EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011797 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 11916 bases
Position: chrgroupXVII:13787243-13799158
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015611	SHQ1	PF04925.15	5.1e-65	1	1
ENSGACP00000015606	SHQ1	PF04925.15	3.2e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015642	-	1477	-	ENSGACP00000015611	387 (aa)	-	G3PDD7
ENSGACT00000015637	-	1468	-	ENSGACP00000015606	385 (aa)	-	G3PDD2

Gene Model

Click here to download ENSGACG00000011797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011797	shq1	100	61.461	ENSG00000144736	SHQ1	100	74.000	Homo_sapiens
ENSGACG00000011797	shq1	100	80.977	ENSAPOG00000000397	shq1	64	81.234	Acanthochromis_polyacanthus
ENSGACG00000011797	shq1	100	60.453	ENSAMEG00000015140	SHQ1	69	60.202	Ailuropoda_melanoleuca
ENSGACG00000011797	shq1	100	80.412	ENSACIG00000021249	shq1	64	80.412	Amphilophus_citrinellus
ENSGACG00000011797	shq1	100	81.234	ENSAOCG00000023311	shq1	63	81.491	Amphiprion_ocellaris
ENSGACG00000011797	shq1	100	80.977	ENSAPEG00000021686	shq1	64	81.234	Amphiprion_percula
ENSGACG00000011797	shq1	100	82.776	ENSATEG00000008475	shq1	64	82.776	Anabas_testudineus
ENSGACG00000011797	shq1	100	58.145	ENSAPLG00000013926	SHQ1	78	57.895	Anas_platyrhynchos
ENSGACG00000011797	shq1	100	61.558	ENSACAG00000014809	SHQ1	59	61.809	Anolis_carolinensis
ENSGACG00000011797	shq1	97	44.297	ENSANAG00000030500	-	65	44.022	Aotus_nancymaae
ENSGACG00000011797	shq1	100	59.950	ENSANAG00000029241	SHQ1	69	59.194	Aotus_nancymaae
ENSGACG00000011797	shq1	100	80.463	ENSACLG00000023077	shq1	62	80.720	Astatotilapia_calliptera
ENSGACG00000011797	shq1	95	68.733	ENSAMXG00000043822	shq1	65	67.925	Astyanax_mexicanus
ENSGACG00000011797	shq1	100	61.209	ENSBTAG00000005436	SHQ1	68	60.957	Bos_taurus
ENSGACG00000011797	shq1	100	33.584	WBGene00021655	Y48A5A.1	91	33.668	Caenorhabditis_elegans
ENSGACG00000011797	shq1	100	59.950	ENSCJAG00000015131	SHQ1	68	59.194	Callithrix_jacchus
ENSGACG00000011797	shq1	100	57.935	ENSCAFG00000006434	SHQ1	68	58.186	Canis_familiaris
ENSGACG00000011797	shq1	100	58.186	ENSCAFG00020016743	SHQ1	68	58.438	Canis_lupus_dingo
ENSGACG00000011797	shq1	100	59.698	ENSCHIG00000012271	SHQ1	62	60.957	Capra_hircus
ENSGACG00000011797	shq1	100	57.614	ENSTSYG00000014439	SHQ1	69	57.614	Carlito_syrichta
ENSGACG00000011797	shq1	88	53.097	ENSCAPG00000009343	SHQ1	52	75.610	Cavia_aperea
ENSGACG00000011797	shq1	100	59.343	ENSCPOG00000011443	SHQ1	68	59.343	Cavia_porcellus
