EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011852 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6555 bases
Position: chrgroupXVIII:12488929-12495483
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015675	HAT	PF02184.16	1.4e-28	1	2
ENSGACP00000015675	HAT	PF02184.16	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015706	-	2421	-	ENSGACP00000015675	750 (aa)	-	G3PDK1

Gene Model

Click here to download ENSGACG00000011852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011852	crnkl1	92	84.425	ENSG00000101343	CRNKL1	99	84.425	Homo_sapiens
ENSGACG00000011852	crnkl1	98	89.222	ENSAPOG00000009705	crnkl1	99	93.577	Acanthochromis_polyacanthus
ENSGACG00000011852	crnkl1	90	85.125	ENSAMEG00000000270	CRNKL1	82	85.234	Ailuropoda_melanoleuca
ENSGACG00000011852	crnkl1	94	88.608	ENSACIG00000015267	crnkl1	100	85.146	Amphilophus_citrinellus
ENSGACG00000011852	crnkl1	100	85.992	ENSAOCG00000021964	crnkl1	100	87.417	Amphiprion_ocellaris
ENSGACG00000011852	crnkl1	100	86.216	ENSAPEG00000015041	crnkl1	100	87.566	Amphiprion_percula
ENSGACG00000011852	crnkl1	95	89.106	ENSATEG00000001068	crnkl1	94	89.106	Anabas_testudineus
ENSGACG00000011852	crnkl1	87	86.064	ENSAPLG00000013105	CRNKL1	97	84.558	Anas_platyrhynchos
ENSGACG00000011852	crnkl1	92	84.827	ENSACAG00000005284	CRNKL1	100	84.827	Anolis_carolinensis
ENSGACG00000011852	crnkl1	84	85.578	ENSANAG00000024889	CRNKL1	99	85.578	Aotus_nancymaae
ENSGACG00000011852	crnkl1	98	86.202	ENSACLG00000010813	crnkl1	100	85.224	Astatotilapia_calliptera
ENSGACG00000011852	crnkl1	89	89.640	ENSAMXG00000018334	crnkl1	94	84.488	Astyanax_mexicanus
ENSGACG00000011852	crnkl1	93	84.438	ENSBTAG00000008472	CRNKL1	99	84.438	Bos_taurus
ENSGACG00000011852	crnkl1	86	62.519	WBGene00019762	M03F8.3	96	58.946	Caenorhabditis_elegans
ENSGACG00000011852	crnkl1	92	84.571	ENSCJAG00000005393	CRNKL1	99	84.571	Callithrix_jacchus
ENSGACG00000011852	crnkl1	88	86.707	ENSCAFG00000005333	CRNKL1	94	85.088	Canis_familiaris
ENSGACG00000011852	crnkl1	89	86.807	ENSCAFG00020027488	CRNKL1	99	85.088	Canis_lupus_dingo
ENSGACG00000011852	crnkl1	93	84.294	ENSCHIG00000013171	CRNKL1	99	84.294	Capra_hircus
ENSGACG00000011852	crnkl1	92	84.279	ENSTSYG00000004197	CRNKL1	99	84.279	Carlito_syrichta
ENSGACG00000011852	crnkl1	84	82.658	ENSCAPG00000010501	CRNKL1	99	82.658	Cavia_aperea
ENSGACG00000011852	crnkl1	91	84.064	ENSCPOG00000004418	CRNKL1	99	84.064	Cavia_porcellus
ENSGACG00000011852	crnkl1	92	84.716	ENSCCAG00000027037	CRNKL1	99	84.716	Cebus_capucinus
ENSGACG00000011852	crnkl1	92	84.279	ENSCATG00000034247	CRNKL1	99	84.279	Cercocebus_atys
ENSGACG00000011852	crnkl1	91	84.357	ENSCLAG00000013859	CRNKL1	99	84.357	Chinchilla_lanigera
ENSGACG00000011852	crnkl1	92	84.279	ENSCSAG00000011434	CRNKL1	99	84.279	Chlorocebus_sabaeus
ENSGACG00000011852	crnkl1	90	84.389	ENSCHOG00000006371	CRNKL1	83	84.503	Choloepus_hoffmanni
