EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011124 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt-like transcription factor 4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5635 bases
Position: chrgroupXII:14533989-14539623
Accession: ZDB-GENE-060328-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014709	zf-C2H2	PF00096.26	1.7e-32	1	6
ENSGACP00000014709	zf-C2H2	PF00096.26	1.7e-32	2	6
ENSGACP00000014709	zf-C2H2	PF00096.26	1.7e-32	3	6
ENSGACP00000014709	zf-C2H2	PF00096.26	1.7e-32	4	6
ENSGACP00000014709	zf-C2H2	PF00096.26	1.7e-32	5	6
ENSGACP00000014709	zf-C2H2	PF00096.26	1.7e-32	6	6
ENSGACP00000014709	zf-met	PF12874.7	1.6e-13	1	2
ENSGACP00000014709	zf-met	PF12874.7	1.6e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014737	-	3273	-	ENSGACP00000014709	1090 (aa)	-	G3PAT5

Gene Model

Click here to download ENSGACG00000011124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011124	sall4	59	50.000	ENSGACG00000005553	znf236	100	50.000
ENSGACG00000011124	sall4	64	65.385	ENSGACG00000005503	sall3a	60	65.385
ENSGACG00000011124	sall4	99	65.385	ENSGACG00000016702	sall1a	89	65.385
ENSGACG00000011124	sall4	57	48.980	ENSGACG00000010051	-	99	48.980
ENSGACG00000011124	sall4	55	46.939	ENSGACG00000018816	-	97	48.148
ENSGACG00000011124	sall4	56	52.000	ENSGACG00000010384	-	99	52.000
ENSGACG00000011124	sall4	59	69.919	ENSGACG00000002533	sall3b	88	65.385
ENSGACG00000011124	sall4	56	47.059	ENSGACG00000004549	-	99	44.643
ENSGACG00000011124	sall4	55	46.809	ENSGACG00000001523	-	94	46.429
ENSGACG00000011124	sall4	59	45.098	ENSGACG00000004765	-	99	45.098
ENSGACG00000011124	sall4	59	51.020	ENSGACG00000004761	-	99	51.020
ENSGACG00000011124	sall4	62	46.429	ENSGACG00000009449	znf526	67	47.170
ENSGACG00000011124	sall4	57	56.863	ENSGACG00000012517	-	99	56.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011124	sall4	100	42.623	ENSG00000101115	SALL4	90	67.308	Homo_sapiens
ENSGACG00000011124	sall4	100	77.078	ENSAPOG00000002465	sall4	100	77.078	Acanthochromis_polyacanthus
ENSGACG00000011124	sall4	100	42.610	ENSAMEG00000013250	-	99	43.916	Ailuropoda_melanoleuca
ENSGACG00000011124	sall4	100	75.160	ENSACIG00000017298	sall4	100	75.160	Amphilophus_citrinellus
ENSGACG00000011124	sall4	100	77.260	ENSAOCG00000023678	sall4	100	77.260	Amphiprion_ocellaris
ENSGACG00000011124	sall4	100	77.626	ENSAPEG00000000751	sall4	100	77.626	Amphiprion_percula
ENSGACG00000011124	sall4	100	78.265	ENSATEG00000024480	sall4	100	78.265	Anabas_testudineus
ENSGACG00000011124	sall4	99	50.131	ENSAPLG00000006498	SALL4	100	50.131	Anas_platyrhynchos
ENSGACG00000011124	sall4	100	50.955	ENSACAG00000012748	SALL4	100	50.649	Anolis_carolinensis
ENSGACG00000011124	sall4	100	42.487	ENSANAG00000023352	SALL4	91	67.308	Aotus_nancymaae