ENSGACG00000011797	shq1	98	50.758	ENSCCAG00000027080	SHQ1	60	72.917	Cebus_capucinus
ENSGACG00000011797	shq1	99	45.974	ENSCCAG00000036087	-	67	45.358	Cebus_capucinus
ENSGACG00000011797	shq1	100	60.957	ENSCATG00000041238	SHQ1	68	60.202	Cercocebus_atys
ENSGACG00000011797	shq1	100	58.438	ENSCLAG00000004206	SHQ1	69	59.698	Chinchilla_lanigera
ENSGACG00000011797	shq1	77	59.091	ENSCSAG00000011514	SHQ1	63	58.117	Chlorocebus_sabaeus
ENSGACG00000011797	shq1	87	49.565	ENSCHOG00000003273	-	84	63.793	Choloepus_hoffmanni
ENSGACG00000011797	shq1	100	59.296	ENSCPBG00000006441	SHQ1	65	58.794	Chrysemys_picta_bellii
ENSGACG00000011797	shq1	100	43.367	ENSCING00000008013	-	85	43.445	Ciona_intestinalis
ENSGACG00000011797	shq1	100	41.645	ENSCSAVG00000002332	-	91	40.253	Ciona_savignyi
ENSGACG00000011797	shq1	100	61.404	ENSCANG00000039295	SHQ1	69	60.453	Colobus_angolensis_palliatus
ENSGACG00000011797	shq1	100	59.446	ENSCGRG00001012583	Shq1	58	73.171	Cricetulus_griseus_chok1gshd
ENSGACG00000011797	shq1	100	59.446	ENSCGRG00000009849	Shq1	58	73.171	Cricetulus_griseus_crigri
ENSGACG00000011797	shq1	100	78.608	ENSCSEG00000007829	shq1	63	78.608	Cynoglossus_semilaevis
ENSGACG00000011797	shq1	100	78.149	ENSCVAG00000020049	shq1	67	77.635	Cyprinodon_variegatus
ENSGACG00000011797	shq1	100	66.838	ENSDARG00000058522	shq1	66	66.581	Danio_rerio
ENSGACG00000011797	shq1	100	61.461	ENSDNOG00000033937	SHQ1	69	61.461	Dasypus_novemcinctus
ENSGACG00000011797	shq1	100	52.393	ENSETEG00000005766	SHQ1	69	52.393	Echinops_telfairi
ENSGACG00000011797	shq1	77	51.974	ENSEBUG00000005445	shq1	71	50.637	Eptatretus_burgeri
ENSGACG00000011797	shq1	100	59.296	ENSEASG00005002237	SHQ1	69	60.705	Equus_asinus_asinus
ENSGACG00000011797	shq1	100	59.799	ENSECAG00000015673	SHQ1	67	61.209	Equus_caballus
ENSGACG00000011797	shq1	100	59.698	ENSEEUG00000010568	SHQ1	69	59.698	Erinaceus_europaeus
ENSGACG00000011797	shq1	100	74.742	ENSELUG00000003476	shq1	81	70.000	Esox_lucius
ENSGACG00000011797	shq1	100	60.453	ENSFCAG00000012781	SHQ1	69	60.202	Felis_catus
ENSGACG00000011797	shq1	100	61.809	ENSFALG00000013428	SHQ1	64	61.558	Ficedula_albicollis
ENSGACG00000011797	shq1	100	58.690	ENSFDAG00000005595	SHQ1	61	58.438	Fukomys_damarensis
ENSGACG00000011797	shq1	100	76.154	ENSFHEG00000017552	shq1	67	75.385	Fundulus_heteroclitus
ENSGACG00000011797	shq1	100	71.649	ENSGMOG00000007350	shq1	100	71.649	Gadus_morhua
ENSGACG00000011797	shq1	100	59.596	ENSGALG00000007798	SHQ1	66	57.531	Gallus_gallus
ENSGACG00000011797	shq1	100	60.957	ENSGGOG00000034818	SHQ1	68	60.202	Gorilla_gorilla
