EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011474 (Gene tree)
Gene ID: -
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 12364 bases
Position: chrgroupXIII:12961346-12973709
Accession: ZDB-GENE-081105-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015197	ResIII	PF04851.15	4.4e-26	1	2
ENSGACP00000015197	ResIII	PF04851.15	4.4e-26	2	2
ENSGACP00000015197	DEAD	PF00270.29	1.5e-53	1	2
ENSGACP00000015197	DEAD	PF00270.29	1.5e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015226	-	6803	-	ENSGACP00000015197	2147 (aa)	-	G3PC73

Gene Model

Click here to download ENSGACG00000011474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011474	snrnp200	87	42.937	ENSGACG00000014141	ascc3	80	45.270
ENSGACG00000011474	snrnp200	58	33.023	ENSGACG00000015686	hfm1	69	33.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011474	snrnp200	99	89.911	ENSG00000144028	SNRNP200	100	90.005	Homo_sapiens
ENSGACG00000011474	snrnp200	99	97.711	ENSAPOG00000010223	snrnp200	100	97.711	Acanthochromis_polyacanthus
ENSGACG00000011474	snrnp200	99	89.958	ENSAMEG00000008996	SNRNP200	100	90.051	Ailuropoda_melanoleuca
ENSGACG00000011474	snrnp200	97	97.111	ENSACIG00000001764	snrnp200	98	97.111	Amphilophus_citrinellus
ENSGACG00000011474	snrnp200	99	97.525	ENSAOCG00000024593	snrnp200	100	97.525	Amphiprion_ocellaris
ENSGACG00000011474	snrnp200	97	97.218	ENSAPEG00000012554	snrnp200	100	97.218	Amphiprion_percula
ENSGACG00000011474	snrnp200	99	97.431	ENSATEG00000022522	snrnp200	100	97.431	Anabas_testudineus
ENSGACG00000011474	snrnp200	99	90.028	ENSAPLG00000004313	SNRNP200	100	90.122	Anas_platyrhynchos
ENSGACG00000011474	snrnp200	99	89.367	ENSACAG00000000434	SNRNP200	100	89.483	Anolis_carolinensis
ENSGACG00000011474	snrnp200	99	87.185	ENSANAG00000036625	SNRNP200	100	87.279	Aotus_nancymaae
ENSGACG00000011474	snrnp200	99	96.824	ENSACLG00000011188	snrnp200	100	96.824	Astatotilapia_calliptera
ENSGACG00000011474	snrnp200	99	94.231	ENSAMXG00000005684	snrnp200	100	94.162	Astyanax_mexicanus
ENSGACG00000011474	snrnp200	99	89.678	ENSBTAG00000000848	SNRNP200	100	89.771	Bos_taurus
ENSGACG00000011474	snrnp200	99	89.865	ENSCJAG00000007514	SNRNP200	100	89.958	Callithrix_jacchus
ENSGACG00000011474	snrnp200	99	89.204	ENSCAFG00020019979	SNRNP200	100	91.322	Canis_lupus_dingo
ENSGACG00000011474	snrnp200	99	89.631	ENSCHIG00000020611	SNRNP200	100	89.724	Capra_hircus
ENSGACG00000011474	snrnp200	99	89.958	ENSTSYG00000010467	SNRNP200	100	90.051	Carlito_syrichta
ENSGACG00000011474	snrnp200	99	89.447	ENSCAPG00000017234	SNRNP200	99	89.540	Cavia_aperea
ENSGACG00000011474	snrnp200	99	89.771	ENSCPOG00000006776	SNRNP200	100	89.865	Cavia_porcellus
ENSGACG00000011474	snrnp200	99	89.865	ENSCCAG00000033962	SNRNP200	100	89.958	Cebus_capucinus
