EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011903 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4071 bases
Position: chrgroupXVII:14127198-14131268
Accession: ZDB-GENE-040625-176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015751	PolyA_pol	PF01743.20	8.9e-35	1	1
ENSGACP00000015756	PolyA_pol	PF01743.20	1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015787	-	1698	-	ENSGACP00000015756	427 (aa)	-	G3PDT2
ENSGACT00000015782	-	1508	-	ENSGACP00000015751	399 (aa)	-	G3PDS7

Gene Model

Click here to download ENSGACG00000011903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011903	trnt1	99	65.647	ENSG00000072756	TRNT1	96	65.647	Homo_sapiens
ENSGACG00000011903	trnt1	99	84.000	ENSAPOG00000013687	trnt1	99	84.000	Acanthochromis_polyacanthus
ENSGACG00000011903	trnt1	96	67.448	ENSAMEG00000014520	TRNT1	94	66.912	Ailuropoda_melanoleuca
ENSGACG00000011903	trnt1	99	85.681	ENSACIG00000021706	trnt1	99	85.681	Amphilophus_citrinellus
ENSGACG00000011903	trnt1	99	85.681	ENSAOCG00000024612	trnt1	99	85.681	Amphiprion_ocellaris
ENSGACG00000011903	trnt1	96	78.589	ENSAPEG00000022627	trnt1	95	78.589	Amphiprion_percula
ENSGACG00000011903	trnt1	96	88.512	ENSATEG00000008928	trnt1	100	87.129	Anabas_testudineus
ENSGACG00000011903	trnt1	96	68.325	ENSAPLG00000004258	TRNT1	95	68.325	Anas_platyrhynchos
ENSGACG00000011903	trnt1	94	67.647	ENSACAG00000005657	TRNT1	93	65.526	Anolis_carolinensis
ENSGACG00000011903	trnt1	96	67.801	ENSANAG00000024802	TRNT1	94	67.241	Aotus_nancymaae
ENSGACG00000011903	trnt1	99	84.977	ENSACLG00000022227	trnt1	99	84.977	Astatotilapia_calliptera
ENSGACG00000011903	trnt1	99	76.869	ENSAMXG00000003960	trnt1	99	76.869	Astyanax_mexicanus
ENSGACG00000011903	trnt1	96	66.492	ENSBTAG00000019534	TRNT1	94	65.848	Bos_taurus
ENSGACG00000011903	trnt1	95	44.246	WBGene00010089	hpo-31	93	43.796	Caenorhabditis_elegans
ENSGACG00000011903	trnt1	96	68.063	ENSCJAG00000015466	TRNT1	94	67.488	Callithrix_jacchus
ENSGACG00000011903	trnt1	96	68.063	ENSCAFG00000005985	TRNT1	93	67.488	Canis_familiaris
ENSGACG00000011903	trnt1	96	68.063	ENSCAFG00020014746	TRNT1	93	67.488	Canis_lupus_dingo
ENSGACG00000011903	trnt1	96	67.277	ENSCHIG00000007030	TRNT1	93	66.585	Capra_hircus
ENSGACG00000011903	trnt1	96	68.586	ENSTSYG00000013390	TRNT1	94	67.980	Carlito_syrichta
ENSGACG00000011903	trnt1	94	53.581	ENSCAPG00000006891	TRNT1	99	53.581	Cavia_aperea
ENSGACG00000011903	trnt1	99	64.706	ENSCPOG00000007849	TRNT1	98	64.706	Cavia_porcellus
ENSGACG00000011903	trnt1	99	66.751	ENSCCAG00000002919	TRNT1	98	66.921	Cebus_capucinus
ENSGACG00000011903	trnt1	97	68.041	ENSCATG00000031985	TRNT1	92	68.227	Cercocebus_atys
ENSGACG00000011903	trnt1	99	64.471	ENSCLAG00000005186	TRNT1	92	73.980	Chinchilla_lanigera
