EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011703 (Gene tree)
Gene ID: -
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 12023 bases
Position: chrgroupI:13853852-13865874
Accession: ZDB-GENE-030131-5181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015492	Npa1	PF11707.8	3.4e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015523	-	6726	-	ENSGACP00000015492	2242 (aa)	-	G3PD18

Gene Model

Click here to download ENSGACG00000011703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011703	urb1	99	44.327	ENSG00000142207	URB1	99	44.221	Homo_sapiens
ENSGACG00000011703	urb1	97	75.336	ENSAPOG00000020308	urb1	99	75.494	Acanthochromis_polyacanthus
ENSGACG00000011703	urb1	99	45.158	ENSAMEG00000011998	URB1	98	45.319	Ailuropoda_melanoleuca
ENSGACG00000011703	urb1	96	67.902	ENSACIG00000003248	urb1	97	67.670	Amphilophus_citrinellus
ENSGACG00000011703	urb1	99	67.272	ENSAOCG00000010364	urb1	99	67.360	Amphiprion_ocellaris
ENSGACG00000011703	urb1	97	77.717	ENSAPEG00000010758	urb1	99	77.717	Amphiprion_percula
ENSGACG00000011703	urb1	99	74.650	ENSATEG00000011790	urb1	99	74.650	Anabas_testudineus
ENSGACG00000011703	urb1	97	46.316	ENSAPLG00000012791	URB1	99	46.496	Anas_platyrhynchos
ENSGACG00000011703	urb1	99	45.246	ENSACAG00000002817	URB1	98	45.263	Anolis_carolinensis
ENSGACG00000011703	urb1	99	44.673	ENSANAG00000024617	URB1	99	44.673	Aotus_nancymaae
ENSGACG00000011703	urb1	99	73.164	ENSACLG00000024865	urb1	99	73.253	Astatotilapia_calliptera
ENSGACG00000011703	urb1	99	49.510	ENSAMXG00000012306	urb1	99	49.422	Astyanax_mexicanus
ENSGACG00000011703	urb1	99	44.493	ENSBTAG00000012412	URB1	99	44.581	Bos_taurus
ENSGACG00000011703	urb1	99	44.240	ENSCJAG00000009118	URB1	99	44.240	Callithrix_jacchus
ENSGACG00000011703	urb1	99	44.571	ENSCAFG00000008892	URB1	99	44.571	Canis_familiaris
ENSGACG00000011703	urb1	99	44.357	ENSCAFG00020025987	-	98	44.401	Canis_lupus_dingo
ENSGACG00000011703	urb1	99	43.890	ENSCAFG00020025994	-	99	43.933	Canis_lupus_dingo
ENSGACG00000011703	urb1	99	44.649	ENSCHIG00000015645	URB1	99	44.649	Capra_hircus
ENSGACG00000011703	urb1	99	44.347	ENSTSYG00000013286	URB1	99	44.347	Carlito_syrichta
ENSGACG00000011703	urb1	99	43.631	ENSCAPG00000015589	URB1	99	43.631	Cavia_aperea
ENSGACG00000011703	urb1	99	44.430	ENSCPOG00000006748	URB1	99	44.474	Cavia_porcellus
ENSGACG00000011703	urb1	99	44.367	ENSCCAG00000021299	URB1	99	44.367	Cebus_capucinus
ENSGACG00000011703	urb1	99	44.673	ENSCATG00000042630	URB1	99	44.728	Cercocebus_atys
ENSGACG00000011703	urb1	99	44.989	ENSCLAG00000005262	URB1	98	44.989	Chinchilla_lanigera
ENSGACG00000011703	urb1	99	43.941	ENSCSAG00000009584	URB1	99	43.993	Chlorocebus_sabaeus
ENSGACG00000011703	urb1	99	47.954	ENSCPBG00000006454	URB1	99	47.868	Chrysemys_picta_bellii
ENSGACG00000011703	urb1	99	44.649	ENSCANG00000031088	URB1	99	44.684	Colobus_angolensis_palliatus
ENSGACG00000011703	urb1	99	44.000	ENSCGRG00001010616	Urb1	99	44.025	Cricetulus_griseus_chok1gshd