ENSGACG00000011124	sall4	100	74.155	ENSACLG00000017851	sall4	100	74.155	Astatotilapia_calliptera
ENSGACG00000011124	sall4	99	63.271	ENSAMXG00000001254	sall4	99	63.636	Astyanax_mexicanus
ENSGACG00000011124	sall4	100	40.515	ENSBTAG00000003101	SALL4	100	40.241	Bos_taurus
ENSGACG00000011124	sall4	80	44.664	ENSCJAG00000000591	SALL4	97	44.273	Callithrix_jacchus
ENSGACG00000011124	sall4	100	42.832	ENSCAFG00000011738	-	100	42.745	Canis_familiaris
ENSGACG00000011124	sall4	100	42.745	ENSCAFG00020021870	SALL4	100	42.657	Canis_lupus_dingo
ENSGACG00000011124	sall4	100	39.629	ENSCHIG00000026270	SALL4	100	38.745	Capra_hircus
ENSGACG00000011124	sall4	100	41.233	ENSTSYG00000007359	SALL4	91	67.308	Carlito_syrichta
ENSGACG00000011124	sall4	97	41.989	ENSCAPG00000012135	SALL4	95	41.705	Cavia_aperea
ENSGACG00000011124	sall4	100	38.256	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSGACG00000011124	sall4	100	43.241	ENSCATG00000030757	SALL4	91	67.308	Cercocebus_atys
ENSGACG00000011124	sall4	100	42.284	ENSCLAG00000010479	SALL4	91	51.667	Chinchilla_lanigera
ENSGACG00000011124	sall4	100	42.007	ENSCSAG00000015269	SALL4	100	41.617	Chlorocebus_sabaeus
ENSGACG00000011124	sall4	99	50.843	ENSCPBG00000014995	SALL4	99	50.872	Chrysemys_picta_bellii
ENSGACG00000011124	sall4	100	43.054	ENSCANG00000036463	SALL4	100	42.660	Colobus_angolensis_palliatus
ENSGACG00000011124	sall4	100	40.850	ENSCGRG00001019569	Sall4	100	52.511	Cricetulus_griseus_chok1gshd
ENSGACG00000011124	sall4	100	40.590	ENSCGRG00000000462	Sall4	92	77.778	Cricetulus_griseus_crigri
ENSGACG00000011124	sall4	100	76.113	ENSCSEG00000014604	sall4	100	76.113	Cynoglossus_semilaevis
ENSGACG00000011124	sall4	100	72.901	ENSCVAG00000010815	sall4	100	73.084	Cyprinodon_variegatus
ENSGACG00000011124	sall4	99	62.072	ENSDARG00000044485	sall4	99	61.261	Danio_rerio
ENSGACG00000011124	sall4	100	42.354	ENSDNOG00000040633	SALL4	100	42.623	Dasypus_novemcinctus
ENSGACG00000011124	sall4	62	78.378	ENSDORG00000012841	Sall4	100	78.378	Dipodomys_ordii
ENSGACG00000011124	sall4	60	65.385	ENSETEG00000012475	-	55	65.385	Echinops_telfairi
ENSGACG00000011124	sall4	64	58.621	ENSEBUG00000015425	-	100	50.000	Eptatretus_burgeri
ENSGACG00000011124	sall4	100	42.648	ENSECAG00000018533	SALL4	100	42.288	Equus_caballus
ENSGACG00000011124	sall4	100	41.573	ENSEEUG00000003649	SALL4	99	39.637	Erinaceus_europaeus
ENSGACG00000011124	sall4	100	63.901	ENSELUG00000005696	sall4	100	63.901	Esox_lucius
ENSGACG00000011124	sall4	100	42.092	ENSFCAG00000002822	SALL4	86	67.308	Felis_catus
ENSGACG00000011124	sall4	100	48.817	ENSFALG00000013149	SALL4	100	49.870	Ficedula_albicollis
ENSGACG00000011124	sall4	100	40.773	ENSFDAG00000017812	SALL4	91	63.462	Fukomys_damarensis