ENSGACG00000011903	trnt1	97	68.041	ENSCSAG00000011052	TRNT1	94	68.227	Chlorocebus_sabaeus
ENSGACG00000011903	trnt1	79	82.237	ENSCHOG00000005712	TRNT1	78	79.545	Choloepus_hoffmanni
ENSGACG00000011903	trnt1	96	68.586	ENSCPBG00000017636	TRNT1	93	67.892	Chrysemys_picta_bellii
ENSGACG00000011903	trnt1	96	42.228	ENSCING00000007069	-	99	41.278	Ciona_intestinalis
ENSGACG00000011903	trnt1	96	41.667	ENSCSAVG00000007494	-	95	40.842	Ciona_savignyi
ENSGACG00000011903	trnt1	97	68.299	ENSCANG00000039030	TRNT1	94	68.473	Colobus_angolensis_palliatus
ENSGACG00000011903	trnt1	96	67.801	ENSCGRG00001009998	Trnt1	94	67.402	Cricetulus_griseus_chok1gshd
ENSGACG00000011903	trnt1	96	67.801	ENSCGRG00000013410	Trnt1	86	79.121	Cricetulus_griseus_crigri
ENSGACG00000011903	trnt1	99	81.690	ENSCSEG00000008157	trnt1	99	81.690	Cynoglossus_semilaevis
ENSGACG00000011903	trnt1	96	86.387	ENSCVAG00000019770	trnt1	99	83.099	Cyprinodon_variegatus
ENSGACG00000011903	trnt1	99	76.636	ENSDARG00000075297	trnt1	99	76.636	Danio_rerio
ENSGACG00000011903	trnt1	96	69.895	ENSDNOG00000008837	TRNT1	94	69.118	Dasypus_novemcinctus
ENSGACG00000011903	trnt1	96	68.063	ENSDORG00000014035	Trnt1	94	67.157	Dipodomys_ordii
ENSGACG00000011903	trnt1	96	49.614	FBgn0037369	CG2100	84	49.265	Drosophila_melanogaster
ENSGACG00000011903	trnt1	54	76.959	ENSETEG00000018177	TRNT1	97	74.274	Echinops_telfairi
ENSGACG00000011903	trnt1	99	59.529	ENSEBUG00000012779	-	99	59.529	Eptatretus_burgeri
ENSGACG00000011903	trnt1	99	66.353	ENSEASG00005003577	TRNT1	98	66.353	Equus_asinus_asinus
ENSGACG00000011903	trnt1	99	66.588	ENSECAG00000014420	TRNT1	98	66.588	Equus_caballus
ENSGACG00000011903	trnt1	99	66.589	ENSEEUG00000009567	TRNT1	97	66.589	Erinaceus_europaeus
ENSGACG00000011903	trnt1	99	78.923	ENSELUG00000003802	trnt1	99	78.923	Esox_lucius
ENSGACG00000011903	trnt1	96	68.586	ENSFCAG00000026805	TRNT1	93	67.980	Felis_catus
ENSGACG00000011903	trnt1	96	68.325	ENSFALG00000013539	TRNT1	99	68.325	Ficedula_albicollis
ENSGACG00000011903	trnt1	96	67.801	ENSFDAG00000018412	TRNT1	94	67.241	Fukomys_damarensis
ENSGACG00000011903	trnt1	99	84.038	ENSFHEG00000019294	trnt1	99	84.038	Fundulus_heteroclitus
ENSGACG00000011903	trnt1	96	83.246	ENSGMOG00000007460	trnt1	100	80.047	Gadus_morhua
ENSGACG00000011903	trnt1	96	67.016	ENSGALG00000017368	TRNT1	99	62.791	Gallus_gallus
ENSGACG00000011903	trnt1	99	82.864	ENSGAFG00000008647	trnt1	99	82.864	Gambusia_affinis
ENSGACG00000011903	trnt1	96	69.372	ENSGAGG00000020942	TRNT1	93	68.627	Gopherus_agassizii
ENSGACG00000011903	trnt1	99	65.647	ENSGGOG00000015286	TRNT1	98	65.647	Gorilla_gorilla
ENSGACG00000011903	trnt1	99	85.211	ENSHBUG00000002797	trnt1	99	85.211	Haplochromis_burtoni
