EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011261 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3284 bases
Position: chrgroupXI:9641414-9644697
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014885	RRM_1	PF00076.22	7.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000014913	RNPS1-201	1182	-	ENSGACP00000014885	281 (aa)	-	G3PBB1

Gene Model

Click here to download ENSGACG00000011261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011261	RNPS1	83	61.885	ENSGACG00000005641	-	82	63.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011261	RNPS1	83	78.448	ENSAPOG00000017310	RNPS1	74	75.758	Acanthochromis_polyacanthus
ENSGACG00000011261	RNPS1	77	70.833	ENSACIG00000014367	-	77	74.312	Amphilophus_citrinellus
ENSGACG00000011261	RNPS1	83	88.793	ENSAOCG00000002404	RNPS1	83	76.724	Amphiprion_ocellaris
ENSGACG00000011261	RNPS1	82	88.745	ENSAPEG00000006497	RNPS1	80	76.623	Amphiprion_percula
ENSGACG00000011261	RNPS1	83	92.672	ENSATEG00000024267	RNPS1	83	80.172	Anabas_testudineus
ENSGACG00000011261	RNPS1	71	64.851	ENSANAG00000028802	RNPS1	85	67.083	Aotus_nancymaae
ENSGACG00000011261	RNPS1	83	78.017	ENSACLG00000025942	RNPS1	82	75.431	Astatotilapia_calliptera
ENSGACG00000011261	RNPS1	83	76.170	ENSAMXG00000006330	-	81	63.725	Astyanax_mexicanus
ENSGACG00000011261	RNPS1	71	64.356	ENSCCAG00000034480	RNPS1	85	67.083	Cebus_capucinus
ENSGACG00000011261	RNPS1	71	65.517	ENSCATG00000013756	RNPS1	85	67.500	Cercocebus_atys
ENSGACG00000011261	RNPS1	91	64.615	ENSCATG00000042361	-	80	64.435	Cercocebus_atys
ENSGACG00000011261	RNPS1	97	72.101	ENSCSAG00000005219	-	81	66.667	Chlorocebus_sabaeus
ENSGACG00000011261	RNPS1	59	57.143	ENSCING00000016317	-	81	57.692	Ciona_intestinalis
ENSGACG00000011261	RNPS1	82	64.807	ENSCSEG00000000402	RNPS1	76	67.811	Cynoglossus_semilaevis
ENSGACG00000011261	RNPS1	82	85.281	ENSCSEG00000015997	RNPS1	80	73.593	Cynoglossus_semilaevis
ENSGACG00000011261	RNPS1	77	89.401	ENSCVAG00000010868	RNPS1	77	80.184	Cyprinodon_variegatus
ENSGACG00000011261	RNPS1	77	90.323	ENSFHEG00000011705	RNPS1	77	79.724	Fundulus_heteroclitus
ENSGACG00000011261	RNPS1	77	88.018	ENSGAFG00000005457	RNPS1	77	79.724	Gambusia_affinis
ENSGACG00000011261	RNPS1	83	78.017	ENSHBUG00000002494	RNPS1	82	75.431	Haplochromis_burtoni
ENSGACG00000011261	RNPS1	54	79.739	ENSHGLG00100015267	-	86	63.750	Heterocephalus_glaber_male
ENSGACG00000011261	RNPS1	83	78.151	ENSHCOG00000004424	RNPS1	83	73.529	Hippocampus_comes
ENSGACG00000011261	RNPS1	83	86.207	ENSKMAG00000009135	RNPS1	82	77.586	Kryptolebias_marmoratus
ENSGACG00000011261	RNPS1	75	75.943	ENSLBEG00000024091	RNPS1	77	75.926	Labrus_bergylta
ENSGACG00000011261	RNPS1	83	68.085	ENSLACG00000007112	RNPS1	83	69.492	Latimeria_chalumnae
ENSGACG00000011261	RNPS1	84	67.083	ENSMFAG00000044121	-	83	60.331	Macaca_fascicularis
ENSGACG00000011261	RNPS1	86	68.571	ENSMMUG00000041726	-	84	64.854	Macaca_mulatta