ENSGACG00000011124	sall4	100	72.587	ENSFHEG00000014187	sall4	100	72.404	Fundulus_heteroclitus
ENSGACG00000011124	sall4	100	68.944	ENSGMOG00000003822	sall4	100	69.035	Gadus_morhua
ENSGACG00000011124	sall4	100	49.956	ENSGALG00000041365	SALL4	100	49.869	Gallus_gallus
ENSGACG00000011124	sall4	100	73.564	ENSGAFG00000019925	sall4	100	73.655	Gambusia_affinis
ENSGACG00000011124	sall4	99	50.840	ENSGAGG00000002297	SALL4	99	50.618	Gopherus_agassizii
ENSGACG00000011124	sall4	100	42.450	ENSGGOG00000001832	SALL4	90	67.308	Gorilla_gorilla
ENSGACG00000011124	sall4	100	74.338	ENSHBUG00000007327	sall4	100	74.338	Haplochromis_burtoni
ENSGACG00000011124	sall4	98	42.819	ENSHGLG00000009043	SALL4	96	42.138	Heterocephalus_glaber_female
ENSGACG00000011124	sall4	98	42.819	ENSHGLG00100002722	SALL4	96	42.124	Heterocephalus_glaber_male
ENSGACG00000011124	sall4	100	72.901	ENSHCOG00000008519	sall4	100	72.354	Hippocampus_comes
ENSGACG00000011124	sall4	99	62.072	ENSIPUG00000019170	sall4	99	62.252	Ictalurus_punctatus
ENSGACG00000011124	sall4	66	53.333	ENSSTOG00000025002	SALL4	92	83.099	Ictidomys_tridecemlineatus
ENSGACG00000011124	sall4	100	42.624	ENSJJAG00000020688	Sall4	92	84.507	Jaculus_jaculus
ENSGACG00000011124	sall4	100	75.160	ENSKMAG00000002501	sall4	100	75.616	Kryptolebias_marmoratus
ENSGACG00000011124	sall4	100	77.078	ENSLBEG00000019951	sall4	100	77.078	Labrus_bergylta
ENSGACG00000011124	sall4	96	47.212	ENSLACG00000013898	SALL4	99	65.556	Latimeria_chalumnae
ENSGACG00000011124	sall4	100	59.857	ENSLOCG00000002427	sall4	100	60.234	Lepisosteus_oculatus
ENSGACG00000011124	sall4	100	43.057	ENSLAFG00000004309	SALL4	100	42.570	Loxodonta_africana
ENSGACG00000011124	sall4	100	43.117	ENSMFAG00000027169	SALL4	100	42.721	Macaca_fascicularis
ENSGACG00000011124	sall4	87	44.444	ENSMMUG00000003870	SALL4	91	67.308	Macaca_mulatta
ENSGACG00000011124	sall4	87	44.444	ENSMNEG00000035995	SALL4	91	67.308	Macaca_nemestrina
ENSGACG00000011124	sall4	100	43.203	ENSMLEG00000030467	SALL4	100	42.808	Mandrillus_leucophaeus
ENSGACG00000011124	sall4	100	78.371	ENSMAMG00000005223	sall4	100	78.371	Mastacembelus_armatus
ENSGACG00000011124	sall4	100	74.064	ENSMZEG00005023418	sall4	100	74.064	Maylandia_zebra
ENSGACG00000011124	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSGACG00000011124	sall4	100	40.716	ENSMAUG00000015814	Sall4	94	74.699	Mesocricetus_auratus
ENSGACG00000011124	sall4	100	42.294	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSGACG00000011124	sall4	100	41.268	ENSMOCG00000018245	Sall4	92	82.192	Microtus_ochrogaster
ENSGACG00000011124	sall4	100	77.148	ENSMMOG00000014929	sall4	100	77.148	Mola_mola
ENSGACG00000011124	sall4	99	46.055	ENSMODG00000016387	SALL4	97	46.432	Monodelphis_domestica
ENSGACG00000011124	sall4	100	79.106	ENSMALG00000018709	sall4	100	79.810	Monopterus_albus