ENSGACG00000011903	trnt1	99	64.471	ENSHGLG00000003649	TRNT1	98	64.471	Heterocephalus_glaber_female
ENSGACG00000011903	trnt1	96	62.924	ENSHGLG00000000221	-	94	62.162	Heterocephalus_glaber_female
ENSGACG00000011903	trnt1	99	63.294	ENSHGLG00100016421	TRNT1	98	63.294	Heterocephalus_glaber_male
ENSGACG00000011903	trnt1	100	78.220	ENSHCOG00000010618	trnt1	100	78.220	Hippocampus_comes
ENSGACG00000011903	trnt1	99	77.570	ENSIPUG00000000971	trnt1	99	77.570	Ictalurus_punctatus
ENSGACG00000011903	trnt1	99	66.047	ENSSTOG00000000150	TRNT1	97	74.129	Ictidomys_tridecemlineatus
ENSGACG00000011903	trnt1	97	67.526	ENSJJAG00000018561	Trnt1	98	65.258	Jaculus_jaculus
ENSGACG00000011903	trnt1	99	83.803	ENSKMAG00000011307	trnt1	99	83.803	Kryptolebias_marmoratus
ENSGACG00000011903	trnt1	96	78.589	ENSLBEG00000019457	trnt1	97	78.589	Labrus_bergylta
ENSGACG00000011903	trnt1	95	70.604	ENSLACG00000013227	TRNT1	94	70.025	Latimeria_chalumnae
ENSGACG00000011903	trnt1	96	74.869	ENSLOCG00000011105	trnt1	98	71.795	Lepisosteus_oculatus
ENSGACG00000011903	trnt1	96	69.110	ENSLAFG00000023191	TRNT1	99	65.814	Loxodonta_africana
ENSGACG00000011903	trnt1	97	68.041	ENSMFAG00000045113	TRNT1	92	68.227	Macaca_fascicularis
ENSGACG00000011903	trnt1	97	68.041	ENSMMUG00000017983	TRNT1	92	68.227	Macaca_mulatta
ENSGACG00000011903	trnt1	97	68.041	ENSMNEG00000037805	TRNT1	92	68.227	Macaca_nemestrina
ENSGACG00000011903	trnt1	96	68.668	ENSMLEG00000033671	TRNT1	100	68.668	Mandrillus_leucophaeus
ENSGACG00000011903	trnt1	99	84.977	ENSMAMG00000023401	trnt1	99	84.977	Mastacembelus_armatus
ENSGACG00000011903	trnt1	99	84.977	ENSMZEG00005009141	trnt1	99	84.977	Maylandia_zebra
ENSGACG00000011903	trnt1	80	64.263	ENSMGAG00000009971	TRNT1	99	64.263	Meleagris_gallopavo
ENSGACG00000011903	trnt1	99	64.884	ENSMAUG00000020707	Trnt1	99	64.884	Mesocricetus_auratus
ENSGACG00000011903	trnt1	99	66.588	ENSMICG00000016615	TRNT1	96	66.588	Microcebus_murinus
ENSGACG00000011903	trnt1	96	68.325	ENSMOCG00000004539	Trnt1	94	67.647	Microtus_ochrogaster
ENSGACG00000011903	trnt1	100	84.778	ENSMMOG00000010742	trnt1	100	84.778	Mola_mola
ENSGACG00000011903	trnt1	99	64.235	ENSMODG00000004368	TRNT1	96	64.235	Monodelphis_domestica
ENSGACG00000011903	trnt1	99	81.221	ENSMALG00000008376	trnt1	99	81.221	Monopterus_albus
ENSGACG00000011903	trnt1	96	68.325	MGP_CAROLIEiJ_G0028698	Trnt1	90	74.590	Mus_caroli
ENSGACG00000011903	trnt1	96	68.063	ENSMUSG00000013736	Trnt1	83	80.447	Mus_musculus
ENSGACG00000011903	trnt1	96	68.586	MGP_PahariEiJ_G0022449	Trnt1	88	81.564	Mus_pahari
ENSGACG00000011903	trnt1	96	68.325	MGP_SPRETEiJ_G0029726	Trnt1	83	80.447	Mus_spretus
