816	BLM	67	64.883	Sus_scrofa
ENSGACG00000010863	blm	81	75.060	ENSTGUG00000009959	-	99	46.530	Taeniopygia_guttata
ENSGACG00000010863	blm	100	88.447	ENSTRUG00000019860	blm	100	65.430	Takifugu_rubripes
ENSGACG00000010863	blm	100	87.311	ENSTNIG00000019246	blm	99	66.045	Tetraodon_nigroviridis
ENSGACG00000010863	blm	100	73.157	ENSTTRG00000016386	BLM	84	64.668	Tursiops_truncatus
ENSGACG00000010863	blm	100	72.968	ENSUMAG00000009105	BLM	96	66.850	Ursus_maritimus
ENSGACG00000010863	blm	100	68.620	ENSVPAG00000000085	BLM	55	61.224	Vicugna_pacos
ENSGACG00000010863	blm	100	72.779	ENSVVUG00000006402	BLM	67	63.760	Vulpes_vulpes
ENSGACG00000010863	blm	100	75.475	ENSXETG00000007847	blm	70	63.869	Xenopus_tropicalis
ENSGACG00000010863	blm	100	82.765	ENSXCOG00000020227	blm	99	64.241	Xiphophorus_couchianus
ENSGACG00000010863	blm	100	87.500	ENSXMAG00000002951	blm	99	66.295	Xiphophorus_maculatus