EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011187 (Gene tree)
Gene ID: -
Gene Symbol: zbtb48
Alias: fd07a08|wu:fd07a08|wu:fe16d08
Full Name: zinc finger and BTB domain containing 48
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3515 bases
Position: chrgroupXII:14857475-14860989
Accession: ZDB-GENE-030131-4450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014798	zf-C2H2	PF00096.26	9.8e-37	1	5
ENSGACP00000014798	zf-C2H2	PF00096.26	9.8e-37	2	5
ENSGACP00000014798	zf-C2H2	PF00096.26	9.8e-37	3	5
ENSGACP00000014798	zf-C2H2	PF00096.26	9.8e-37	4	5
ENSGACP00000014798	zf-C2H2	PF00096.26	9.8e-37	5	5
ENSGACP00000014798	zf-met	PF12874.7	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014826	-	1794	-	ENSGACP00000014798	598 (aa)	-	G3PB24

Gene Model

Click here to download ENSGACG00000011187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011187	zbtb48	57	33.445	ENSGACG00000001377	-	94	33.445
ENSGACG00000011187	zbtb48	54	36.321	ENSGACG00000001371	-	100	36.321
ENSGACG00000011187	zbtb48	58	40.379	ENSGACG00000013652	-	99	41.270
ENSGACG00000011187	zbtb48	56	37.551	ENSGACG00000013659	-	93	42.683
ENSGACG00000011187	zbtb48	64	33.962	ENSGACG00000003258	znf319b	83	33.962
ENSGACG00000011187	zbtb48	57	40.698	ENSGACG00000004765	-	100	40.237
ENSGACG00000011187	zbtb48	54	42.105	ENSGACG00000004761	-	100	41.720
ENSGACG00000011187	zbtb48	54	35.691	ENSGACG00000001523	-	99	35.691
ENSGACG00000011187	zbtb48	54	31.629	ENSGACG00000015729	-	99	31.629
ENSGACG00000011187	zbtb48	59	41.615	ENSGACG00000010051	-	82	40.486
ENSGACG00000011187	zbtb48	54	38.189	ENSGACG00000004478	-	98	38.189
ENSGACG00000011187	zbtb48	56	40.237	ENSGACG00000010393	-	100	40.237
ENSGACG00000011187	zbtb48	59	37.107	ENSGACG00000019550	-	96	37.107
ENSGACG00000011187	zbtb48	71	33.533	ENSGACG00000003372	zbtb47b	72	33.533
ENSGACG00000011187	zbtb48	59	39.130	ENSGACG00000005239	-	96	39.130
ENSGACG00000011187	zbtb48	56	34.211	ENSGACG00000019863	-	99	34.211
ENSGACG00000011187	zbtb48	56	36.863	ENSGACG00000001358	-	100	40.288
ENSGACG00000011187	zbtb48	57	33.524	ENSGACG00000012611	-	86	33.898
ENSGACG00000011187	zbtb48	55	34.241	ENSGACG00000018088	si:dkey-7i4.5	99	34.241
ENSGACG00000011187	zbtb48	97	39.837	ENSGACG00000011635	zbtb7b	96	39.837
ENSGACG00000011187	zbtb48	95	30.952	ENSGACG00000006824	znf131	76	35.345
ENSGACG00000011187	zbtb48	97	33.333	ENSGACG00000016102	zbtb41	79	33.333
ENSGACG00000011187	zbtb48	55	38.889	ENSGACG00000018415	-	99	38.889
ENSGACG00000011187	zbtb48	95	32.432	ENSGACG00000017368	-	96	31.897
ENSGACG00000011187	zbtb48	54	42.807	ENSGACG00000014395	-	100	42.807
ENSGACG00000011187	zbtb48	51	39.744	ENSGACG00000008982	scrt1b	59	39.744
ENSGACG00000011187	zbtb48	63	36.842	ENSGACG00000014840	maza	99	32.164
ENSGACG00000011187	zbtb48	57	35.714	ENSGACG00000018816	-	100	35.714
ENSGACG00000011187	zbtb48	53	30.357	ENSGACG00000004268	hic2	54	32.051
ENSGACG00000011187	zbtb48	53	32.178	ENSGACG00000016248	-	100	32.020
ENSGACG00000011187	zbtb48	54	33.469	ENSGACG00000001166	-	100	33.469
ENSGACG00000011187	zbtb48	67	39.113	ENSGACG00000010352	si:ch211-207i20.2	80	39.113
ENSGACG00000011187	zbtb48	63	33.758	ENSGACG00000009449	znf526	91	33.758
ENSGACG00000011187	zbtb48	50	32.773	ENSGACG00000017935	snai2	56	32.773
