EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011385 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6830 bases
Position: chrgroupVIII:14421114-14427943
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015057	RRM_1	PF00076.22	6.2e-14	1	1
ENSGACP00000015057	SAP	PF02037.27	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015085	-	2529	-	ENSGACP00000015057	842 (aa)	-	G3PBT3

Gene Model

Click here to download ENSGACG00000011385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011385	safb	67	40.916	ENSG00000160633	SAFB	78	63.934	Homo_sapiens
ENSGACG00000011385	safb	100	77.310	ENSAPOG00000022508	safb	100	76.842	Acanthochromis_polyacanthus
ENSGACG00000011385	safb	67	42.419	ENSAMEG00000012254	SAFB	98	42.066	Ailuropoda_melanoleuca
ENSGACG00000011385	safb	100	70.178	ENSACIG00000006247	safb	100	71.108	Amphilophus_citrinellus
ENSGACG00000011385	safb	95	75.303	ENSAOCG00000006308	safb	99	74.939	Amphiprion_ocellaris
ENSGACG00000011385	safb	100	75.576	ENSAPEG00000023342	safb	100	75.346	Amphiprion_percula
ENSGACG00000011385	safb	100	77.404	ENSATEG00000004998	safb	100	77.057	Anabas_testudineus
ENSGACG00000011385	safb	60	44.526	ENSAPLG00000006355	-	100	48.179	Anas_platyrhynchos
ENSGACG00000011385	safb	50	41.556	ENSAPLG00000005780	-	98	42.953	Anas_platyrhynchos
ENSGACG00000011385	safb	67	42.536	ENSANAG00000028821	SAFB	95	42.966	Aotus_nancymaae
ENSGACG00000011385	safb	100	73.609	ENSACLG00000001926	safb	100	73.964	Astatotilapia_calliptera
ENSGACG00000011385	safb	97	59.133	ENSAMXG00000018154	safb	98	61.477	Astyanax_mexicanus
ENSGACG00000011385	safb	95	41.889	ENSBTAG00000007875	SAFB	95	42.018	Bos_taurus
ENSGACG00000011385	safb	67	42.332	ENSCAFG00000018803	SAFB	83	41.998	Canis_familiaris
ENSGACG00000011385	safb	67	42.332	ENSCAFG00020018943	SAFB	97	41.870	Canis_lupus_dingo
ENSGACG00000011385	safb	95	42.158	ENSCHIG00000007262	SAFB	95	42.431	Capra_hircus
ENSGACG00000011385	safb	53	42.970	ENSTSYG00000001851	-	92	42.043	Carlito_syrichta
ENSGACG00000011385	safb	67	41.935	ENSCCAG00000020193	SAFB	95	42.560	Cebus_capucinus
ENSGACG00000011385	safb	66	40.735	ENSCATG00000029994	SAFB	95	41.998	Cercocebus_atys
ENSGACG00000011385	safb	66	40.735	ENSCSAG00000009949	SAFB	95	41.998	Chlorocebus_sabaeus
ENSGACG00000011385	safb	60	31.716	ENSCHOG00000003208	SAFB	88	37.719	Choloepus_hoffmanni
ENSGACG00000011385	safb	92	42.263	ENSCPBG00000010928	-	98	43.858	Chrysemys_picta_bellii
ENSGACG00000011385	safb	91	45.989	ENSCPBG00000010936	-	97	47.392	Chrysemys_picta_bellii
ENSGACG00000011385	safb	81	41.340	ENSCANG00000004774	-	61	63.768	Colobus_angolensis_palliatus
ENSGACG00000011385	safb	98	40.292	ENSCANG00000019754	-	95	40.879	Colobus_angolensis_palliatus
ENSGACG00000011385	safb	64	38.769	ENSCGRG00001002254	Safb	95	42.842	Cricetulus_griseus_chok1gshd
ENSGACG00000011385	safb	99	65.868	ENSCSEG00000019870	safb	100	64.910	Cynoglossus_semilaevis
ENSGACG00000011385	safb	100	60.921	ENSCVAG00000002226	safb	100	60.397	Cyprinodon_variegatus
ENSGACG00000011385	safb	96	60.119	ENSDARG00000020467	safb	98	60.578	Danio_rerio
ENSGACG00000011385	safb	66	41.653	ENSDNOG00000015746	SAFB	95	41.761	Dasypus_novemcinctus
ENSGACG00000011385	safb	64	41.034	ENSDORG00000016200	Safb	95	38.429	Dipodomys_ordii
ENSGACG00000011385	safb	64	41.983	ENSEASG00005023019	SAFB	97	40.764	Equus_asinus_asinus
ENSGACG00000011385	safb	99	62.471	ENSELUG00000022327	safb	99	63.164	Esox_lucius
ENSGACG00000011385	safb	67	41.667	ENSFCAG00000011835	SAFB	97	41.818	Felis_catus
