EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011808 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4901 bases
Position: chrgroupXI:10852355-10857255
Accession: ZDB-GENE-050913-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015618	zf-C2H2	PF00096.26	1.9e-31	1	5
ENSGACP00000015618	zf-C2H2	PF00096.26	1.9e-31	2	5
ENSGACP00000015618	zf-C2H2	PF00096.26	1.9e-31	3	5
ENSGACP00000015618	zf-C2H2	PF00096.26	1.9e-31	4	5
ENSGACP00000015618	zf-C2H2	PF00096.26	1.9e-31	5	5
ENSGACP00000015618	zf-met	PF12874.7	1.3e-06	1	1
ENSGACP00000015618	zf-C2H2_jaz	PF12171.8	3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015649	-	2178	-	ENSGACP00000015618	719 (aa)	-	G3PDE4

Gene Model

Click here to download ENSGACG00000011808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011808	e4f1	64	37.226	ENSGACG00000010393	-	99	40.000
ENSGACG00000011808	e4f1	69	37.500	ENSGACG00000012611	-	82	37.500
ENSGACG00000011808	e4f1	73	43.478	ENSGACG00000010051	-	83	47.368
ENSGACG00000011808	e4f1	73	36.994	ENSGACG00000001523	-	99	40.909
ENSGACG00000011808	e4f1	59	37.714	ENSGACG00000013660	-	99	43.902
ENSGACG00000011808	e4f1	85	36.420	ENSGACG00000004765	-	100	43.902
ENSGACG00000011808	e4f1	58	38.462	ENSGACG00000004761	-	100	43.210
ENSGACG00000011808	e4f1	60	37.888	ENSGACG00000005239	-	99	45.000
ENSGACG00000011808	e4f1	69	36.641	ENSGACG00000018816	-	100	39.683
ENSGACG00000011808	e4f1	67	41.026	ENSGACG00000008733	znf646	77	41.026
ENSGACG00000011808	e4f1	71	38.028	ENSGACG00000004549	-	100	42.353
ENSGACG00000011808	e4f1	70	36.527	ENSGACG00000018088	si:dkey-7i4.5	99	40.000
ENSGACG00000011808	e4f1	54	35.897	ENSGACG00000001166	-	99	37.209
ENSGACG00000011808	e4f1	69	34.078	ENSGACG00000012517	-	99	38.272
ENSGACG00000011808	e4f1	59	39.189	ENSGACG00000011640	zbtb24	50	39.189
ENSGACG00000011808	e4f1	60	32.584	ENSGACG00000002626	si:ch211-216l23.1	56	35.849
ENSGACG00000011808	e4f1	60	38.318	ENSGACG00000010384	-	99	46.988
ENSGACG00000011808	e4f1	59	41.176	ENSGACG00000001358	-	99	41.250
ENSGACG00000011808	e4f1	62	42.500	ENSGACG00000019550	-	94	42.857
ENSGACG00000011808	e4f1	59	44.118	ENSGACG00000010515	ZNF628	100	51.064
ENSGACG00000011808	e4f1	58	36.667	ENSGACG00000019863	-	99	40.299
ENSGACG00000011808	e4f1	74	38.095	ENSGACG00000005553	znf236	98	43.590
ENSGACG00000011808	e4f1	73	41.935	ENSGACG00000013652	-	99	43.750
ENSGACG00000011808	e4f1	60	43.590	ENSGACG00000014395	-	99	44.706
ENSGACG00000011808	e4f1	72	33.182	ENSGACG00000003258	znf319b	87	33.182
ENSGACG00000011808	e4f1	69	40.341	ENSGACG00000001377	-	93	42.105
ENSGACG00000011808	e4f1	71	35.404	ENSGACG00000001371	-	99	41.333
ENSGACG00000011808	e4f1	61	31.925	ENSGACG00000004478	-	100	44.286
ENSGACG00000011808	e4f1	71	35.583	ENSGACG00000015729	-	97	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011808	e4f1	100	69.891	ENSCSEG00000015852	e4f1	88	79.513	Cynoglossus_semilaevis
ENSGACG00000011808	e4f1	100	72.930	ENSCVAG00000002788	e4f1	100	73.587	Cyprinodon_variegatus
ENSGACG00000011808	e4f1	69	40.106	ENSEBUG00000016435	e4f1	62	60.825	Eptatretus_burgeri
ENSGACG00000011808	e4f1	99	71.319	ENSFHEG00000022551	e4f1	97	71.264	Fundulus_heteroclitus
ENSGACG00000011808	e4f1	82	69.672	ENSGMOG00000011409	e4f1	95	70.181	Gadus_morhua
ENSGACG00000011808	e4f1	100	67.617	ENSHCOG00000016455	e4f1	100	67.876	Hippocampus_comes
ENSGACG00000011808	e4f1	100	56.309	ENSIPUG00000005379	e4f1	99	56.716	Ictalurus_punctatus
ENSGACG00000011808	e4f1	100	76.410	ENSLBEG00000026373	e4f1	100	76.795	Labrus_bergylta
ENSGACG00000011808	e4f1	100	77.210	ENSMMOG00000007612	e4f1	100	77.624	Mola_mola
ENSGACG00000011808	e4f1	100	76.278	ENSMALG00000007314	e4f1	100	76.802	Monopterus_albus
ENSGACG00000011808	e4f1	100	72.294	ENSORLG00000009160	e4f1	100	72.445	Oryzias_latipes
ENSGACG00000011808	e4f1	100	70.574	ENSORLG00020017974	e4f1	100	70.839	Oryzias_latipes_hni
ENSGACG00000011808	e4f1	100	73.127	ENSORLG00015007385	e4f1	100	73.541	Oryzias_latipes_hsok
ENSGACG00000011808	e4f1	100	74.479	ENSOMEG00000012220	e4f1	100	73.438	Oryzias_melastigma
ENSGACG00000011808	e4f1	100	59.788	ENSPKIG00000001942	e4f1	99	59.342	Paramormyrops_kingsleyae
ENSGACG00000011808	e4f1	99	66.553	ENSPMGG00000020527	e4f1	90	84.932	Periophthalmus_magnuspinnatus
ENSGACG00000011808	e4f1	99	56.868	ENSSFOG00015021291	e4f1	99	56.653	Scleropages_formosus
ENSGACG00000011808	e4f1	100	78.323	ENSSMAG00000014720	e4f1	100	77.548	Scophthalmus_maximus
ENSGACG00000011808	e4f1	97	49.146	ENSSPUG00000011420	E4F1	97	48.450	Sphenodon_punctatus
ENSGACG00000011808	e4f1	100	71.411	ENSTRUG00000005176	e4f1	100	70.403	Takifugu_rubripes
ENSGACG00000011808	e4f1	96	71.078	ENSTNIG00000018001	e4f1	100	71.214	Tetraodon_nigroviridis
ENSGACG00000011808	e4f1	67	71.681	ENSXETG00000016091	e4f1	99	74.286	Xenopus_tropicalis