ENSGACG00000011261	RNPS1	86	68.571	ENSMNEG00000024827	-	84	64.854	Macaca_nemestrina
ENSGACG00000011261	RNPS1	73	66.346	ENSMLEG00000040232	-	81	62.802	Mandrillus_leucophaeus
ENSGACG00000011261	RNPS1	71	65.517	ENSMLEG00000036928	RNPS1	85	67.500	Mandrillus_leucophaeus
ENSGACG00000011261	RNPS1	82	76.395	ENSMAMG00000021148	-	81	69.957	Mastacembelus_armatus
ENSGACG00000011261	RNPS1	83	94.828	ENSMAMG00000021609	-	83	81.897	Mastacembelus_armatus
ENSGACG00000011261	RNPS1	83	78.017	ENSMZEG00005012742	RNPS1	82	75.431	Maylandia_zebra
ENSGACG00000011261	RNPS1	76	76.168	ENSMMOG00000010863	RNPS1	77	76.389	Mola_mola
ENSGACG00000011261	RNPS1	77	75.000	ENSNBRG00000023437	RNPS1	77	75.000	Neolamprologus_brichardi
ENSGACG00000011261	RNPS1	88	66.667	ENSNLEG00000009243	RNPS1	98	65.984	Nomascus_leucogenys
ENSGACG00000011261	RNPS1	59	54.491	ENSODEG00000002513	-	52	49.580	Octodon_degus
ENSGACG00000011261	RNPS1	83	76.293	ENSORLG00000008033	RNPS1	94	74.879	Oryzias_latipes
ENSGACG00000011261	RNPS1	82	76.190	ENSORLG00020020207	RNPS1	82	71.429	Oryzias_latipes_hni
ENSGACG00000011261	RNPS1	82	76.623	ENSORLG00015000305	-	82	71.861	Oryzias_latipes_hsok
ENSGACG00000011261	RNPS1	58	68.098	ENSPTIG00000015643	RNPS1	65	81.452	Panthera_tigris_altaica
ENSGACG00000011261	RNPS1	71	65.517	ENSPTRG00000031310	RNPS1	85	67.500	Pan_troglodytes
ENSGACG00000011261	RNPS1	83	74.894	ENSPKIG00000023465	RNPS1	83	70.213	Paramormyrops_kingsleyae
ENSGACG00000011261	RNPS1	58	69.325	ENSPCIG00000016114	-	60	79.839	Phascolarctos_cinereus
ENSGACG00000011261	RNPS1	77	88.940	ENSPFOG00000009978	RNPS1	77	80.645	Poecilia_formosa
ENSGACG00000011261	RNPS1	77	88.940	ENSPLAG00000009343	RNPS1	77	80.645	Poecilia_latipinna
ENSGACG00000011261	RNPS1	77	88.940	ENSPMEG00000008552	RNPS1	77	80.645	Poecilia_mexicana
ENSGACG00000011261	RNPS1	77	88.940	ENSPREG00000001843	RNPS1	77	80.645	Poecilia_reticulata
ENSGACG00000011261	RNPS1	83	78.017	ENSPNYG00000000585	RNPS1	82	75.431	Pundamilia_nyererei
ENSGACG00000011261	RNPS1	83	74.894	ENSPNAG00000025479	RNPS1	82	67.660	Pygocentrus_nattereri
ENSGACG00000011261	RNPS1	82	78.632	ENSSFOG00015019341	-	73	71.795	Scleropages_formosus
ENSGACG00000011261	RNPS1	83	76.596	ENSSFOG00015022746	RNPS1	85	76.596	Scleropages_formosus
ENSGACG00000011261	RNPS1	83	82.328	ENSSMAG00000016933	RNPS1	82	80.172	Scophthalmus_maximus
ENSGACG00000011261	RNPS1	83	93.534	ENSSDUG00000011453	RNPS1	83	80.603	Seriola_dumerili
ENSGACG00000011261	RNPS1	80	81.778	ENSSLDG00000021341	RNPS1	81	79.111	Seriola_lalandi_dorsalis
ENSGACG00000011261	RNPS1	83	91.379	ENSSPAG00000009383	RNPS1	83	78.879	Stegastes_partitus
ENSGACG00000011261	RNPS1	83	75.107	ENSTRUG00000008602	RNPS1	83	77.682	Takifugu_rubripes
ENSGACG00000011261	RNPS1	82	75.862	ENSTNIG00000009753	RNPS1	81	78.448	Tetraodon_nigroviridis
ENSGACG00000011261	RNPS1	82	70.638	ENSXETG00000024439	rnps1	71	73.853	Xenopus_tropicalis
ENSGACG00000011261	RNPS1	83	85.776	ENSXMAG00000004827	RNPS1	82	78.017	Xiphophorus_maculatus