ENSGACG00000011385	safb	65	43.137	ENSFALG00000013882	-	88	44.802	Ficedula_albicollis
ENSGACG00000011385	safb	57	39.964	ENSFALG00000013881	-	97	45.341	Ficedula_albicollis
ENSGACG00000011385	safb	100	63.744	ENSFHEG00000004219	safb	100	63.540	Fundulus_heteroclitus
ENSGACG00000011385	safb	100	68.868	ENSGMOG00000014280	safb	100	70.082	Gadus_morhua
ENSGACG00000011385	safb	66	44.608	ENSGALG00000013365	-	97	45.338	Gallus_gallus
ENSGACG00000011385	safb	64	43.131	ENSGALG00000001948	-	96	46.421	Gallus_gallus
ENSGACG00000011385	safb	100	61.802	ENSGAFG00000016162	safb	100	60.992	Gambusia_affinis
ENSGACG00000011385	safb	97	48.253	ENSGAGG00000008424	-	98	49.017	Gopherus_agassizii
ENSGACG00000011385	safb	69	47.003	ENSGAGG00000017702	-	95	49.921	Gopherus_agassizii
ENSGACG00000011385	safb	67	42.003	ENSGGOG00000015109	SAFB	95	42.375	Gorilla_gorilla
ENSGACG00000011385	safb	66	68.036	ENSHBUG00000009218	safb	100	67.689	Haplochromis_burtoni
ENSGACG00000011385	safb	94	60.804	ENSHCOG00000001705	safb	99	60.994	Hippocampus_comes
ENSGACG00000011385	safb	99	58.633	ENSIPUG00000024869	safb2	99	60.253	Ictalurus_punctatus
ENSGACG00000011385	safb	100	70.507	ENSKMAG00000022308	safb	100	70.091	Kryptolebias_marmoratus
ENSGACG00000011385	safb	100	75.463	ENSLBEG00000006015	safb	100	75.465	Labrus_bergylta
ENSGACG00000011385	safb	66	43.042	ENSLACG00000018090	SAFB	98	47.363	Latimeria_chalumnae
ENSGACG00000011385	safb	98	60.299	ENSLOCG00000003613	safb	99	60.364	Lepisosteus_oculatus
ENSGACG00000011385	safb	64	41.026	ENSLAFG00000003840	SAFB	96	41.596	Loxodonta_africana
ENSGACG00000011385	safb	67	40.453	ENSMFAG00000003885	SAFB	95	42.077	Macaca_fascicularis
ENSGACG00000011385	safb	67	41.129	ENSMMUG00000017970	SAFB	95	42.530	Macaca_mulatta
ENSGACG00000011385	safb	66	40.000	ENSMNEG00000035637	SAFB	95	41.530	Macaca_nemestrina
ENSGACG00000011385	safb	67	38.449	ENSMLEG00000038637	SAFB	95	41.028	Mandrillus_leucophaeus
ENSGACG00000011385	safb	100	75.491	ENSMAMG00000003357	safb	91	75.029	Mastacembelus_armatus
ENSGACG00000011385	safb	100	73.648	ENSMZEG00005009120	safb	100	74.223	Maylandia_zebra
ENSGACG00000011385	safb	97	41.394	ENSMGAG00000001101	-	95	44.621	Meleagris_gallopavo
ENSGACG00000011385	safb	64	43.564	ENSMGAG00000001051	-	96	48.251	Meleagris_gallopavo
ENSGACG00000011385	safb	86	37.628	ENSMICG00000046795	-	70	63.380	Microcebus_murinus
ENSGACG00000011385	safb	67	41.734	ENSMICG00000008739	-	97	42.473	Microcebus_murinus
ENSGACG00000011385	safb	94	42.186	ENSMODG00000001236	SAFB	95	42.389	Monodelphis_domestica
ENSGACG00000011385	safb	100	75.377	ENSMALG00000020330	safb	100	74.913	Monopterus_albus
ENSGACG00000011385	safb	98	41.567	ENSMLUG00000001081	SAFB	95	42.002	Myotis_lucifugus
ENSGACG00000011385	safb	67	41.680	ENSNLEG00000013551	SAFB	97	42.556	Nomascus_leucogenys
ENSGACG00000011385	safb	60	38.137	ENSOPRG00000011561	-	99	40.776	Ochotona_princeps
ENSGACG00000011385	safb	100	74.335	ENSONIG00000002318	safb	100	74.682	Oreochromis_niloticus
ENSGACG00000011385	safb	87	38.101	ENSOCUG00000014628	SAFB	97	36.799	Oryctolagus_cuniculus
ENSGACG00000011385	safb	98	69.268	ENSORLG00000016989	safb	100	68.897	Oryzias_latipes
ENSGACG00000011385	safb	67	65.310	ENSORLG00020000404	safb	100	63.325	Oryzias_latipes_hni
ENSGACG00000011385	safb	98	69.508	ENSORLG00015010733	safb	100	69.294	Oryzias_latipes_hsok
ENSGACG00000011385	safb	100	68.575	ENSOMEG00000009066	safb	100	68.224	Oryzias_melastigma
