EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011343 (Gene tree)
Gene ID: -
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2819 bases
Position: chrgroupI:12522462-12525280
Accession: ZDB-GENE-030131-8898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000014991	Methyltransf_8	PF05148.15	2e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015019	-	1421	-	ENSGACP00000014991	367 (aa)	-	G3PBL7

Gene Model

Click here to download ENSGACG00000011343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011343	rrp8	72	53.623	ENSG00000132275	RRP8	76	57.798	Homo_sapiens
ENSGACG00000011343	rrp8	93	73.883	ENSAPOG00000010806	rrp8	51	73.883	Acanthochromis_polyacanthus
ENSGACG00000011343	rrp8	93	73.883	ENSAPOG00000008509	-	52	73.883	Acanthochromis_polyacanthus
ENSGACG00000011343	rrp8	93	73.883	ENSAPOG00000010798	-	51	73.883	Acanthochromis_polyacanthus
ENSGACG00000011343	rrp8	65	56.967	ENSAMEG00000016307	RRP8	53	56.967	Ailuropoda_melanoleuca
ENSGACG00000011343	rrp8	98	61.520	ENSACIG00000019896	rrp8	86	61.823	Amphilophus_citrinellus
ENSGACG00000011343	rrp8	78	73.883	ENSAOCG00000008785	rrp8	76	58.255	Amphiprion_ocellaris
ENSGACG00000011343	rrp8	78	73.540	ENSAPEG00000008416	rrp8	52	73.540	Amphiprion_percula
ENSGACG00000011343	rrp8	89	60.599	ENSATEG00000014110	rrp8	75	60.599	Anabas_testudineus
ENSGACG00000011343	rrp8	66	57.377	ENSANAG00000028524	RRP8	76	58.333	Aotus_nancymaae
ENSGACG00000011343	rrp8	95	64.872	ENSACLG00000002746	rrp8	73	64.872	Astatotilapia_calliptera
ENSGACG00000011343	rrp8	95	55.065	ENSAMXG00000005164	rrp8	74	55.065	Astyanax_mexicanus
ENSGACG00000011343	rrp8	70	53.435	ENSBTAG00000000697	RRP8	57	53.435	Bos_taurus
ENSGACG00000011343	rrp8	65	46.888	WBGene00020296	T07A9.8	80	43.617	Caenorhabditis_elegans
ENSGACG00000011343	rrp8	66	56.967	ENSCJAG00000014012	RRP8	76	57.407	Callithrix_jacchus
ENSGACG00000011343	rrp8	65	56.557	ENSCAFG00020009685	RRP8	53	56.557	Canis_lupus_dingo
ENSGACG00000011343	rrp8	63	56.780	ENSCHIG00000019002	RRP8	54	53.788	Capra_hircus
ENSGACG00000011343	rrp8	67	54.400	ENSTSYG00000003391	RRP8	76	56.881	Carlito_syrichta
ENSGACG00000011343	rrp8	54	60.500	ENSCAPG00000013284	RRP8	52	60.500	Cavia_aperea
ENSGACG00000011343	rrp8	65	56.017	ENSCPOG00000012515	RRP8	52	56.017	Cavia_porcellus
ENSGACG00000011343	rrp8	66	56.967	ENSCCAG00000035197	RRP8	77	57.798	Cebus_capucinus
ENSGACG00000011343	rrp8	70	56.015	ENSCATG00000029344	RRP8	76	58.333	Cercocebus_atys
ENSGACG00000011343	rrp8	70	55.133	ENSCLAG00000016099	RRP8	57	55.133	Chinchilla_lanigera
ENSGACG00000011343	rrp8	70	55.639	ENSCSAG00000004345	RRP8	58	55.639	Chlorocebus_sabaeus
ENSGACG00000011343	rrp8	70	39.568	ENSCING00000003281	-	88	39.568	Ciona_intestinalis
ENSGACG00000011343	rrp8	98	41.667	ENSCSAVG00000006435	-	94	41.667	Ciona_savignyi