ENSGACG00000011187	zbtb48	57	43.478	ENSGACG00000006283	-	96	37.791
ENSGACG00000011187	zbtb48	98	32.824	ENSGACG00000011640	zbtb24	89	39.252
ENSGACG00000011187	zbtb48	59	38.312	ENSGACG00000004549	-	99	38.312
ENSGACG00000011187	zbtb48	53	31.965	ENSGACG00000010515	ZNF628	99	31.965
ENSGACG00000011187	zbtb48	52	39.744	ENSGACG00000004072	-	55	39.744
ENSGACG00000011187	zbtb48	60	38.922	ENSGACG00000015674	gfi1aa	56	38.922
ENSGACG00000011187	zbtb48	61	34.188	ENSGACG00000005553	znf236	99	31.805
ENSGACG00000011187	zbtb48	54	38.164	ENSGACG00000010384	-	99	38.164
ENSGACG00000011187	zbtb48	54	37.143	ENSGACG00000005742	-	55	37.143
ENSGACG00000011187	zbtb48	65	34.320	ENSGACG00000008733	znf646	79	34.320
ENSGACG00000011187	zbtb48	57	40.132	ENSGACG00000013660	-	100	40.132
ENSGACG00000011187	zbtb48	97	34.672	ENSGACG00000012415	GZF1	99	40.212
ENSGACG00000011187	zbtb48	55	38.247	ENSGACG00000012517	-	100	38.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011187	zbtb48	91	90.123	ENSAPOG00000002861	zbtb48	100	90.123	Acanthochromis_polyacanthus
ENSGACG00000011187	zbtb48	100	70.451	ENSAOCG00000008304	zbtb48	89	70.451	Amphiprion_ocellaris
ENSGACG00000011187	zbtb48	100	71.210	ENSATEG00000024413	zbtb48	84	71.210	Anabas_testudineus
ENSGACG00000011187	zbtb48	94	51.515	ENSCAPG00000012228	ZBTB48	90	52.641	Cavia_aperea
ENSGACG00000011187	zbtb48	99	55.590	ENSDARG00000039263	zbtb48	85	54.141	Danio_rerio
ENSGACG00000011187	zbtb48	100	53.651	ENSDORG00000009677	Zbtb48	90	53.407	Dipodomys_ordii
ENSGACG00000011187	zbtb48	55	74.545	ENSFALG00000009796	ZBTB48	70	74.545	Ficedula_albicollis
ENSGACG00000011187	zbtb48	80	73.939	ENSGALG00000000637	ZBTB48	94	51.630	Gallus_gallus
ENSGACG00000011187	zbtb48	100	65.197	ENSKMAG00000002963	zbtb48	86	66.244	Kryptolebias_marmoratus
ENSGACG00000011187	zbtb48	100	55.593	ENSLBEG00000012151	zbtb48	88	65.609	Labrus_bergylta
ENSGACG00000011187	zbtb48	55	73.939	ENSMGAG00000001275	ZBTB48	81	73.939	Meleagris_gallopavo
ENSGACG00000011187	zbtb48	100	75.208	ENSMMOG00000014996	zbtb48	95	75.208	Mola_mola
ENSGACG00000011187	zbtb48	100	64.950	ENSORLG00000019331	zbtb48	94	65.282	Oryzias_latipes
ENSGACG00000011187	zbtb48	99	64.706	ENSORLG00020007790	zbtb48	93	64.874	Oryzias_latipes_hni
ENSGACG00000011187	zbtb48	99	61.167	ENSORLG00015002568	zbtb48	93	61.667	Oryzias_latipes_hsok
ENSGACG00000011187	zbtb48	100	63.158	ENSOMEG00000017762	zbtb48	94	63.242	Oryzias_melastigma
ENSGACG00000011187	zbtb48	98	53.990	ENSPMGG00000019913	zbtb48	82	53.990	Periophthalmus_magnuspinnatus
ENSGACG00000011187	zbtb48	64	65.553	ENSPVAG00000013020	ZBTB48	85	65.553	Pteropus_vampyrus
ENSGACG00000011187	zbtb48	100	73.846	ENSSDUG00000004449	zbtb48	83	75.000	Seriola_dumerili
ENSGACG00000011187	zbtb48	100	76.421	ENSSLDG00000017718	zbtb48	94	76.421	Seriola_lalandi_dorsalis
ENSGACG00000011187	zbtb48	74	66.970	ENSSPUG00000011853	ZBTB48	77	66.970	Sphenodon_punctatus
ENSGACG00000011187	zbtb48	55	74.545	ENSTGUG00000002589	ZBTB48	77	65.736	Taeniopygia_guttata
ENSGACG00000011187	zbtb48	100	68.300	ENSTRUG00000008615	zbtb48	88	68.837	Takifugu_rubripes
ENSGACG00000011187	zbtb48	100	66.822	ENSTNIG00000012449	zbtb48	99	66.822	Tetraodon_nigroviridis
ENSGACG00000011187	zbtb48	87	53.650	ENSTBEG00000014014	ZBTB48	83	53.650	Tupaia_belangeri