ENSGACG00000011385	safb	64	41.993	ENSOGAG00000027769	SAFB	97	41.764	Otolemur_garnettii
ENSGACG00000011385	safb	81	38.472	ENSOARG00000007856	-	99	37.945	Ovis_aries
ENSGACG00000011385	safb	95	39.266	ENSOARG00000007662	-	95	39.290	Ovis_aries
ENSGACG00000011385	safb	67	41.801	ENSPPAG00000035129	SAFB	95	42.167	Pan_paniscus
ENSGACG00000011385	safb	67	41.786	ENSPPRG00000017197	SAFB	97	41.818	Panthera_pardus
ENSGACG00000011385	safb	67	41.038	ENSPTRG00000010335	SAFB	95	42.167	Pan_troglodytes
ENSGACG00000011385	safb	67	40.600	ENSPANG00000007770	SAFB	95	42.043	Papio_anubis
ENSGACG00000011385	safb	100	60.694	ENSPKIG00000009902	safb	100	61.330	Paramormyrops_kingsleyae
ENSGACG00000011385	safb	99	44.952	ENSPSIG00000009367	-	97	44.904	Pelodiscus_sinensis
ENSGACG00000011385	safb	99	46.568	ENSPSIG00000011679	-	98	48.391	Pelodiscus_sinensis
ENSGACG00000011385	safb	57	46.703	ENSPCIG00000009504	-	95	52.772	Phascolarctos_cinereus
ENSGACG00000011385	safb	100	63.958	ENSPFOG00000007745	safb	100	63.446	Poecilia_formosa
ENSGACG00000011385	safb	100	61.356	ENSPLAG00000001614	safb	100	60.894	Poecilia_latipinna
ENSGACG00000011385	safb	100	63.958	ENSPMEG00000021023	safb	100	63.329	Poecilia_mexicana
ENSGACG00000011385	safb	100	62.514	ENSPREG00000012496	safb	100	62.286	Poecilia_reticulata
ENSGACG00000011385	safb	66	41.214	ENSPPYG00000009428	SAFB	95	42.213	Pongo_abelii
ENSGACG00000011385	safb	64	37.338	ENSPCAG00000006475	SAFB	95	39.592	Procavia_capensis
ENSGACG00000011385	safb	95	40.133	ENSPCOG00000014090	SAFB	97	39.024	Propithecus_coquereli
ENSGACG00000011385	safb	69	50.909	ENSPVAG00000004913	SAFB	71	50.909	Pteropus_vampyrus
ENSGACG00000011385	safb	99	59.007	ENSPNAG00000021838	safb	98	61.397	Pygocentrus_nattereri
ENSGACG00000011385	safb	67	40.902	ENSRBIG00000042509	SAFB	95	42.500	Rhinopithecus_bieti
ENSGACG00000011385	safb	67	40.600	ENSRROG00000029278	SAFB	95	42.043	Rhinopithecus_roxellana
ENSGACG00000011385	safb	67	41.760	ENSSBOG00000026291	SAFB	95	42.546	Saimiri_boliviensis_boliviensis
ENSGACG00000011385	safb	99	59.659	ENSSFOG00015008156	safb	99	60.596	Scleropages_formosus
ENSGACG00000011385	safb	100	78.723	ENSSMAG00000009316	safb	100	78.723	Scophthalmus_maximus
ENSGACG00000011385	safb	100	76.010	ENSSDUG00000009652	safb	100	76.010	Seriola_dumerili
ENSGACG00000011385	safb	100	79.265	ENSSLDG00000001670	safb	100	79.384	Seriola_lalandi_dorsalis
ENSGACG00000011385	safb	60	38.503	ENSSARG00000010475	SAFB	98	39.342	Sorex_araneus
ENSGACG00000011385	safb	55	41.843	ENSSPUG00000009747	-	99	41.778	Sphenodon_punctatus
ENSGACG00000011385	safb	52	42.720	ENSSPUG00000009820	-	98	47.837	Sphenodon_punctatus
ENSGACG00000011385	safb	99	70.637	ENSSPAG00000015682	safb	99	69.965	Stegastes_partitus
ENSGACG00000011385	safb	64	42.574	ENSSSCG00000013522	SAFB	96	44.374	Sus_scrofa
ENSGACG00000011385	safb	64	42.190	ENSTGUG00000000502	-	97	44.662	Taeniopygia_guttata
ENSGACG00000011385	safb	64	43.118	ENSTGUG00000000489	-	96	48.968	Taeniopygia_guttata
ENSGACG00000011385	safb	100	71.295	ENSTRUG00000003567	safb	100	70.964	Takifugu_rubripes
ENSGACG00000011385	safb	91	62.347	ENSTNIG00000015470	safb	100	63.081	Tetraodon_nigroviridis
ENSGACG00000011385	safb	64	72.222	ENSTTRG00000013588	SAFB	63	72.222	Tursiops_truncatus
ENSGACG00000011385	safb	74	42.642	ENSUMAG00000009734	SAFB	85	42.070	Ursus_maritimus
ENSGACG00000011385	safb	67	42.492	ENSVVUG00000013720	SAFB	83	42.122	Vulpes_vulpes
ENSGACG00000011385	safb	100	64.193	ENSXMAG00000003458	safb	100	63.562	Xiphophorus_maculatus