ENSGACG00000011703	urb1	99	44.030	ENSCGRG00000015840	Urb1	99	44.030	Cricetulus_griseus_crigri
ENSGACG00000011703	urb1	99	66.064	ENSCSEG00000012616	urb1	99	66.064	Cynoglossus_semilaevis
ENSGACG00000011703	urb1	93	69.130	ENSCVAG00000009076	urb1	97	70.294	Cyprinodon_variegatus
ENSGACG00000011703	urb1	99	54.880	ENSDARG00000060308	urb1	99	54.925	Danio_rerio
ENSGACG00000011703	urb1	85	48.287	ENSDNOG00000015586	URB1	98	48.287	Dasypus_novemcinctus
ENSGACG00000011703	urb1	99	44.278	ENSDORG00000006735	Urb1	99	44.205	Dipodomys_ordii
ENSGACG00000011703	urb1	92	52.874	ENSETEG00000009080	URB1	91	52.874	Echinops_telfairi
ENSGACG00000011703	urb1	99	44.484	ENSEASG00005007711	URB1	99	44.961	Equus_asinus_asinus
ENSGACG00000011703	urb1	91	55.958	ENSECAG00000013206	URB1	98	55.958	Equus_caballus
ENSGACG00000011703	urb1	99	57.105	ENSELUG00000020516	urb1	98	57.490	Esox_lucius
ENSGACG00000011703	urb1	99	44.552	ENSFCAG00000002177	URB1	99	44.640	Felis_catus
ENSGACG00000011703	urb1	99	43.329	ENSFALG00000004636	URB1	99	43.278	Ficedula_albicollis
ENSGACG00000011703	urb1	99	44.562	ENSFDAG00000007288	URB1	94	44.508	Fukomys_damarensis
ENSGACG00000011703	urb1	99	63.078	ENSFHEG00000000202	urb1	99	65.925	Fundulus_heteroclitus
ENSGACG00000011703	urb1	94	60.686	ENSGMOG00000001838	urb1	94	60.686	Gadus_morhua
ENSGACG00000011703	urb1	99	46.749	ENSGALG00000015887	URB1	99	46.749	Gallus_gallus
ENSGACG00000011703	urb1	95	70.109	ENSGAFG00000020694	urb1	98	70.109	Gambusia_affinis
ENSGACG00000011703	urb1	99	47.477	ENSGAGG00000022544	URB1	99	47.454	Gopherus_agassizii
ENSGACG00000011703	urb1	99	44.474	ENSGGOG00000000285	URB1	99	44.474	Gorilla_gorilla
ENSGACG00000011703	urb1	99	73.031	ENSHBUG00000001904	urb1	99	73.120	Haplochromis_burtoni
ENSGACG00000011703	urb1	99	43.296	ENSHGLG00000004907	URB1	99	43.296	Heterocephalus_glaber_female
ENSGACG00000011703	urb1	99	43.558	ENSHGLG00100010749	URB1	99	43.558	Heterocephalus_glaber_male
ENSGACG00000011703	urb1	73	65.571	ENSHCOG00000018683	urb1	97	67.118	Hippocampus_comes
ENSGACG00000011703	urb1	99	48.855	ENSIPUG00000014721	urb1	99	48.944	Ictalurus_punctatus
ENSGACG00000011703	urb1	99	44.773	ENSSTOG00000004539	URB1	98	44.773	Ictidomys_tridecemlineatus
ENSGACG00000011703	urb1	92	74.913	ENSKMAG00000006001	urb1	97	74.826	Kryptolebias_marmoratus
ENSGACG00000011703	urb1	95	76.656	ENSLBEG00000027208	urb1	99	76.656	Labrus_bergylta
ENSGACG00000011703	urb1	99	44.701	ENSLACG00000017059	URB1	99	44.769	Latimeria_chalumnae
ENSGACG00000011703	urb1	99	53.897	ENSLOCG00000009190	urb1	99	53.897	Lepisosteus_oculatus
ENSGACG00000011703	urb1	99	45.117	ENSLAFG00000010407	URB1	98	45.117	Loxodonta_africana
ENSGACG00000011703	urb1	99	44.254	ENSMFAG00000034391	URB1	95	44.308	Macaca_fascicularis
ENSGACG00000011703	urb1	99	44.254	ENSMMUG00000010295	URB1	99	44.308	Macaca_mulatta
ENSGACG00000011703	urb1	99	43.624	ENSMNEG00000032981	URB1	99	43.640	Macaca_nemestrina
ENSGACG00000011703	urb1	99	44.561	ENSMLEG00000041435	URB1	99	44.615	Mandrillus_leucophaeus
ENSGACG00000011703	urb1	99	70.807	ENSMAMG00000011238	urb1	99	70.807	Mastacembelus_armatus