ENSGACG00000011797	shq1	100	80.206	ENSHBUG00000010857	shq1	65	80.463	Haplochromis_burtoni
ENSGACG00000011797	shq1	100	58.942	ENSHGLG00000003637	SHQ1	61	58.690	Heterocephalus_glaber_female
ENSGACG00000011797	shq1	100	58.942	ENSHGLG00100011957	SHQ1	62	58.690	Heterocephalus_glaber_male
ENSGACG00000011797	shq1	100	72.351	ENSHCOG00000010799	shq1	67	71.392	Hippocampus_comes
ENSGACG00000011797	shq1	100	66.324	ENSIPUG00000001247	shq1	67	66.067	Ictalurus_punctatus
ENSGACG00000011797	shq1	100	58.690	ENSSTOG00000010043	SHQ1	72	58.690	Ictidomys_tridecemlineatus
ENSGACG00000011797	shq1	100	60.804	ENSJJAG00000017611	Shq1	57	75.610	Jaculus_jaculus
ENSGACG00000011797	shq1	100	78.462	ENSKMAG00000004457	shq1	66	78.718	Kryptolebias_marmoratus
ENSGACG00000011797	shq1	100	61.965	ENSLACG00000014243	SHQ1	60	61.713	Latimeria_chalumnae
ENSGACG00000011797	shq1	100	67.506	ENSLOCG00000009970	shq1	69	67.254	Lepisosteus_oculatus
ENSGACG00000011797	shq1	100	60.957	ENSMFAG00000039148	SHQ1	68	60.202	Macaca_fascicularis
ENSGACG00000011797	shq1	100	42.132	ENSMFAG00000037396	-	67	41.388	Macaca_fascicularis
ENSGACG00000011797	shq1	88	59.026	ENSMMUG00000009571	SHQ1	63	58.166	Macaca_mulatta
ENSGACG00000011797	shq1	100	42.132	ENSMMUG00000021761	-	67	41.388	Macaca_mulatta
ENSGACG00000011797	shq1	100	60.957	ENSMNEG00000032667	SHQ1	68	60.202	Macaca_nemestrina
ENSGACG00000011797	shq1	100	60.453	ENSMLEG00000038493	SHQ1	68	59.698	Mandrillus_leucophaeus
ENSGACG00000011797	shq1	100	81.026	ENSMAMG00000023432	shq1	61	80.769	Mastacembelus_armatus
ENSGACG00000011797	shq1	100	80.463	ENSMZEG00005008649	shq1	65	80.720	Maylandia_zebra
ENSGACG00000011797	shq1	100	59.194	ENSMGAG00000009640	SHQ1	67	57.143	Meleagris_gallopavo
ENSGACG00000011797	shq1	100	59.950	ENSMAUG00000022030	Shq1	58	75.610	Mesocricetus_auratus
ENSGACG00000011797	shq1	100	59.950	ENSMICG00000009224	SHQ1	68	59.950	Microcebus_murinus
ENSGACG00000011797	shq1	100	60.202	ENSMOCG00000017836	Shq1	58	75.610	Microtus_ochrogaster
ENSGACG00000011797	shq1	100	79.381	ENSMMOG00000010569	shq1	66	78.866	Mola_mola
ENSGACG00000011797	shq1	100	56.533	ENSMODG00000003926	SHQ1	71	56.281	Monodelphis_domestica
ENSGACG00000011797	shq1	100	82.051	ENSMALG00000008870	shq1	65	82.308	Monopterus_albus
ENSGACG00000011797	shq1	100	59.446	MGP_CAROLIEiJ_G0028689	Shq1	57	75.610	Mus_caroli
ENSGACG00000011797	shq1	100	60.202	ENSMUSG00000035378	Shq1	57	78.049	Mus_musculus
ENSGACG00000011797	shq1	100	60.705	MGP_PahariEiJ_G0022440	Shq1	57	75.610	Mus_pahari
ENSGACG00000011797	shq1	100	59.698	MGP_SPRETEiJ_G0029717	Shq1	57	78.049	Mus_spretus