ENSGACG00000011474	snrnp200	99	89.911	ENSCATG00000015790	SNRNP200	100	90.005	Cercocebus_atys
ENSGACG00000011474	snrnp200	99	89.818	ENSCLAG00000004116	SNRNP200	100	89.911	Chinchilla_lanigera
ENSGACG00000011474	snrnp200	99	89.911	ENSCSAG00000017369	SNRNP200	100	90.005	Chlorocebus_sabaeus
ENSGACG00000011474	snrnp200	73	91.235	ENSCHOG00000012981	-	58	91.235	Choloepus_hoffmanni
ENSGACG00000011474	snrnp200	99	89.879	ENSCPBG00000022571	SNRNP200	100	89.972	Chrysemys_picta_bellii
ENSGACG00000011474	snrnp200	99	75.349	ENSCING00000005082	-	99	75.303	Ciona_intestinalis
ENSGACG00000011474	snrnp200	94	89.960	ENSCANG00000033932	SNRNP200	100	89.960	Colobus_angolensis_palliatus
ENSGACG00000011474	snrnp200	99	89.911	ENSCGRG00001022610	Snrnp200	100	90.005	Cricetulus_griseus_chok1gshd
ENSGACG00000011474	snrnp200	99	89.412	ENSCGRG00000016472	Snrnp200	100	89.506	Cricetulus_griseus_crigri
ENSGACG00000011474	snrnp200	99	95.418	ENSCSEG00000016399	snrnp200	100	95.372	Cynoglossus_semilaevis
ENSGACG00000011474	snrnp200	99	91.453	ENSCVAG00000017631	snrnp200	100	91.453	Cyprinodon_variegatus
ENSGACG00000011474	snrnp200	99	93.835	ENSDARG00000077536	snrnp200	100	93.788	Danio_rerio
ENSGACG00000011474	snrnp200	99	88.557	ENSDNOG00000011227	SNRNP200	100	88.650	Dasypus_novemcinctus
ENSGACG00000011474	snrnp200	99	87.459	ENSDORG00000005861	Snrnp200	100	87.552	Dipodomys_ordii
ENSGACG00000011474	snrnp200	99	73.572	FBgn0263599	l(3)72Ab	100	73.525	Drosophila_melanogaster
ENSGACG00000011474	snrnp200	95	89.175	ENSETEG00000000162	SNRNP200	74	89.347	Echinops_telfairi
ENSGACG00000011474	snrnp200	83	80.931	ENSEBUG00000016524	snrnp200	95	80.931	Eptatretus_burgeri
ENSGACG00000011474	snrnp200	99	89.163	ENSEASG00005001884	SNRNP200	100	88.977	Equus_asinus_asinus
ENSGACG00000011474	snrnp200	99	89.958	ENSECAG00000019675	SNRNP200	100	90.051	Equus_caballus
ENSGACG00000011474	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSGACG00000011474	snrnp200	99	95.921	ENSELUG00000018948	snrnp200	100	95.845	Esox_lucius
ENSGACG00000011474	snrnp200	99	90.005	ENSFCAG00000010699	SNRNP200	100	90.098	Felis_catus
ENSGACG00000011474	snrnp200	93	84.611	ENSFALG00000001368	-	95	84.611	Ficedula_albicollis
ENSGACG00000011474	snrnp200	99	89.678	ENSFDAG00000004683	SNRNP200	100	89.771	Fukomys_damarensis
ENSGACG00000011474	snrnp200	99	93.788	ENSFHEG00000003786	snrnp200	100	93.788	Fundulus_heteroclitus
ENSGACG00000011474	snrnp200	99	95.425	ENSGMOG00000004881	snrnp200	100	95.238	Gadus_morhua
ENSGACG00000011474	snrnp200	99	93.975	ENSGAFG00000010807	snrnp200	100	93.975	Gambusia_affinis
ENSGACG00000011474	snrnp200	95	91.600	ENSGAGG00000016069	SNRNP200	99	90.246	Gopherus_agassizii
ENSGACG00000011474	snrnp200	99	89.911	ENSGGOG00000005174	SNRNP200	100	90.005	Gorilla_gorilla