ENSGACG00000011703	urb1	99	70.788	ENSMZEG00005011862	urb1	99	70.887	Maylandia_zebra
ENSGACG00000011703	urb1	99	46.344	ENSMGAG00000014512	URB1	99	46.625	Meleagris_gallopavo
ENSGACG00000011703	urb1	92	51.208	ENSMAUG00000010516	Urb1	99	51.208	Mesocricetus_auratus
ENSGACG00000011703	urb1	99	44.464	ENSMICG00000016424	URB1	99	44.376	Microcebus_murinus
ENSGACG00000011703	urb1	99	43.594	ENSMOCG00000012613	Urb1	99	43.594	Microtus_ochrogaster
ENSGACG00000011703	urb1	99	44.577	ENSMODG00000021076	URB1	99	44.577	Monodelphis_domestica
ENSGACG00000011703	urb1	99	70.382	ENSMALG00000017411	urb1	99	70.249	Monopterus_albus
ENSGACG00000011703	urb1	99	43.612	MGP_CAROLIEiJ_G0020948	Urb1	98	43.612	Mus_caroli
ENSGACG00000011703	urb1	99	43.522	ENSMUSG00000039929	Urb1	98	43.522	Mus_musculus
ENSGACG00000011703	urb1	99	43.627	MGP_PahariEiJ_G0016653	Urb1	98	43.627	Mus_pahari
ENSGACG00000011703	urb1	99	43.673	MGP_SPRETEiJ_G0021854	Urb1	98	43.673	Mus_spretus
ENSGACG00000011703	urb1	99	45.262	ENSMPUG00000001123	URB1	98	45.439	Mustela_putorius_furo
ENSGACG00000011703	urb1	99	43.791	ENSNGAG00000001905	Urb1	99	43.791	Nannospalax_galili
ENSGACG00000011703	urb1	82	68.636	ENSNBRG00000001049	urb1	99	68.636	Neolamprologus_brichardi
ENSGACG00000011703	urb1	99	43.122	ENSNLEG00000026872	URB1	99	42.976	Nomascus_leucogenys
ENSGACG00000011703	urb1	92	48.485	ENSMEUG00000010828	URB1	94	42.051	Notamacropus_eugenii
ENSGACG00000011703	urb1	99	42.952	ENSOPRG00000013482	URB1	99	43.084	Ochotona_princeps
ENSGACG00000011703	urb1	99	43.612	ENSODEG00000002587	URB1	99	43.662	Octodon_degus
ENSGACG00000011703	urb1	99	73.621	ENSONIG00000005599	urb1	99	73.621	Oreochromis_niloticus
ENSGACG00000011703	urb1	99	44.954	ENSOCUG00000009381	URB1	98	44.998	Oryctolagus_cuniculus
ENSGACG00000011703	urb1	99	67.794	ENSORLG00000003429	urb1	99	67.794	Oryzias_latipes
ENSGACG00000011703	urb1	99	67.289	ENSORLG00020013785	urb1	99	67.289	Oryzias_latipes_hni
ENSGACG00000011703	urb1	93	74.451	ENSORLG00015019421	urb1	99	74.451	Oryzias_latipes_hsok
ENSGACG00000011703	urb1	81	78.788	ENSOMEG00000002094	urb1	99	78.788	Oryzias_melastigma
ENSGACG00000011703	urb1	99	44.785	ENSOGAG00000017140	URB1	99	44.829	Otolemur_garnettii
ENSGACG00000011703	urb1	97	47.830	ENSOARG00000013679	URB1	98	47.830	Ovis_aries
ENSGACG00000011703	urb1	99	44.337	ENSPPAG00000003423	URB1	99	44.337	Pan_paniscus
ENSGACG00000011703	urb1	99	44.615	ENSPPRG00000023131	URB1	99	44.747	Panthera_pardus
ENSGACG00000011703	urb1	88	45.787	ENSPTIG00000016125	URB1	93	45.938	Panthera_tigris_altaica
ENSGACG00000011703	urb1	99	44.249	ENSPTRG00000013852	URB1	99	44.249	Pan_troglodytes
ENSGACG00000011703	urb1	99	44.538	ENSPANG00000021964	URB1	99	44.571	Papio_anubis
ENSGACG00000011703	urb1	99	53.904	ENSPKIG00000003683	urb1	97	54.041	Paramormyrops_kingsleyae
ENSGACG00000011703	urb1	99	43.879	ENSPEMG00000021205	Urb1	97	44.011	Peromyscus_maniculatus_bairdii
ENSGACG00000011703	urb1	71	34.494	ENSPMAG00000009733	URB1	99	32.677	Petromyzon_marinus