ENSGACG00000011852	crnkl1	91	85.401	ENSCPBG00000023501	CRNKL1	99	85.401	Chrysemys_picta_bellii
ENSGACG00000011852	crnkl1	89	68.271	ENSCING00000002709	-	99	67.299	Ciona_intestinalis
ENSGACG00000011852	crnkl1	92	84.279	ENSCANG00000038789	CRNKL1	99	84.279	Colobus_angolensis_palliatus
ENSGACG00000011852	crnkl1	91	84.503	ENSCGRG00001001115	-	99	84.503	Cricetulus_griseus_chok1gshd
ENSGACG00000011852	crnkl1	91	84.503	ENSCGRG00001000687	-	99	84.503	Cricetulus_griseus_chok1gshd
ENSGACG00000011852	crnkl1	91	84.503	ENSCGRG00000007854	Crnkl1	99	84.503	Cricetulus_griseus_crigri
ENSGACG00000011852	crnkl1	98	86.122	ENSCSEG00000005594	crnkl1	91	87.673	Cynoglossus_semilaevis
ENSGACG00000011852	crnkl1	89	92.066	ENSCVAG00000015172	crnkl1	98	86.557	Cyprinodon_variegatus
ENSGACG00000011852	crnkl1	95	84.874	ENSDARG00000007901	crnkl1	96	84.807	Danio_rerio
ENSGACG00000011852	crnkl1	89	86.507	ENSDNOG00000016226	CRNKL1	92	86.507	Dasypus_novemcinctus
ENSGACG00000011852	crnkl1	89	78.743	ENSDORG00000030174	-	99	78.743	Dipodomys_ordii
ENSGACG00000011852	crnkl1	89	79.580	ENSDORG00000023724	-	98	79.580	Dipodomys_ordii
ENSGACG00000011852	crnkl1	91	83.019	ENSDORG00000000394	-	99	83.019	Dipodomys_ordii
ENSGACG00000011852	crnkl1	88	68.216	FBgn0000377	crn	99	65.665	Drosophila_melanogaster
ENSGACG00000011852	crnkl1	89	75.862	ENSETEG00000003711	CRNKL1	81	75.862	Echinops_telfairi
ENSGACG00000011852	crnkl1	92	59.339	ENSEBUG00000013461	crnkl1	98	54.663	Eptatretus_burgeri
ENSGACG00000011852	crnkl1	91	85.234	ENSEASG00005002072	CRNKL1	99	85.234	Equus_asinus_asinus
ENSGACG00000011852	crnkl1	91	85.234	ENSECAG00000022215	CRNKL1	99	85.234	Equus_caballus
ENSGACG00000011852	crnkl1	90	82.327	ENSEEUG00000000413	CRNKL1	92	82.456	Erinaceus_europaeus
ENSGACG00000011852	crnkl1	89	89.820	ENSELUG00000015424	crnkl1	99	85.836	Esox_lucius
ENSGACG00000011852	crnkl1	91	85.234	ENSFCAG00000000714	CRNKL1	99	85.234	Felis_catus
ENSGACG00000011852	crnkl1	87	84.992	ENSFALG00000004611	CRNKL1	97	84.992	Ficedula_albicollis
ENSGACG00000011852	crnkl1	91	84.357	ENSFDAG00000000604	CRNKL1	99	84.357	Fukomys_damarensis
ENSGACG00000011852	crnkl1	100	83.355	ENSFHEG00000013163	crnkl1	97	85.185	Fundulus_heteroclitus
ENSGACG00000011852	crnkl1	89	88.657	ENSGMOG00000007609	crnkl1	98	84.432	Gadus_morhua
ENSGACG00000011852	crnkl1	89	85.778	ENSGALG00000008429	CRNKL1	97	85.778	Gallus_gallus
ENSGACG00000011852	crnkl1	90	91.667	ENSGAFG00000014249	crnkl1	93	87.275	Gambusia_affinis
ENSGACG00000011852	crnkl1	87	84.733	ENSGAGG00000021233	CRNKL1	99	84.733	Gopherus_agassizii
ENSGACG00000011852	crnkl1	92	84.425	ENSGGOG00000014176	CRNKL1	99	84.425	Gorilla_gorilla
ENSGACG00000011852	crnkl1	97	87.295	ENSHBUG00000005246	crnkl1	100	85.000	Haplochromis_burtoni
ENSGACG00000011852	crnkl1	91	84.357	ENSHGLG00000010856	CRNKL1	99	84.357	Heterocephalus_glaber_female
ENSGACG00000011852	crnkl1	91	84.357	ENSHGLG00100011521	CRNKL1	99	84.357	Heterocephalus_glaber_male