ENSGACG00000011474	snrnp200	97	94.293	ENSHBUG00000011322	snrnp200	99	94.293	Haplochromis_burtoni
ENSGACG00000011474	snrnp200	99	89.771	ENSHGLG00000006654	SNRNP200	100	89.865	Heterocephalus_glaber_female
ENSGACG00000011474	snrnp200	99	89.771	ENSHGLG00100018594	SNRNP200	100	89.865	Heterocephalus_glaber_male
ENSGACG00000011474	snrnp200	99	89.958	ENSSTOG00000016351	SNRNP200	100	90.051	Ictidomys_tridecemlineatus
ENSGACG00000011474	snrnp200	99	89.771	ENSJJAG00000023659	Snrnp200	100	89.865	Jaculus_jaculus
ENSGACG00000011474	snrnp200	99	93.762	ENSKMAG00000003665	snrnp200	100	93.762	Kryptolebias_marmoratus
ENSGACG00000011474	snrnp200	99	97.945	ENSLBEG00000021585	snrnp200	100	97.945	Labrus_bergylta
ENSGACG00000011474	snrnp200	81	91.648	ENSLACG00000000226	SNRNP200	100	91.648	Latimeria_chalumnae
ENSGACG00000011474	snrnp200	99	93.934	ENSLOCG00000015198	snrnp200	100	93.887	Lepisosteus_oculatus
ENSGACG00000011474	snrnp200	99	89.818	ENSLAFG00000015626	SNRNP200	100	89.911	Loxodonta_africana
ENSGACG00000011474	snrnp200	99	89.865	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSGACG00000011474	snrnp200	99	89.865	ENSMMUG00000023261	SNRNP200	100	89.958	Macaca_mulatta
ENSGACG00000011474	snrnp200	99	89.818	ENSMNEG00000032398	SNRNP200	100	89.911	Macaca_nemestrina
ENSGACG00000011474	snrnp200	99	89.911	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSGACG00000011474	snrnp200	99	96.592	ENSMAMG00000007851	snrnp200	100	96.592	Mastacembelus_armatus
ENSGACG00000011474	snrnp200	97	94.293	ENSMZEG00005010787	snrnp200	99	94.293	Maylandia_zebra
ENSGACG00000011474	snrnp200	96	90.048	ENSMGAG00000001831	SNRNP200	99	90.019	Meleagris_gallopavo
ENSGACG00000011474	snrnp200	99	89.958	ENSMAUG00000011825	Snrnp200	100	90.051	Mesocricetus_auratus
ENSGACG00000011474	snrnp200	99	89.958	ENSMICG00000004710	SNRNP200	100	90.051	Microcebus_murinus
ENSGACG00000011474	snrnp200	99	88.090	ENSMOCG00000011814	Snrnp200	100	88.183	Microtus_ochrogaster
ENSGACG00000011474	snrnp200	99	95.122	ENSMMOG00000014167	snrnp200	100	95.189	Mola_mola
ENSGACG00000011474	snrnp200	99	89.911	ENSMODG00000008475	SNRNP200	100	90.005	Monodelphis_domestica
ENSGACG00000011474	snrnp200	99	97.151	ENSMALG00000001973	snrnp200	100	97.151	Monopterus_albus
ENSGACG00000011474	snrnp200	99	89.818	MGP_CAROLIEiJ_G0024250	Snrnp200	100	89.911	Mus_caroli
ENSGACG00000011474	snrnp200	99	89.865	ENSMUSG00000003660	Snrnp200	100	89.958	Mus_musculus
ENSGACG00000011474	snrnp200	99	89.865	MGP_PahariEiJ_G0025695	Snrnp200	100	89.958	Mus_pahari
ENSGACG00000011474	snrnp200	99	89.865	MGP_SPRETEiJ_G0025170	Snrnp200	100	90.659	Mus_spretus
ENSGACG00000011474	snrnp200	99	90.005	ENSMPUG00000008949	SNRNP200	100	90.098	Mustela_putorius_furo