ENSGACG00000011703	urb1	99	43.891	ENSPCIG00000016350	URB1	99	44.183	Phascolarctos_cinereus
ENSGACG00000011703	urb1	98	67.198	ENSPLAG00000004371	urb1	99	67.062	Poecilia_latipinna
ENSGACG00000011703	urb1	99	67.646	ENSPMEG00000006634	urb1	99	67.646	Poecilia_mexicana
ENSGACG00000011703	urb1	99	67.096	ENSPREG00000013453	urb1	99	67.052	Poecilia_reticulata
ENSGACG00000011703	urb1	99	44.268	ENSPPYG00000011359	URB1	99	44.162	Pongo_abelii
ENSGACG00000011703	urb1	99	40.193	ENSPCAG00000007430	URB1	98	40.193	Procavia_capensis
ENSGACG00000011703	urb1	99	44.615	ENSPCOG00000022695	URB1	99	44.664	Propithecus_coquereli
ENSGACG00000011703	urb1	99	44.405	ENSPVAG00000000889	URB1	99	44.405	Pteropus_vampyrus
ENSGACG00000011703	urb1	99	69.097	ENSPNYG00000010589	urb1	99	69.186	Pundamilia_nyererei
ENSGACG00000011703	urb1	99	50.553	ENSPNAG00000019324	urb1	99	50.642	Pygocentrus_nattereri
ENSGACG00000011703	urb1	99	43.395	ENSRNOG00000002080	Urb1	98	43.419	Rattus_norvegicus
ENSGACG00000011703	urb1	99	44.606	ENSRBIG00000033122	URB1	99	44.606	Rhinopithecus_bieti
ENSGACG00000011703	urb1	99	44.537	ENSRROG00000040237	URB1	99	44.537	Rhinopithecus_roxellana
ENSGACG00000011703	urb1	99	44.376	ENSSBOG00000027672	URB1	99	44.357	Saimiri_boliviensis_boliviensis
ENSGACG00000011703	urb1	99	44.717	ENSSHAG00000005140	URB1	99	44.717	Sarcophilus_harrisii
ENSGACG00000011703	urb1	92	57.122	ENSSFOG00015000339	urb1	98	57.122	Scleropages_formosus
ENSGACG00000011703	urb1	99	74.956	ENSSMAG00000003782	urb1	99	75.399	Scophthalmus_maximus
ENSGACG00000011703	urb1	99	79.582	ENSSDUG00000012313	urb1	99	79.582	Seriola_dumerili
ENSGACG00000011703	urb1	99	79.004	ENSSLDG00000023179	urb1	99	79.004	Seriola_lalandi_dorsalis
ENSGACG00000011703	urb1	99	46.127	ENSSPUG00000012447	URB1	98	46.127	Sphenodon_punctatus
ENSGACG00000011703	urb1	99	75.477	ENSSPAG00000006325	urb1	99	75.477	Stegastes_partitus
ENSGACG00000011703	urb1	99	44.171	ENSSSCG00000032024	URB1	99	44.327	Sus_scrofa
ENSGACG00000011703	urb1	74	47.757	ENSTGUG00000013442	URB1	100	47.741	Taeniopygia_guttata
ENSGACG00000011703	urb1	99	69.728	ENSTRUG00000009372	urb1	99	69.728	Takifugu_rubripes
ENSGACG00000011703	urb1	99	67.289	ENSTNIG00000016277	urb1	99	67.289	Tetraodon_nigroviridis
ENSGACG00000011703	urb1	77	50.286	ENSTBEG00000010044	URB1	76	50.286	Tupaia_belangeri
ENSGACG00000011703	urb1	91	49.229	ENSTTRG00000007712	URB1	91	49.538	Tursiops_truncatus
ENSGACG00000011703	urb1	99	44.932	ENSUAMG00000012231	URB1	98	45.020	Ursus_americanus
ENSGACG00000011703	urb1	88	46.927	ENSUMAG00000017419	URB1	94	46.301	Ursus_maritimus
ENSGACG00000011703	urb1	70	63.636	ENSVPAG00000001164	URB1	69	63.636	Vicugna_pacos
ENSGACG00000011703	urb1	99	44.693	ENSVVUG00000000551	URB1	98	44.737	Vulpes_vulpes
ENSGACG00000011703	urb1	98	44.945	ENSXETG00000009895	urb1	99	44.473	Xenopus_tropicalis
ENSGACG00000011703	urb1	99	75.152	ENSXCOG00000005500	urb1	99	75.152	Xiphophorus_couchianus
ENSGACG00000011703	urb1	99	76.364	ENSXMAG00000007253	urb1	99	76.364	Xiphophorus_maculatus