ENSGACG00000011852	crnkl1	89	89.820	ENSHCOG00000006420	crnkl1	97	89.333	Hippocampus_comes
ENSGACG00000011852	crnkl1	89	75.753	ENSIPUG00000006836	-	98	75.410	Ictalurus_punctatus
ENSGACG00000011852	crnkl1	92	85.652	ENSIPUG00000006751	crnkl1	98	83.944	Ictalurus_punctatus
ENSGACG00000011852	crnkl1	85	69.182	ENSIPUG00000000315	-	99	70.283	Ictalurus_punctatus
ENSGACG00000011852	crnkl1	91	84.942	ENSSTOG00000014747	CRNKL1	99	84.942	Ictidomys_tridecemlineatus
ENSGACG00000011852	crnkl1	91	83.548	ENSJJAG00000016926	Crnkl1	99	83.548	Jaculus_jaculus
ENSGACG00000011852	crnkl1	97	88.000	ENSKMAG00000003620	crnkl1	91	87.967	Kryptolebias_marmoratus
ENSGACG00000011852	crnkl1	89	75.781	ENSLBEG00000003543	crnkl1	94	75.887	Labrus_bergylta
ENSGACG00000011852	crnkl1	91	86.324	ENSLACG00000001129	CRNKL1	99	86.324	Latimeria_chalumnae
ENSGACG00000011852	crnkl1	89	89.339	ENSLOCG00000016889	crnkl1	95	87.808	Lepisosteus_oculatus
ENSGACG00000011852	crnkl1	91	84.380	ENSLAFG00000004512	CRNKL1	99	85.109	Loxodonta_africana
ENSGACG00000011852	crnkl1	92	84.279	ENSMFAG00000039893	CRNKL1	99	84.279	Macaca_fascicularis
ENSGACG00000011852	crnkl1	92	84.279	ENSMMUG00000007709	CRNKL1	99	84.279	Macaca_mulatta
ENSGACG00000011852	crnkl1	92	84.279	ENSMNEG00000037490	CRNKL1	99	84.279	Macaca_nemestrina
ENSGACG00000011852	crnkl1	92	84.279	ENSMLEG00000034885	CRNKL1	99	84.279	Mandrillus_leucophaeus
ENSGACG00000011852	crnkl1	98	87.312	ENSMAMG00000008757	crnkl1	93	88.333	Mastacembelus_armatus
ENSGACG00000011852	crnkl1	100	85.601	ENSMZEG00005022345	crnkl1	100	85.317	Maylandia_zebra
ENSGACG00000011852	crnkl1	89	85.329	ENSMGAG00000003452	CRNKL1	92	85.329	Meleagris_gallopavo
ENSGACG00000011852	crnkl1	91	84.503	ENSMAUG00000020764	Crnkl1	99	84.503	Mesocricetus_auratus
ENSGACG00000011852	crnkl1	92	84.279	ENSMICG00000006048	CRNKL1	99	84.279	Microcebus_murinus
ENSGACG00000011852	crnkl1	88	61.805	ENSMOCG00000004179	-	95	61.883	Microtus_ochrogaster
ENSGACG00000011852	crnkl1	91	76.978	ENSMOCG00000000681	-	99	76.978	Microtus_ochrogaster
ENSGACG00000011852	crnkl1	84	90.981	ENSMMOG00000017601	crnkl1	97	90.981	Mola_mola
ENSGACG00000011852	crnkl1	91	82.659	ENSMODG00000005961	-	99	82.659	Monodelphis_domestica
ENSGACG00000011852	crnkl1	89	80.030	ENSMODG00000010857	-	97	80.030	Monodelphis_domestica
ENSGACG00000011852	crnkl1	99	61.097	ENSMALG00000011211	crnkl1	93	65.152	Monopterus_albus
ENSGACG00000011852	crnkl1	89	86.357	MGP_CAROLIEiJ_G0024394	Crnkl1	97	86.357	Mus_caroli
ENSGACG00000011852	crnkl1	91	84.795	ENSMUSG00000001767	Crnkl1	99	84.795	Mus_musculus
ENSGACG00000011852	crnkl1	91	83.480	MGP_PahariEiJ_G0025838	Crnkl1	99	83.480	Mus_pahari
ENSGACG00000011852	crnkl1	91	84.795	MGP_SPRETEiJ_G0025312	Crnkl1	99	84.795	Mus_spretus
ENSGACG00000011852	crnkl1	91	85.234	ENSMPUG00000001226	CRNKL1	99	85.234	Mustela_putorius_furo