ENSGACG00000011343	rrp8	70	55.639	ENSCANG00000040771	RRP8	76	58.333	Colobus_angolensis_palliatus
ENSGACG00000011343	rrp8	90	46.471	ENSCGRG00001003103	Rrp8	72	46.471	Cricetulus_griseus_chok1gshd
ENSGACG00000011343	rrp8	90	46.765	ENSCGRG00000014009	Rrp8	72	46.765	Cricetulus_griseus_crigri
ENSGACG00000011343	rrp8	83	68.506	ENSCSEG00000007330	rrp8	90	62.396	Cynoglossus_semilaevis
ENSGACG00000011343	rrp8	95	69.718	ENSCVAG00000012032	rrp8	67	58.355	Cyprinodon_variegatus
ENSGACG00000011343	rrp8	93	51.250	ENSDARG00000071652	rrp8	80	68.468	Danio_rerio
ENSGACG00000011343	rrp8	85	49.547	ENSDORG00000000103	Rrp8	73	49.547	Dipodomys_ordii
ENSGACG00000011343	rrp8	63	45.455	FBgn0034422	CG7137	65	45.455	Drosophila_melanogaster
ENSGACG00000011343	rrp8	65	56.148	ENSETEG00000008877	RRP8	53	56.148	Echinops_telfairi
ENSGACG00000011343	rrp8	65	56.557	ENSEASG00005001761	RRP8	76	56.881	Equus_asinus_asinus
ENSGACG00000011343	rrp8	65	53.279	ENSFCAG00000015384	RRP8	76	56.881	Felis_catus
ENSGACG00000011343	rrp8	98	58.266	ENSGMOG00000007188	rrp8	99	58.197	Gadus_morhua
ENSGACG00000011343	rrp8	84	53.039	ENSGAFG00000012331	rrp8	80	53.039	Gambusia_affinis
ENSGACG00000011343	rrp8	72	53.986	ENSGGOG00000000389	RRP8	76	57.798	Gorilla_gorilla
ENSGACG00000011343	rrp8	95	64.872	ENSHBUG00000017131	rrp8	73	64.615	Haplochromis_burtoni
ENSGACG00000011343	rrp8	66	57.143	ENSHGLG00000003980	RRP8	53	57.143	Heterocephalus_glaber_female
ENSGACG00000011343	rrp8	66	57.143	ENSHGLG00100015659	RRP8	53	57.143	Heterocephalus_glaber_male
ENSGACG00000011343	rrp8	99	54.637	ENSHCOG00000001293	rrp8	76	55.556	Hippocampus_comes
ENSGACG00000011343	rrp8	93	50.769	ENSIPUG00000017733	rrp8	74	50.769	Ictalurus_punctatus
ENSGACG00000011343	rrp8	75	51.228	ENSSTOG00000016272	RRP8	62	51.228	Ictidomys_tridecemlineatus
ENSGACG00000011343	rrp8	68	54.545	ENSJJAG00000020608	-	55	54.545	Jaculus_jaculus
ENSGACG00000011343	rrp8	95	58.151	ENSKMAG00000009229	rrp8	74	58.151	Kryptolebias_marmoratus
ENSGACG00000011343	rrp8	98	65.934	ENSLBEG00000019937	rrp8	91	66.116	Labrus_bergylta
ENSGACG00000011343	rrp8	93	45.478	ENSLACG00000001252	-	99	46.512	Latimeria_chalumnae
ENSGACG00000011343	rrp8	63	54.894	ENSLOCG00000013776	-	100	45.983	Lepisosteus_oculatus
ENSGACG00000011343	rrp8	95	49.870	ENSLOCG00000009591	rrp8	73	49.870	Lepisosteus_oculatus
ENSGACG00000011343	rrp8	65	56.557	ENSLAFG00000000112	RRP8	53	56.557	Loxodonta_africana
ENSGACG00000011343	rrp8	70	56.391	ENSMFAG00000046084	RRP8	76	58.333	Macaca_fascicularis
ENSGACG00000011343	rrp8	70	56.391	ENSMMUG00000007738	RRP8	76	58.333	Macaca_mulatta
ENSGACG00000011343	rrp8	70	56.015	ENSMNEG00000029648	RRP8	76	58.333	Macaca_nemestrina
ENSGACG00000011343	rrp8	70	56.015	ENSMLEG00000035110	RRP8	76	58.333	Mandrillus_leucophaeus
ENSGACG00000011343	rrp8	98	73.720	ENSMAMG00000009679	rrp8	52	73.720	Mastacembelus_armatus