ENSGACG00000011124	sall4	100	40.921	MGP_CAROLIEiJ_G0024723	Sall4	92	84.722	Mus_caroli
ENSGACG00000011124	sall4	100	41.738	ENSMUSG00000027547	Sall4	92	84.722	Mus_musculus
ENSGACG00000011124	sall4	100	40.306	MGP_PahariEiJ_G0026164	Sall4	92	84.722	Mus_pahari
ENSGACG00000011124	sall4	100	41.482	MGP_SPRETEiJ_G0025643	Sall4	92	84.722	Mus_spretus
ENSGACG00000011124	sall4	100	41.955	ENSMPUG00000017543	SALL4	96	41.969	Mustela_putorius_furo
ENSGACG00000011124	sall4	99	33.961	ENSMLUG00000028073	-	99	33.213	Myotis_lucifugus
ENSGACG00000011124	sall4	78	59.615	ENSMLUG00000008405	-	84	57.692	Myotis_lucifugus
ENSGACG00000011124	sall4	97	43.094	ENSMLUG00000007060	-	98	43.002	Myotis_lucifugus
ENSGACG00000011124	sall4	100	41.355	ENSNGAG00000017833	Sall4	88	67.308	Nannospalax_galili
ENSGACG00000011124	sall4	100	74.429	ENSNBRG00000001829	sall4	100	74.429	Neolamprologus_brichardi
ENSGACG00000011124	sall4	100	42.771	ENSNLEG00000007013	SALL4	100	42.288	Nomascus_leucogenys
ENSGACG00000011124	sall4	85	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSGACG00000011124	sall4	100	42.820	ENSOPRG00000011640	SALL4	100	42.808	Ochotona_princeps
ENSGACG00000011124	sall4	100	74.977	ENSONIG00000016557	sall4	100	75.251	Oreochromis_niloticus
ENSGACG00000011124	sall4	99	50.880	ENSOANG00000008667	SALL4	97	50.973	Ornithorhynchus_anatinus
ENSGACG00000011124	sall4	97	42.739	ENSOCUG00000011797	SALL4	98	42.410	Oryctolagus_cuniculus
ENSGACG00000011124	sall4	100	70.712	ENSORLG00000016130	sall4	100	71.168	Oryzias_latipes
ENSGACG00000011124	sall4	100	70.894	ENSORLG00020007339	sall4	100	71.350	Oryzias_latipes_hni
ENSGACG00000011124	sall4	100	70.529	ENSORLG00015002265	sall4	100	70.985	Oryzias_latipes_hsok
ENSGACG00000011124	sall4	100	72.329	ENSOMEG00000017344	sall4	100	72.785	Oryzias_melastigma
ENSGACG00000011124	sall4	97	44.291	ENSOGAG00000013799	SALL4	99	43.779	Otolemur_garnettii
ENSGACG00000011124	sall4	100	38.690	ENSOARG00000014570	SALL4	100	38.179	Ovis_aries
ENSGACG00000011124	sall4	100	42.450	ENSPPAG00000038064	SALL4	90	67.308	Pan_paniscus
ENSGACG00000011124	sall4	100	41.659	ENSPPRG00000008677	SALL4	86	67.308	Panthera_pardus
ENSGACG00000011124	sall4	100	42.450	ENSPTRG00000013631	SALL4	90	67.308	Pan_troglodytes
ENSGACG00000011124	sall4	87	44.444	ENSPANG00000021792	SALL4	91	67.308	Papio_anubis
ENSGACG00000011124	sall4	100	60.503	ENSPKIG00000007074	sall4	100	60.682	Paramormyrops_kingsleyae
ENSGACG00000011124	sall4	99	51.094	ENSPSIG00000009066	SALL4	99	50.874	Pelodiscus_sinensis
ENSGACG00000011124	sall4	100	65.965	ENSPMGG00000022551	sall4	100	64.091	Periophthalmus_magnuspinnatus
ENSGACG00000011124	sall4	100	41.278	ENSPEMG00000022706	Sall4	86	67.308	Peromyscus_maniculatus_bairdii
