EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011700 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 11541 bases
Position: chrgroupXI:10704689-10716229
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015474	Ribonuc_2-5A	PF06479.12	1.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015505	-	2871	-	ENSGACP00000015474	957 (aa)	-	G3PD00

Gene Model

Click here to download ENSGACG00000011700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011700	ern1	97	53.975	ENSGACG00000016726	ern2	93	54.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011700	ern1	99	90.272	ENSAPOG00000009999	ern1	88	90.272	Acanthochromis_polyacanthus
ENSGACG00000011700	ern1	98	90.996	ENSACIG00000021716	ern1	87	90.996	Amphilophus_citrinellus
ENSGACG00000011700	ern1	99	91.118	ENSAOCG00000012309	ern1	88	91.118	Amphiprion_ocellaris
ENSGACG00000011700	ern1	99	90.690	ENSAPEG00000011263	ern1	98	91.983	Amphiprion_percula
ENSGACG00000011700	ern1	98	91.923	ENSATEG00000024468	ern1	86	91.923	Anabas_testudineus
ENSGACG00000011700	ern1	99	90.690	ENSACLG00000027919	ern1	87	91.915	Astatotilapia_calliptera
ENSGACG00000011700	ern1	97	84.076	ENSAMXG00000000944	ern1	90	84.076	Astyanax_mexicanus
ENSGACG00000011700	ern1	98	90.138	ENSCSEG00000014500	ern1	91	90.426	Cynoglossus_semilaevis
ENSGACG00000011700	ern1	97	89.637	ENSCVAG00000002988	ern1	90	89.637	Cyprinodon_variegatus
ENSGACG00000011700	ern1	97	82.309	ENSDARG00000013997	ern1	97	82.291	Danio_rerio
ENSGACG00000011700	ern1	98	83.021	ENSELUG00000005957	ern1	92	83.438	Esox_lucius
ENSGACG00000011700	ern1	98	88.912	ENSFHEG00000005578	ern1	89	89.362	Fundulus_heteroclitus
ENSGACG00000011700	ern1	97	87.259	ENSGMOG00000011232	ern1	100	87.259	Gadus_morhua
ENSGACG00000011700	ern1	97	89.681	ENSGAFG00000020231	ern1	93	87.273	Gambusia_affinis
ENSGACG00000011700	ern1	97	92.021	ENSHBUG00000012581	ern1	88	91.347	Haplochromis_burtoni
ENSGACG00000011700	ern1	97	89.626	ENSHCOG00000016199	ern1	90	89.626	Hippocampus_comes
ENSGACG00000011700	ern1	97	84.216	ENSIPUG00000011083	ern1	90	84.216	Ictalurus_punctatus
ENSGACG00000011700	ern1	99	87.841	ENSKMAG00000019499	ern1	88	87.841	Kryptolebias_marmoratus
ENSGACG00000011700	ern1	97	88.123	ENSLBEG00000025907	ern1	88	88.123	Labrus_bergylta
ENSGACG00000011700	ern1	98	91.932	ENSMAMG00000023439	ern1	88	92.128	Mastacembelus_armatus
ENSGACG00000011700	ern1	98	91.817	ENSMZEG00005003221	ern1	87	91.817	Maylandia_zebra
ENSGACG00000011700	ern1	97	90.319	ENSMMOG00000007650	ern1	93	90.319	Mola_mola
ENSGACG00000011700	ern1	98	90.360	ENSMALG00000017775	ern1	86	90.360	Monopterus_albus
ENSGACG00000011700	ern1	97	91.702	ENSNBRG00000002179	ern1	88	91.702	Neolamprologus_brichardi
ENSGACG00000011700	ern1	97	90.745	ENSONIG00000017169	ern1	97	90.745	Oreochromis_niloticus
ENSGACG00000011700	ern1	99	87.879	ENSORLG00000008940	ern1	89	87.879	Oryzias_latipes
ENSGACG00000011700	ern1	99	87.578	ENSORLG00020018387	ern1	88	87.578	Oryzias_latipes_hni
ENSGACG00000011700	ern1	99	87.474	ENSORLG00015007946	ern1	88	87.474	Oryzias_latipes_hsok
ENSGACG00000011700	ern1	99	87.630	ENSOMEG00000011741	ern1	89	87.630	Oryzias_melastigma
ENSGACG00000011700	ern1	97	83.280	ENSPKIG00000005593	ern1	95	83.280	Paramormyrops_kingsleyae
ENSGACG00000011700	ern1	98	90.021	ENSPMGG00000020442	ern1	91	89.989	Periophthalmus_magnuspinnatus
ENSGACG00000011700	ern1	97	90.278	ENSPFOG00000007378	ern1	88	90.278	Poecilia_formosa
ENSGACG00000011700	ern1	97	90.278	ENSPLAG00000014780	ern1	89	90.278	Poecilia_latipinna
ENSGACG00000011700	ern1	97	90.491	ENSPMEG00000016324	ern1	90	89.227	Poecilia_mexicana
ENSGACG00000011700	ern1	97	89.850	ENSPREG00000006286	ern1	88	89.850	Poecilia_reticulata
ENSGACG00000011700	ern1	99	90.795	ENSPNYG00000017929	ern1	92	90.795	Pundamilia_nyererei
ENSGACG00000011700	ern1	97	84.739	ENSPNAG00000029447	ern1	91	84.144	Pygocentrus_nattereri
ENSGACG00000011700	ern1	98	90.996	ENSSMAG00000015042	ern1	86	90.996	Scophthalmus_maximus
ENSGACG00000011700	ern1	98	93.114	ENSSDUG00000009098	ern1	86	93.114	Seriola_dumerili
ENSGACG00000011700	ern1	98	92.903	ENSSLDG00000023254	ern1	86	92.903	Seriola_lalandi_dorsalis
ENSGACG00000011700	ern1	99	91.149	ENSSPAG00000017539	ern1	89	91.149	Stegastes_partitus
ENSGACG00000011700	ern1	96	90.043	ENSTRUG00000001041	ern1	89	90.476	Takifugu_rubripes
ENSGACG00000011700	ern1	97	89.989	ENSTNIG00000017990	ern1	98	90.042	Tetraodon_nigroviridis
ENSGACG00000011700	ern1	97	90.385	ENSXCOG00000010330	ern1	93	90.385	Xiphophorus_couchianus
ENSGACG00000011700	ern1	97	90.171	ENSXMAG00000001310	ern1	88	90.171	Xiphophorus_maculatus