EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000011935 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3310 bases
Position: chrgroupXVIII:12659540-12662849
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015797	RNase_H	PF00075.24	2e-42	1	1
ENSGACP00000015808	RNase_H	PF00075.24	2.2e-42	1	1
ENSGACP00000015792	RNase_H	PF00075.24	2.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015828	-	1354	-	ENSGACP00000015797	296 (aa)	-	G3PDX3
ENSGACT00000015823	-	1402	-	ENSGACP00000015792	298 (aa)	-	G3PDW8
ENSGACT00000015839	-	1323	-	ENSGACP00000015808	295 (aa)	-	G3PDY4

Gene Model

Click here to download ENSGACG00000011935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011935	rnaseh1	88	56.226	ENSG00000171865	RNASEH1	89	56.226	Homo_sapiens
ENSGACG00000011935	rnaseh1	99	77.104	ENSAPOG00000000412	rnaseh1	98	77.104	Acanthochromis_polyacanthus
ENSGACG00000011935	rnaseh1	88	54.340	ENSAMEG00000018433	RNASEH1	95	51.957	Ailuropoda_melanoleuca
ENSGACG00000011935	rnaseh1	98	80.887	ENSACIG00000014666	rnaseh1	96	80.887	Amphilophus_citrinellus
ENSGACG00000011935	rnaseh1	98	80.205	ENSAOCG00000015210	rnaseh1	97	80.205	Amphiprion_ocellaris
ENSGACG00000011935	rnaseh1	98	80.205	ENSAPEG00000014104	rnaseh1	97	80.205	Amphiprion_percula
ENSGACG00000011935	rnaseh1	98	80.546	ENSATEG00000000598	rnaseh1	96	81.111	Anabas_testudineus
ENSGACG00000011935	rnaseh1	85	54.826	ENSAPLG00000001961	RNASEH1	100	54.826	Anas_platyrhynchos
ENSGACG00000011935	rnaseh1	89	47.797	ENSACAG00000016857	rnaseh1	91	47.797	Anolis_carolinensis
ENSGACG00000011935	rnaseh1	98	53.584	ENSANAG00000024055	RNASEH1	98	53.584	Aotus_nancymaae
ENSGACG00000011935	rnaseh1	98	80.537	ENSACLG00000006741	rnaseh1	96	81.208	Astatotilapia_calliptera
ENSGACG00000011935	rnaseh1	98	55.932	ENSAMXG00000042940	rnaseh1	97	59.636	Astyanax_mexicanus
ENSGACG00000011935	rnaseh1	99	54.237	ENSBTAG00000016235	RNASEH1	99	54.237	Bos_taurus
ENSGACG00000011935	rnaseh1	92	38.235	WBGene00004382	rnh-1.0	100	38.235	Caenorhabditis_elegans
ENSGACG00000011935	rnaseh1	98	52.203	ENSCJAG00000035450	RNASEH1	98	52.203	Callithrix_jacchus
ENSGACG00000011935	rnaseh1	98	52.740	ENSCAFG00000003259	RNASEH1	98	52.740	Canis_familiaris
ENSGACG00000011935	rnaseh1	51	64.238	ENSCAFG00020004994	RNASEH1	97	64.238	Canis_lupus_dingo
ENSGACG00000011935	rnaseh1	81	44.082	ENSCHIG00000022230	-	99	44.082	Capra_hircus
ENSGACG00000011935	rnaseh1	98	53.767	ENSCHIG00000022264	-	98	53.767	Capra_hircus
ENSGACG00000011935	rnaseh1	98	51.839	ENSTSYG00000012926	RNASEH1	98	51.839	Carlito_syrichta
ENSGACG00000011935	rnaseh1	83	53.815	ENSCAPG00000004813	RNASEH1	98	54.251	Cavia_aperea
ENSGACG00000011935	rnaseh1	88	53.788	ENSCPOG00000022278	Rnaseh1	86	53.788	Cavia_porcellus
ENSGACG00000011935	rnaseh1	98	52.542	ENSCCAG00000038017	RNASEH1	98	52.542	Cebus_capucinus
ENSGACG00000011935	rnaseh1	89	50.943	ENSCATG00000016818	-	89	51.724	Cercocebus_atys
ENSGACG00000011935	rnaseh1	88	56.061	ENSCATG00000016515	-	89	56.061	Cercocebus_atys
ENSGACG00000011935	rnaseh1	88	54.924	ENSCLAG00000002440	RNASEH1	89	54.924	Chinchilla_lanigera
ENSGACG00000011935	rnaseh1	88	55.725	ENSCSAG00000006943	RNASEH1	89	55.725	Chlorocebus_sabaeus