ENSGACG00000011343	rrp8	95	64.615	ENSMZEG00005008926	rrp8	73	64.615	Maylandia_zebra
ENSGACG00000011343	rrp8	90	47.076	ENSMAUG00000000324	Rrp8	72	46.398	Mesocricetus_auratus
ENSGACG00000011343	rrp8	66	54.694	ENSMICG00000038472	RRP8	78	54.054	Microcebus_murinus
ENSGACG00000011343	rrp8	90	47.522	ENSMOCG00000002486	Rrp8	72	47.522	Microtus_ochrogaster
ENSGACG00000011343	rrp8	95	63.776	ENSMMOG00000015709	rrp8	80	63.054	Mola_mola
ENSGACG00000011343	rrp8	98	76.678	ENSMALG00000015984	rrp8	68	76.678	Monopterus_albus
ENSGACG00000011343	rrp8	84	48.615	MGP_CAROLIEiJ_G0030236	Rrp8	70	48.615	Mus_caroli
ENSGACG00000011343	rrp8	84	48.615	ENSMUSG00000030888	Rrp8	70	48.615	Mus_musculus
ENSGACG00000011343	rrp8	68	55.118	MGP_PahariEiJ_G0013451	Rrp8	55	55.118	Mus_pahari
ENSGACG00000011343	rrp8	72	53.261	MGP_SPRETEiJ_G0031348	Rrp8	60	53.261	Mus_spretus
ENSGACG00000011343	rrp8	90	47.493	ENSMPUG00000005510	RRP8	71	47.493	Mustela_putorius_furo
ENSGACG00000011343	rrp8	67	55.200	ENSMLUG00000008938	RRP8	55	55.200	Myotis_lucifugus
ENSGACG00000011343	rrp8	70	54.307	ENSNGAG00000012450	Rrp8	58	54.307	Nannospalax_galili
ENSGACG00000011343	rrp8	97	62.624	ENSNBRG00000023416	rrp8	98	63.291	Neolamprologus_brichardi
ENSGACG00000011343	rrp8	72	53.623	ENSNLEG00000017445	RRP8	61	53.623	Nomascus_leucogenys
ENSGACG00000011343	rrp8	67	51.012	ENSMEUG00000004945	-	92	51.012	Notamacropus_eugenii
ENSGACG00000011343	rrp8	66	56.048	ENSOPRG00000008052	RRP8	53	57.025	Ochotona_princeps
ENSGACG00000011343	rrp8	70	53.992	ENSODEG00000011209	RRP8	52	57.025	Octodon_degus
ENSGACG00000011343	rrp8	66	60.764	ENSONIG00000016861	rrp8	70	60.764	Oreochromis_niloticus
ENSGACG00000011343	rrp8	66	55.645	ENSOCUG00000027619	RRP8	55	55.645	Oryctolagus_cuniculus
ENSGACG00000011343	rrp8	96	56.039	ENSORLG00000004175	rrp8	74	56.627	Oryzias_latipes
ENSGACG00000011343	rrp8	100	53.811	ENSORLG00020011413	rrp8	78	54.042	Oryzias_latipes_hni
ENSGACG00000011343	rrp8	100	54.734	ENSORLG00015015410	rrp8	77	55.196	Oryzias_latipes_hsok
ENSGACG00000011343	rrp8	100	54.110	ENSOMEG00000003161	rrp8	78	54.691	Oryzias_melastigma
ENSGACG00000011343	rrp8	66	55.967	ENSOGAG00000007184	RRP8	54	55.967	Otolemur_garnettii
ENSGACG00000011343	rrp8	72	54.380	ENSPPAG00000040792	RRP8	76	58.879	Pan_paniscus
ENSGACG00000011343	rrp8	65	56.846	ENSPPRG00000022654	RRP8	76	56.881	Panthera_pardus
ENSGACG00000011343	rrp8	65	56.846	ENSPTIG00000011321	RRP8	76	56.881	Panthera_tigris_altaica
ENSGACG00000011343	rrp8	72	53.986	ENSPTRG00000003297	RRP8	76	57.798	Pan_troglodytes
ENSGACG00000011343	rrp8	70	55.639	ENSPANG00000006537	RRP8	76	58.333	Papio_anubis
ENSGACG00000011343	rrp8	95	51.074	ENSPKIG00000024217	rrp8	74	51.074	Paramormyrops_kingsleyae
ENSGACG00000011343	rrp8	72	53.261	ENSPEMG00000017257	Rrp8	60	53.261	Peromyscus_maniculatus_bairdii