ENSGACG00000011852	crnkl1	90	84.978	ENSMLUG00000016513	CRNKL1	89	85.088	Myotis_lucifugus
ENSGACG00000011852	crnkl1	91	82.471	ENSNGAG00000023097	Crnkl1	99	82.471	Nannospalax_galili
ENSGACG00000011852	crnkl1	96	88.089	ENSNBRG00000007867	crnkl1	99	85.828	Neolamprologus_brichardi
ENSGACG00000011852	crnkl1	92	82.096	ENSNLEG00000009862	CRNKL1	99	82.096	Nomascus_leucogenys
ENSGACG00000011852	crnkl1	91	79.708	ENSMEUG00000002361	-	99	79.708	Notamacropus_eugenii
ENSGACG00000011852	crnkl1	89	85.052	ENSMEUG00000012167	-	99	85.052	Notamacropus_eugenii
ENSGACG00000011852	crnkl1	78	58.835	ENSOPRG00000009242	-	61	58.835	Ochotona_princeps
ENSGACG00000011852	crnkl1	91	84.211	ENSODEG00000012175	CRNKL1	99	84.211	Octodon_degus
ENSGACG00000011852	crnkl1	98	86.630	ENSONIG00000018728	crnkl1	99	86.019	Oreochromis_niloticus
ENSGACG00000011852	crnkl1	91	82.849	ENSOCUG00000015484	CRNKL1	83	83.550	Oryctolagus_cuniculus
ENSGACG00000011852	crnkl1	93	88.905	ENSORLG00000017240	crnkl1	96	88.116	Oryzias_latipes
ENSGACG00000011852	crnkl1	93	89.444	ENSORLG00020001742	crnkl1	100	85.298	Oryzias_latipes_hni
ENSGACG00000011852	crnkl1	100	85.809	ENSORLG00015019564	crnkl1	100	85.809	Oryzias_latipes_hsok
ENSGACG00000011852	crnkl1	95	88.873	ENSOMEG00000019895	crnkl1	100	85.333	Oryzias_melastigma
ENSGACG00000011852	crnkl1	91	84.978	ENSOGAG00000011544	CRNKL1	99	84.978	Otolemur_garnettii
ENSGACG00000011852	crnkl1	92	84.470	ENSOARG00000002150	CRNKL1	90	84.582	Ovis_aries
ENSGACG00000011852	crnkl1	91	84.018	ENSPPAG00000027847	CRNKL1	83	84.134	Pan_paniscus
ENSGACG00000011852	crnkl1	91	85.234	ENSPPRG00000001955	CRNKL1	99	85.234	Panthera_pardus
ENSGACG00000011852	crnkl1	91	85.234	ENSPTIG00000007393	CRNKL1	99	85.234	Panthera_tigris_altaica
ENSGACG00000011852	crnkl1	92	84.425	ENSPTRG00000030609	CRNKL1	99	84.425	Pan_troglodytes
ENSGACG00000011852	crnkl1	92	84.279	ENSPANG00000017420	CRNKL1	99	84.279	Papio_anubis
ENSGACG00000011852	crnkl1	89	85.586	ENSPKIG00000017093	crnkl1	98	79.576	Paramormyrops_kingsleyae
ENSGACG00000011852	crnkl1	91	84.604	ENSPSIG00000012705	CRNKL1	99	84.604	Pelodiscus_sinensis
ENSGACG00000011852	crnkl1	91	84.334	ENSPMGG00000006263	crnkl1	96	83.871	Periophthalmus_magnuspinnatus
ENSGACG00000011852	crnkl1	91	84.795	ENSPEMG00000000073	-	99	84.795	Peromyscus_maniculatus_bairdii
ENSGACG00000011852	crnkl1	90	80.917	ENSPMAG00000002250	crnkl1	99	79.450	Petromyzon_marinus
ENSGACG00000011852	crnkl1	89	85.842	ENSPCIG00000025825	CRNKL1	94	85.842	Phascolarctos_cinereus
ENSGACG00000011852	crnkl1	90	91.518	ENSPFOG00000005102	crnkl1	96	87.275	Poecilia_formosa
ENSGACG00000011852	crnkl1	90	91.518	ENSPLAG00000007288	crnkl1	92	87.500	Poecilia_latipinna
ENSGACG00000011852	crnkl1	90	91.667	ENSPMEG00000008865	crnkl1	96	86.999	Poecilia_mexicana
ENSGACG00000011852	crnkl1	89	91.916	ENSPREG00000012615	crnkl1	96	87.414	Poecilia_reticulata
ENSGACG00000011852	crnkl1	91	84.164	ENSPPYG00000010747	CRNKL1	81	84.279	Pongo_abelii