ENSGACG00000011474	snrnp200	99	89.506	ENSMLUG00000010493	SNRNP200	100	89.599	Myotis_lucifugus
ENSGACG00000011474	snrnp200	99	86.595	ENSMLUG00000027511	-	100	86.688	Myotis_lucifugus
ENSGACG00000011474	snrnp200	99	89.911	ENSNGAG00000021993	Snrnp200	100	90.005	Nannospalax_galili
ENSGACG00000011474	snrnp200	90	96.984	ENSNBRG00000017960	snrnp200	98	96.984	Neolamprologus_brichardi
ENSGACG00000011474	snrnp200	99	85.668	ENSNLEG00000000025	SNRNP200	100	85.807	Nomascus_leucogenys
ENSGACG00000011474	snrnp200	99	90.909	ENSMEUG00000010532	SNRNP200	79	88.830	Notamacropus_eugenii
ENSGACG00000011474	snrnp200	96	89.072	ENSOPRG00000015464	SNRNP200	96	89.099	Ochotona_princeps
ENSGACG00000011474	snrnp200	99	89.771	ENSODEG00000008366	SNRNP200	100	89.865	Octodon_degus
ENSGACG00000011474	snrnp200	99	96.684	ENSONIG00000010714	snrnp200	100	96.684	Oreochromis_niloticus
ENSGACG00000011474	snrnp200	99	89.865	ENSOCUG00000009864	SNRNP200	100	89.958	Oryctolagus_cuniculus
ENSGACG00000011474	snrnp200	99	95.512	ENSORLG00000012286	snrnp200	100	95.813	Oryzias_latipes
ENSGACG00000011474	snrnp200	99	95.652	ENSORLG00020004648	snrnp200	100	95.652	Oryzias_latipes_hni
ENSGACG00000011474	snrnp200	99	95.605	ENSORLG00015019114	snrnp200	100	95.840	Oryzias_latipes_hsok
ENSGACG00000011474	snrnp200	99	95.919	ENSOMEG00000011834	snrnp200	100	95.890	Oryzias_melastigma
ENSGACG00000011474	snrnp200	99	89.958	ENSOGAG00000006879	SNRNP200	100	90.051	Otolemur_garnettii
ENSGACG00000011474	snrnp200	99	88.936	ENSOARG00000013949	SNRNP200	100	89.029	Ovis_aries
ENSGACG00000011474	snrnp200	99	89.911	ENSPPAG00000041559	SNRNP200	100	90.005	Pan_paniscus
ENSGACG00000011474	snrnp200	99	90.005	ENSPPRG00000004435	SNRNP200	100	90.098	Panthera_pardus
ENSGACG00000011474	snrnp200	99	89.584	ENSPTIG00000006380	SNRNP200	100	89.678	Panthera_tigris_altaica
ENSGACG00000011474	snrnp200	99	89.911	ENSPTRG00000012230	SNRNP200	100	90.005	Pan_troglodytes
ENSGACG00000011474	snrnp200	99	89.865	ENSPANG00000006017	SNRNP200	100	89.958	Papio_anubis
ENSGACG00000011474	snrnp200	99	94.725	ENSPKIG00000014762	snrnp200	100	94.993	Paramormyrops_kingsleyae
ENSGACG00000011474	snrnp200	99	88.982	ENSPSIG00000008580	SNRNP200	100	89.076	Pelodiscus_sinensis
ENSGACG00000011474	snrnp200	99	89.865	ENSPCIG00000023050	SNRNP200	100	89.958	Phascolarctos_cinereus
ENSGACG00000011474	snrnp200	99	96.405	ENSPFOG00000015110	snrnp200	100	96.405	Poecilia_formosa
ENSGACG00000011474	snrnp200	97	96.925	ENSPLAG00000006711	snrnp200	99	96.925	Poecilia_latipinna
ENSGACG00000011474	snrnp200	97	96.760	ENSPMEG00000021166	snrnp200	99	96.760	Poecilia_mexicana
ENSGACG00000011474	snrnp200	99	96.404	ENSPREG00000008875	snrnp200	100	96.404	Poecilia_reticulata
ENSGACG00000011474	snrnp200	99	89.911	ENSPPYG00000012068	SNRNP200	100	90.005	Pongo_abelii