ENSGACG00000011797	shq1	100	59.950	ENSMPUG00000017006	SHQ1	67	59.698	Mustela_putorius_furo
ENSGACG00000011797	shq1	88	57.550	ENSMLUG00000013539	SHQ1	66	57.265	Myotis_lucifugus
ENSGACG00000011797	shq1	100	51.163	ENSNGAG00000023317	Shq1	68	51.938	Nannospalax_galili
ENSGACG00000011797	shq1	77	78.667	ENSNBRG00000024004	shq1	59	79.000	Neolamprologus_brichardi
ENSGACG00000011797	shq1	100	61.209	ENSNLEG00000002731	SHQ1	68	60.453	Nomascus_leucogenys
ENSGACG00000011797	shq1	87	53.704	ENSMEUG00000009350	-	65	53.704	Notamacropus_eugenii
ENSGACG00000011797	shq1	67	63.793	ENSOPRG00000013963	-	73	63.793	Ochotona_princeps
ENSGACG00000011797	shq1	100	59.848	ENSODEG00000009192	SHQ1	61	80.488	Octodon_degus
ENSGACG00000011797	shq1	100	79.949	ENSONIG00000020264	shq1	65	80.206	Oreochromis_niloticus
ENSGACG00000011797	shq1	100	59.296	ENSOCUG00000016695	SHQ1	68	58.690	Oryctolagus_cuniculus
ENSGACG00000011797	shq1	100	77.577	ENSORLG00000023538	shq1	71	77.577	Oryzias_latipes
ENSGACG00000011797	shq1	100	77.320	ENSORLG00020003697	shq1	70	77.320	Oryzias_latipes_hni
ENSGACG00000011797	shq1	100	76.804	ENSORLG00015021040	shq1	71	76.804	Oryzias_latipes_hsok
ENSGACG00000011797	shq1	100	78.663	ENSOMEG00000001225	shq1	70	78.663	Oryzias_melastigma
ENSGACG00000011797	shq1	100	58.500	ENSOGAG00000003898	SHQ1	70	59.000	Otolemur_garnettii
ENSGACG00000011797	shq1	100	60.349	ENSOARG00000009547	SHQ1	69	60.100	Ovis_aries
ENSGACG00000011797	shq1	100	43.669	ENSPPAG00000043263	-	67	40.806	Pan_paniscus
ENSGACG00000011797	shq1	100	61.461	ENSPPAG00000027714	SHQ1	68	60.705	Pan_paniscus
ENSGACG00000011797	shq1	100	60.453	ENSPPRG00000004769	SHQ1	69	60.202	Panthera_pardus
ENSGACG00000011797	shq1	100	57.653	ENSPTIG00000011478	SHQ1	68	57.398	Panthera_tigris_altaica
ENSGACG00000011797	shq1	100	43.411	ENSPTRG00000048303	-	67	40.816	Pan_troglodytes
ENSGACG00000011797	shq1	100	61.461	ENSPTRG00000015106	SHQ1	68	60.705	Pan_troglodytes
ENSGACG00000011797	shq1	100	60.202	ENSPANG00000002881	SHQ1	68	60.453	Papio_anubis
ENSGACG00000011797	shq1	100	68.462	ENSPKIG00000021517	shq1	69	67.949	Paramormyrops_kingsleyae
ENSGACG00000011797	shq1	100	58.396	ENSPSIG00000005536	SHQ1	65	58.396	Pelodiscus_sinensis
ENSGACG00000011797	shq1	100	71.392	ENSPMGG00000008838	shq1	66	71.392	Periophthalmus_magnuspinnatus
ENSGACG00000011797	shq1	100	60.453	ENSPEMG00000000251	Shq1	57	75.610	Peromyscus_maniculatus_bairdii
ENSGACG00000011797	shq1	99	59.391	ENSPMAG00000005372	shq1	89	60.152	Petromyzon_marinus