ENSGACG00000011852	crnkl1	90	80.029	ENSPCAG00000003296	CRNKL1	85	80.175	Procavia_capensis
ENSGACG00000011852	crnkl1	91	83.284	ENSPCOG00000017608	CRNKL1	83	83.406	Propithecus_coquereli
ENSGACG00000011852	crnkl1	90	84.978	ENSPVAG00000006207	CRNKL1	83	85.088	Pteropus_vampyrus
ENSGACG00000011852	crnkl1	98	86.066	ENSPNYG00000001977	crnkl1	100	84.868	Pundamilia_nyererei
ENSGACG00000011852	crnkl1	95	86.601	ENSPNAG00000001507	crnkl1	98	85.819	Pygocentrus_nattereri
ENSGACG00000011852	crnkl1	91	84.649	ENSRNOG00000040045	Crnkl1	99	84.649	Rattus_norvegicus
ENSGACG00000011852	crnkl1	91	84.795	ENSRNOG00000010587	Crnkl1	99	84.795	Rattus_norvegicus
ENSGACG00000011852	crnkl1	92	84.279	ENSRBIG00000031770	CRNKL1	99	84.279	Rhinopithecus_bieti
ENSGACG00000011852	crnkl1	92	84.134	ENSRROG00000040450	CRNKL1	99	84.134	Rhinopithecus_roxellana
ENSGACG00000011852	crnkl1	87	37.229	YLR117C	CLF1	99	37.320	Saccharomyces_cerevisiae
ENSGACG00000011852	crnkl1	92	84.571	ENSSBOG00000029672	CRNKL1	99	84.571	Saimiri_boliviensis_boliviensis
ENSGACG00000011852	crnkl1	88	68.835	ENSSHAG00000011199	CRNKL1	99	68.835	Sarcophilus_harrisii
ENSGACG00000011852	crnkl1	89	88.855	ENSSFOG00015000946	crnkl1	99	80.261	Scleropages_formosus
ENSGACG00000011852	crnkl1	98	87.686	ENSSMAG00000007933	crnkl1	93	88.981	Scophthalmus_maximus
ENSGACG00000011852	crnkl1	96	83.194	ENSSDUG00000012625	crnkl1	90	83.194	Seriola_dumerili
ENSGACG00000011852	crnkl1	97	88.583	ENSSLDG00000021413	crnkl1	91	89.444	Seriola_lalandi_dorsalis
ENSGACG00000011852	crnkl1	91	84.211	ENSSARG00000006443	CRNKL1	82	84.211	Sorex_araneus
ENSGACG00000011852	crnkl1	92	84.104	ENSSPUG00000005254	CRNKL1	100	84.104	Sphenodon_punctatus
ENSGACG00000011852	crnkl1	97	89.365	ENSSPAG00000016150	crnkl1	91	89.350	Stegastes_partitus
ENSGACG00000011852	crnkl1	93	84.438	ENSSSCG00000038587	CRNKL1	99	84.438	Sus_scrofa
ENSGACG00000011852	crnkl1	89	85.778	ENSTGUG00000007645	CRNKL1	96	85.778	Taeniopygia_guttata
ENSGACG00000011852	crnkl1	90	85.268	ENSTRUG00000015417	crnkl1	93	81.363	Takifugu_rubripes
ENSGACG00000011852	crnkl1	89	89.552	ENSTNIG00000010710	crnkl1	99	87.338	Tetraodon_nigroviridis
ENSGACG00000011852	crnkl1	83	84.185	ENSTBEG00000001304	CRNKL1	82	84.311	Tupaia_belangeri
ENSGACG00000011852	crnkl1	83	82.109	ENSTTRG00000000484	CRNKL1	81	82.250	Tursiops_truncatus
ENSGACG00000011852	crnkl1	91	85.234	ENSUAMG00000018586	CRNKL1	99	85.234	Ursus_americanus
ENSGACG00000011852	crnkl1	91	85.234	ENSUMAG00000024957	CRNKL1	99	85.234	Ursus_maritimus
ENSGACG00000011852	crnkl1	88	86.707	ENSVVUG00000012559	CRNKL1	82	85.088	Vulpes_vulpes
ENSGACG00000011852	crnkl1	91	87.059	ENSXETG00000009698	crnkl1	99	87.059	Xenopus_tropicalis
ENSGACG00000011852	crnkl1	90	91.518	ENSXCOG00000000824	crnkl1	100	85.411	Xiphophorus_couchianus
ENSGACG00000011852	crnkl1	90	91.518	ENSXMAG00000006896	crnkl1	96	87.172	Xiphophorus_maculatus