ENSGACG00000011903	trnt1	96	67.801	ENSMPUG00000017017	TRNT1	93	67.241	Mustela_putorius_furo
ENSGACG00000011903	trnt1	96	68.586	ENSMLUG00000011864	TRNT1	99	68.586	Myotis_lucifugus
ENSGACG00000011903	trnt1	96	68.063	ENSNGAG00000000537	Trnt1	94	67.402	Nannospalax_galili
ENSGACG00000011903	trnt1	81	85.549	ENSNBRG00000023606	trnt1	99	85.549	Neolamprologus_brichardi
ENSGACG00000011903	trnt1	96	68.848	ENSNLEG00000003226	TRNT1	94	68.227	Nomascus_leucogenys
ENSGACG00000011903	trnt1	99	64.471	ENSMEUG00000004684	TRNT1	96	64.471	Notamacropus_eugenii
ENSGACG00000011903	trnt1	96	65.183	ENSOPRG00000015067	TRNT1	99	65.183	Ochotona_princeps
ENSGACG00000011903	trnt1	99	65.176	ENSODEG00000007597	TRNT1	98	65.176	Octodon_degus
ENSGACG00000011903	trnt1	99	86.385	ENSONIG00000020273	trnt1	98	86.385	Oreochromis_niloticus
ENSGACG00000011903	trnt1	96	65.707	ENSOANG00000007514	TRNT1	98	62.648	Ornithorhynchus_anatinus
ENSGACG00000011903	trnt1	99	64.941	ENSOCUG00000008580	TRNT1	99	64.941	Oryctolagus_cuniculus
ENSGACG00000011903	trnt1	96	81.201	ENSORLG00000003165	trnt1	98	79.177	Oryzias_latipes
ENSGACG00000011903	trnt1	96	81.462	ENSORLG00020022060	trnt1	98	79.419	Oryzias_latipes_hni
ENSGACG00000011903	trnt1	96	81.462	ENSORLG00015018915	trnt1	97	79.419	Oryzias_latipes_hsok
ENSGACG00000011903	trnt1	96	79.581	ENSOMEG00000003331	trnt1	99	75.822	Oryzias_melastigma
ENSGACG00000011903	trnt1	96	67.277	ENSOARG00000008631	TRNT1	93	66.585	Ovis_aries
ENSGACG00000011903	trnt1	99	65.412	ENSPPAG00000043566	TRNT1	98	65.412	Pan_paniscus
ENSGACG00000011903	trnt1	96	68.586	ENSPPRG00000001327	TRNT1	93	67.980	Panthera_pardus
ENSGACG00000011903	trnt1	96	68.586	ENSPTIG00000011448	TRNT1	93	67.980	Panthera_tigris_altaica
ENSGACG00000011903	trnt1	99	65.412	ENSPTRG00000014564	TRNT1	98	65.412	Pan_troglodytes
ENSGACG00000011903	trnt1	97	68.041	ENSPANG00000025944	TRNT1	92	68.227	Papio_anubis
ENSGACG00000011903	trnt1	99	73.364	ENSPKIG00000020015	trnt1	99	73.364	Paramormyrops_kingsleyae
ENSGACG00000011903	trnt1	96	69.895	ENSPSIG00000017356	TRNT1	99	69.359	Pelodiscus_sinensis
ENSGACG00000011903	trnt1	100	79.391	ENSPMGG00000008888	trnt1	99	79.391	Periophthalmus_magnuspinnatus
ENSGACG00000011903	trnt1	99	65.116	ENSPEMG00000019845	Trnt1	99	65.116	Peromyscus_maniculatus_bairdii
ENSGACG00000011903	trnt1	97	66.753	ENSPCIG00000030436	TRNT1	95	66.102	Phascolarctos_cinereus
ENSGACG00000011903	trnt1	99	82.506	ENSPFOG00000006194	trnt1	99	82.506	Poecilia_formosa
ENSGACG00000011903	trnt1	99	82.506	ENSPLAG00000015623	trnt1	99	83.871	Poecilia_latipinna
ENSGACG00000011903	trnt1	99	82.629	ENSPMEG00000012216	trnt1	99	83.871	Poecilia_mexicana
ENSGACG00000011903	trnt1	99	82.629	ENSPREG00000021470	trnt1	99	82.629	Poecilia_reticulata