ENSGACG00000011797	shq1	99	76.410	ENSPFOG00000003118	shq1	72	76.667	Poecilia_formosa
ENSGACG00000011797	shq1	77	76.589	ENSPMEG00000011076	shq1	66	76.254	Poecilia_mexicana
ENSGACG00000011797	shq1	88	75.660	ENSPREG00000000591	shq1	66	75.660	Poecilia_reticulata
ENSGACG00000011797	shq1	100	61.461	ENSPPYG00000013717	SHQ1	68	60.705	Pongo_abelii
ENSGACG00000011797	shq1	100	61.461	ENSPCAG00000009035	SHQ1	69	61.713	Procavia_capensis
ENSGACG00000011797	shq1	100	58.647	ENSPCOG00000008415	SHQ1	68	59.148	Propithecus_coquereli
ENSGACG00000011797	shq1	100	59.548	ENSPVAG00000017392	SHQ1	69	60.202	Pteropus_vampyrus
ENSGACG00000011797	shq1	100	80.463	ENSPNYG00000003878	shq1	65	80.720	Pundamilia_nyererei
ENSGACG00000011797	shq1	100	70.437	ENSPNAG00000026840	shq1	64	70.437	Pygocentrus_nattereri
ENSGACG00000011797	shq1	100	60.453	ENSRNOG00000005433	Shq1	66	59.698	Rattus_norvegicus
ENSGACG00000011797	shq1	100	59.021	ENSRBIG00000026280	SHQ1	70	57.506	Rhinopithecus_bieti
ENSGACG00000011797	shq1	100	61.209	ENSRROG00000034126	SHQ1	69	60.453	Rhinopithecus_roxellana
ENSGACG00000011797	shq1	100	53.652	ENSSBOG00000021038	SHQ1	68	51.365	Saimiri_boliviensis_boliviensis
ENSGACG00000011797	shq1	100	58.040	ENSSHAG00000015077	SHQ1	70	58.040	Sarcophilus_harrisii
ENSGACG00000011797	shq1	100	71.059	ENSSFOG00015016241	shq1	71	70.543	Scleropages_formosus
ENSGACG00000011797	shq1	100	83.033	ENSSMAG00000016151	shq1	65	82.776	Scophthalmus_maximus
ENSGACG00000011797	shq1	100	83.290	ENSSDUG00000011986	shq1	64	83.548	Seriola_dumerili
ENSGACG00000011797	shq1	100	82.474	ENSSLDG00000013908	shq1	64	82.474	Seriola_lalandi_dorsalis
ENSGACG00000011797	shq1	85	56.845	ENSSARG00000007119	SHQ1	59	55.952	Sorex_araneus
ENSGACG00000011797	shq1	77	55.987	ENSSPUG00000011526	-	58	55.987	Sphenodon_punctatus
ENSGACG00000011797	shq1	100	60.804	ENSSSCG00000011518	SHQ1	68	60.453	Sus_scrofa
ENSGACG00000011797	shq1	100	61.097	ENSTGUG00000009933	SHQ1	69	61.097	Taeniopygia_guttata
ENSGACG00000011797	shq1	100	72.680	ENSTRUG00000009446	shq1	66	72.680	Takifugu_rubripes
ENSGACG00000011797	shq1	100	74.046	ENSTNIG00000007354	shq1	87	73.537	Tetraodon_nigroviridis
ENSGACG00000011797	shq1	100	59.950	ENSTTRG00000005320	SHQ1	69	59.950	Tursiops_truncatus
ENSGACG00000011797	shq1	100	61.757	ENSUMAG00000024031	SHQ1	67	61.499	Ursus_maritimus
ENSGACG00000011797	shq1	66	59.848	ENSVPAG00000004880	SHQ1	66	51.289	Vicugna_pacos
ENSGACG00000011797	shq1	100	57.935	ENSVVUG00000013906	SHQ1	68	58.186	Vulpes_vulpes
ENSGACG00000011797	shq1	100	59.439	ENSXETG00000032215	shq1	64	59.184	Xenopus_tropicalis