ENSGACG00000011343	rrp8	93	57.107	ENSPFOG00000007308	rrp8	73	57.606	Poecilia_formosa
ENSGACG00000011343	rrp8	93	57.606	ENSPLAG00000011349	rrp8	73	57.606	Poecilia_latipinna
ENSGACG00000011343	rrp8	93	57.357	ENSPMEG00000009888	rrp8	73	57.855	Poecilia_mexicana
ENSGACG00000011343	rrp8	74	56.667	ENSPREG00000008450	rrp8	68	56.667	Poecilia_reticulata
ENSGACG00000011343	rrp8	72	53.986	ENSPPYG00000003538	RRP8	60	53.986	Pongo_abelii
ENSGACG00000011343	rrp8	63	58.228	ENSPCAG00000016176	RRP8	73	48.795	Procavia_capensis
ENSGACG00000011343	rrp8	66	55.510	ENSPCOG00000024627	RRP8	76	55.963	Propithecus_coquereli
ENSGACG00000011343	rrp8	95	64.359	ENSPNYG00000002878	rrp8	72	64.103	Pundamilia_nyererei
ENSGACG00000011343	rrp8	94	54.569	ENSPNAG00000024779	rrp8	73	55.325	Pygocentrus_nattereri
ENSGACG00000011343	rrp8	90	46.429	ENSRNOG00000018766	Rrp8	100	59.908	Rattus_norvegicus
ENSGACG00000011343	rrp8	70	55.263	ENSRBIG00000044485	RRP8	76	57.407	Rhinopithecus_bieti
ENSGACG00000011343	rrp8	70	55.263	ENSRROG00000045322	RRP8	76	57.407	Rhinopithecus_roxellana
ENSGACG00000011343	rrp8	56	39.331	YDR083W	-	58	40.611	Saccharomyces_cerevisiae
ENSGACG00000011343	rrp8	66	57.377	ENSSBOG00000035280	RRP8	76	58.333	Saimiri_boliviensis_boliviensis
ENSGACG00000011343	rrp8	73	52.482	ENSSHAG00000009273	-	57	51.418	Sarcophilus_harrisii
ENSGACG00000011343	rrp8	93	50.488	ENSSFOG00015003917	rrp8	72	50.488	Scleropages_formosus
ENSGACG00000011343	rrp8	100	61.647	ENSSMAG00000004859	rrp8	77	61.647	Scophthalmus_maximus
ENSGACG00000011343	rrp8	95	61.244	ENSSDUG00000010477	rrp8	74	61.483	Seriola_dumerili
ENSGACG00000011343	rrp8	98	59.719	ENSSLDG00000000521	rrp8	77	59.953	Seriola_lalandi_dorsalis
ENSGACG00000011343	rrp8	65	56.148	ENSSARG00000007949	RRP8	53	56.148	Sorex_araneus
ENSGACG00000011343	rrp8	99	64.228	ENSSPAG00000006664	rrp8	93	64.228	Stegastes_partitus
ENSGACG00000011343	rrp8	66	56.098	ENSSSCG00000023880	RRP8	60	52.518	Sus_scrofa
ENSGACG00000011343	rrp8	59	54.464	ENSTGUG00000000591	RRP8	100	54.464	Taeniopygia_guttata
ENSGACG00000011343	rrp8	99	59.102	ENSTRUG00000021812	rrp8	78	59.102	Takifugu_rubripes
ENSGACG00000011343	rrp8	66	55.242	ENSTBEG00000000237	RRP8	59	55.242	Tupaia_belangeri
ENSGACG00000011343	rrp8	70	54.135	ENSTTRG00000004867	RRP8	57	54.135	Tursiops_truncatus
ENSGACG00000011343	rrp8	65	56.967	ENSUAMG00000025756	RRP8	76	56.881	Ursus_americanus
ENSGACG00000011343	rrp8	65	56.967	ENSUMAG00000000528	RRP8	51	56.967	Ursus_maritimus
ENSGACG00000011343	rrp8	63	58.723	ENSVPAG00000008019	RRP8	54	56.452	Vicugna_pacos
ENSGACG00000011343	rrp8	65	56.557	ENSVVUG00000024346	RRP8	55	56.557	Vulpes_vulpes
ENSGACG00000011343	rrp8	90	56.842	ENSXCOG00000006156	rrp8	89	59.831	Xiphophorus_couchianus
ENSGACG00000011343	rrp8	95	56.927	ENSXMAG00000005011	rrp8	83	58.186	Xiphophorus_maculatus