ENSGACG00000011903	trnt1	96	68.063	ENSPPYG00000013702	TRNT1	94	67.402	Pongo_abelii
ENSGACG00000011903	trnt1	96	69.895	ENSPCAG00000001951	TRNT1	99	69.895	Procavia_capensis
ENSGACG00000011903	trnt1	99	65.882	ENSPCOG00000022228	TRNT1	98	65.882	Propithecus_coquereli
ENSGACG00000011903	trnt1	96	68.063	ENSPVAG00000008784	TRNT1	99	68.063	Pteropus_vampyrus
ENSGACG00000011903	trnt1	99	84.742	ENSPNYG00000003120	trnt1	99	84.742	Pundamilia_nyererei
ENSGACG00000011903	trnt1	99	78.037	ENSPNAG00000000565	trnt1	99	78.037	Pygocentrus_nattereri
ENSGACG00000011903	trnt1	96	68.848	ENSRNOG00000006432	Trnt1	94	68.137	Rattus_norvegicus
ENSGACG00000011903	trnt1	97	67.268	ENSRBIG00000042632	TRNT1	93	67.488	Rhinopithecus_bieti
ENSGACG00000011903	trnt1	97	68.041	ENSRROG00000036866	TRNT1	94	68.227	Rhinopithecus_roxellana
ENSGACG00000011903	trnt1	96	68.063	ENSSBOG00000021208	TRNT1	94	67.488	Saimiri_boliviensis_boliviensis
ENSGACG00000011903	trnt1	97	66.495	ENSSHAG00000018861	TRNT1	95	65.700	Sarcophilus_harrisii
ENSGACG00000011903	trnt1	99	72.600	ENSSFOG00015020844	trnt1	99	72.261	Scleropages_formosus
ENSGACG00000011903	trnt1	99	84.507	ENSSMAG00000015432	trnt1	98	84.507	Scophthalmus_maximus
ENSGACG00000011903	trnt1	99	87.324	ENSSDUG00000012320	trnt1	100	87.324	Seriola_dumerili
ENSGACG00000011903	trnt1	99	86.854	ENSSLDG00000009325	trnt1	100	86.854	Seriola_lalandi_dorsalis
ENSGACG00000011903	trnt1	60	87.448	ENSSLDG00000016463	-	91	87.448	Seriola_lalandi_dorsalis
ENSGACG00000011903	trnt1	96	69.372	ENSSPUG00000014153	TRNT1	99	69.372	Sphenodon_punctatus
ENSGACG00000011903	trnt1	99	84.038	ENSSPAG00000021005	trnt1	99	84.038	Stegastes_partitus
ENSGACG00000011903	trnt1	96	68.586	ENSSSCG00000011529	TRNT1	94	67.980	Sus_scrofa
ENSGACG00000011903	trnt1	96	68.325	ENSTGUG00000010192	TRNT1	99	66.832	Taeniopygia_guttata
ENSGACG00000011903	trnt1	100	81.967	ENSTRUG00000001088	trnt1	100	81.967	Takifugu_rubripes
ENSGACG00000011903	trnt1	100	80.796	ENSTNIG00000007363	trnt1	98	80.796	Tetraodon_nigroviridis
ENSGACG00000011903	trnt1	61	58.555	ENSTBEG00000006367	TRNT1	86	58.555	Tupaia_belangeri
ENSGACG00000011903	trnt1	99	64.471	ENSTTRG00000007803	TRNT1	96	64.471	Tursiops_truncatus
ENSGACG00000011903	trnt1	99	64.941	ENSUAMG00000022574	TRNT1	97	64.941	Ursus_americanus
ENSGACG00000011903	trnt1	99	64.941	ENSUMAG00000024092	TRNT1	97	64.941	Ursus_maritimus
ENSGACG00000011903	trnt1	96	68.063	ENSVVUG00000012810	TRNT1	93	67.488	Vulpes_vulpes
ENSGACG00000011903	trnt1	99	62.217	ENSXETG00000025091	trnt1	99	61.692	Xenopus_tropicalis
ENSGACG00000011903	trnt1	99	81.455	ENSXCOG00000010150	trnt1	99	81.455	Xiphophorus_couchianus
ENSGACG00000011903	trnt1	99	82.160	ENSXMAG00000002227	trnt1	99	82.160	Xiphophorus_maculatus