ENSGACG00000011124	sall4	99	47.856	ENSPCIG00000022838	SALL4	97	48.065	Phascolarctos_cinereus
ENSGACG00000011124	sall4	100	73.723	ENSPFOG00000001442	sall4	100	73.540	Poecilia_formosa
ENSGACG00000011124	sall4	100	73.631	ENSPLAG00000008760	sall4	100	73.449	Poecilia_latipinna
ENSGACG00000011124	sall4	100	73.723	ENSPMEG00000008497	sall4	100	73.540	Poecilia_mexicana
ENSGACG00000011124	sall4	100	73.540	ENSPREG00000021140	sall4	100	73.358	Poecilia_reticulata
ENSGACG00000011124	sall4	100	42.684	ENSPPYG00000011138	SALL4	100	42.548	Pongo_abelii
ENSGACG00000011124	sall4	100	40.433	ENSPCAG00000004726	SALL4	99	40.279	Procavia_capensis
ENSGACG00000011124	sall4	100	42.832	ENSPCOG00000016321	SALL4	84	67.308	Propithecus_coquereli
ENSGACG00000011124	sall4	94	41.312	ENSPVAG00000002075	SALL4	94	41.182	Pteropus_vampyrus
ENSGACG00000011124	sall4	100	74.155	ENSPNYG00000021738	sall4	100	74.155	Pundamilia_nyererei
ENSGACG00000011124	sall4	99	63.931	ENSPNAG00000020929	sall4	99	63.899	Pygocentrus_nattereri
ENSGACG00000011124	sall4	100	40.700	ENSRNOG00000050035	Sall4	86	65.385	Rattus_norvegicus
ENSGACG00000011124	sall4	100	43.203	ENSRBIG00000039876	SALL4	100	42.808	Rhinopithecus_bieti
ENSGACG00000011124	sall4	100	43.203	ENSRROG00000036585	SALL4	100	42.808	Rhinopithecus_roxellana
ENSGACG00000011124	sall4	100	42.498	ENSSBOG00000030011	SALL4	85	67.308	Saimiri_boliviensis_boliviensis
ENSGACG00000011124	sall4	94	65.385	ENSSHAG00000018013	SALL4	88	65.385	Sarcophilus_harrisii
ENSGACG00000011124	sall4	100	60.936	ENSSFOG00015021075	sall4	100	61.206	Scleropages_formosus
ENSGACG00000011124	sall4	100	79.616	ENSSMAG00000019218	sall4	99	79.616	Scophthalmus_maximus
ENSGACG00000011124	sall4	100	81.370	ENSSDUG00000004657	sall4	100	81.370	Seriola_dumerili
ENSGACG00000011124	sall4	100	81.005	ENSSLDG00000004973	sall4	100	81.005	Seriola_lalandi_dorsalis
ENSGACG00000011124	sall4	100	78.813	ENSSPAG00000001978	sall4	100	78.813	Stegastes_partitus
ENSGACG00000011124	sall4	100	41.445	ENSSSCG00000007479	SALL4	100	41.136	Sus_scrofa
ENSGACG00000011124	sall4	100	75.000	ENSTRUG00000007410	sall4	100	75.000	Takifugu_rubripes
ENSGACG00000011124	sall4	100	73.790	ENSTNIG00000012460	sall4	100	74.064	Tetraodon_nigroviridis
ENSGACG00000011124	sall4	97	39.094	ENSTTRG00000007753	SALL4	98	37.739	Tursiops_truncatus
ENSGACG00000011124	sall4	100	42.046	ENSUAMG00000010113	SALL4	100	41.977	Ursus_americanus
ENSGACG00000011124	sall4	97	42.468	ENSUMAG00000024274	SALL4	98	42.153	Ursus_maritimus
ENSGACG00000011124	sall4	100	48.906	ENSXETG00000012326	sall4	100	48.415	Xenopus_tropicalis
ENSGACG00000011124	sall4	100	66.000	ENSXCOG00000015467	sall4	100	66.000	Xiphophorus_couchianus
ENSGACG00000011124	sall4	100	65.668	ENSXMAG00000012692	sall4	100	65.668	Xiphophorus_maculatus