ENSGACG00000011474	snrnp200	94	94.872	ENSPCAG00000008536	SNRNP200	86	94.872	Procavia_capensis
ENSGACG00000011474	snrnp200	99	89.911	ENSPCOG00000024608	SNRNP200	100	90.005	Propithecus_coquereli
ENSGACG00000011474	snrnp200	95	90.194	ENSPVAG00000005860	SNRNP200	92	90.194	Pteropus_vampyrus
ENSGACG00000011474	snrnp200	99	92.035	ENSPNYG00000017476	snrnp200	100	92.035	Pundamilia_nyererei
ENSGACG00000011474	snrnp200	99	89.823	ENSPNAG00000010998	snrnp200	100	89.776	Pygocentrus_nattereri
ENSGACG00000011474	snrnp200	99	89.958	ENSRNOG00000012157	Snrnp200	100	90.051	Rattus_norvegicus
ENSGACG00000011474	snrnp200	99	89.911	ENSRBIG00000044690	-	100	90.005	Rhinopithecus_bieti
ENSGACG00000011474	snrnp200	99	89.911	ENSRROG00000037952	-	100	90.005	Rhinopithecus_roxellana
ENSGACG00000011474	snrnp200	99	89.865	ENSSBOG00000035471	SNRNP200	100	89.958	Saimiri_boliviensis_boliviensis
ENSGACG00000011474	snrnp200	96	90.097	ENSSHAG00000000758	SNRNP200	99	90.068	Sarcophilus_harrisii
ENSGACG00000011474	snrnp200	99	94.890	ENSSFOG00015018826	snrnp200	100	94.818	Scleropages_formosus
ENSGACG00000011474	snrnp200	99	97.758	ENSSMAG00000005463	snrnp200	100	97.758	Scophthalmus_maximus
ENSGACG00000011474	snrnp200	99	97.758	ENSSDUG00000021410	snrnp200	100	97.758	Seriola_dumerili
ENSGACG00000011474	snrnp200	99	97.711	ENSSLDG00000010884	snrnp200	100	97.711	Seriola_lalandi_dorsalis
ENSGACG00000011474	snrnp200	95	87.430	ENSSARG00000010728	SNRNP200	96	87.430	Sorex_araneus
ENSGACG00000011474	snrnp200	99	90.145	ENSSPUG00000003726	-	100	90.191	Sphenodon_punctatus
ENSGACG00000011474	snrnp200	99	97.992	ENSSPAG00000001842	snrnp200	100	97.992	Stegastes_partitus
ENSGACG00000011474	snrnp200	99	90.005	ENSSSCG00000008127	SNRNP200	100	90.098	Sus_scrofa
ENSGACG00000011474	snrnp200	98	82.058	ENSTGUG00000014475	-	100	81.996	Taeniopygia_guttata
ENSGACG00000011474	snrnp200	99	96.123	ENSTRUG00000001307	snrnp200	100	96.123	Takifugu_rubripes
ENSGACG00000011474	snrnp200	99	89.803	ENSTNIG00000004320	snrnp200	100	83.955	Tetraodon_nigroviridis
ENSGACG00000011474	snrnp200	82	92.488	ENSTBEG00000003329	-	67	92.488	Tupaia_belangeri
ENSGACG00000011474	snrnp200	99	89.771	ENSTTRG00000004983	SNRNP200	100	89.865	Tursiops_truncatus
ENSGACG00000011474	snrnp200	75	82.705	ENSUAMG00000008395	-	95	83.092	Ursus_americanus
ENSGACG00000011474	snrnp200	99	90.005	ENSUMAG00000012385	SNRNP200	100	90.098	Ursus_maritimus
ENSGACG00000011474	snrnp200	87	93.582	ENSVPAG00000006434	SNRNP200	66	93.582	Vicugna_pacos
ENSGACG00000011474	snrnp200	99	89.795	ENSVVUG00000026247	SNRNP200	100	89.888	Vulpes_vulpes
ENSGACG00000011474	snrnp200	99	89.781	ENSXETG00000001243	snrnp200	100	89.874	Xenopus_tropicalis
ENSGACG00000011474	snrnp200	97	96.843	ENSXMAG00000002058	snrnp200	98	96.843	Xiphophorus_maculatus