ENSGACG00000011935	rnaseh1	59	61.364	ENSCHOG00000008547	RNASEH1	87	61.364	Choloepus_hoffmanni
ENSGACG00000011935	rnaseh1	92	53.237	ENSCPBG00000021620	RNASEH1	99	54.444	Chrysemys_picta_bellii
ENSGACG00000011935	rnaseh1	89	38.768	ENSCING00000014054	-	92	38.768	Ciona_intestinalis
ENSGACG00000011935	rnaseh1	75	38.428	ENSCSAVG00000000009	-	96	38.428	Ciona_savignyi
ENSGACG00000011935	rnaseh1	88	55.725	ENSCANG00000037763	RNASEH1	89	55.725	Colobus_angolensis_palliatus
ENSGACG00000011935	rnaseh1	98	51.342	ENSCGRG00001008950	Rnaseh1	97	51.211	Cricetulus_griseus_chok1gshd
ENSGACG00000011935	rnaseh1	98	51.342	ENSCGRG00000006029	Rnaseh1	97	51.211	Cricetulus_griseus_crigri
ENSGACG00000011935	rnaseh1	98	67.224	ENSCSEG00000005741	rnaseh1	95	68.364	Cynoglossus_semilaevis
ENSGACG00000011935	rnaseh1	95	75.265	ENSCVAG00000018717	rnaseh1	94	75.265	Cyprinodon_variegatus
ENSGACG00000011935	rnaseh1	90	68.978	ENSDARG00000042571	rnaseh1	98	68.978	Danio_rerio
ENSGACG00000011935	rnaseh1	98	52.759	ENSDNOG00000016056	RNASEH1	99	51.852	Dasypus_novemcinctus
ENSGACG00000011935	rnaseh1	89	51.673	ENSDORG00000000704	Rnaseh1	90	51.673	Dipodomys_ordii
ENSGACG00000011935	rnaseh1	90	38.047	FBgn0023171	rnh1	94	38.047	Drosophila_melanogaster
ENSGACG00000011935	rnaseh1	98	49.662	ENSETEG00000012674	RNASEH1	99	49.662	Echinops_telfairi
ENSGACG00000011935	rnaseh1	88	42.481	ENSEBUG00000006116	rnaseh1	78	42.481	Eptatretus_burgeri
ENSGACG00000011935	rnaseh1	89	44.637	ENSEBUG00000008898	rnaseh1	98	44.637	Eptatretus_burgeri
ENSGACG00000011935	rnaseh1	99	53.356	ENSEASG00005022200	RNASEH1	99	53.356	Equus_asinus_asinus
ENSGACG00000011935	rnaseh1	99	53.356	ENSECAG00000020695	RNASEH1	99	53.356	Equus_caballus
ENSGACG00000011935	rnaseh1	99	71.192	ENSELUG00000010112	rnaseh1	99	71.192	Esox_lucius
ENSGACG00000011935	rnaseh1	98	54.138	ENSFCAG00000025832	RNASEH1	98	54.138	Felis_catus
ENSGACG00000011935	rnaseh1	90	56.318	ENSFALG00000002069	RNASEH1	93	57.040	Ficedula_albicollis
ENSGACG00000011935	rnaseh1	98	52.740	ENSFDAG00000002035	RNASEH1	87	52.740	Fukomys_damarensis
ENSGACG00000011935	rnaseh1	99	71.572	ENSGMOG00000013818	rnaseh1	100	71.572	Gadus_morhua
ENSGACG00000011935	rnaseh1	90	56.777	ENSGALG00000016389	RNASEH1	93	56.777	Gallus_gallus
ENSGACG00000011935	rnaseh1	99	69.932	ENSGAFG00000001776	rnaseh1	99	69.932	Gambusia_affinis
ENSGACG00000011935	rnaseh1	89	55.882	ENSGAGG00000009150	RNASEH1	62	56.618	Gopherus_agassizii
ENSGACG00000011935	rnaseh1	88	56.226	ENSGGOG00000034822	RNASEH1	89	56.226	Gorilla_gorilla
ENSGACG00000011935	rnaseh1	98	79.866	ENSHBUG00000004666	rnaseh1	96	80.537	Haplochromis_burtoni
ENSGACG00000011935	rnaseh1	88	53.640	ENSHGLG00000002585	Rnaseh1	82	53.640	Heterocephalus_glaber_female
ENSGACG00000011935	rnaseh1	88	53.640	ENSHGLG00100005105	Rnaseh1	82	53.640	Heterocephalus_glaber_male
ENSGACG00000011935	rnaseh1	98	73.754	ENSHCOG00000012329	rnaseh1	98	73.422	Hippocampus_comes
ENSGACG00000011935	rnaseh1	98	59.589	ENSIPUG00000023060	rnaseh1	98	61.654	Ictalurus_punctatus
ENSGACG00000011935	rnaseh1	88	54.962	ENSSTOG00000012774	RNASEH1	91	54.962	Ictidomys_tridecemlineatus
ENSGACG00000011935	rnaseh1	95	48.070	ENSJJAG00000021481	-	94	48.070	Jaculus_jaculus
ENSGACG00000011935	rnaseh1	87	43.462	ENSJJAG00000008994	-	89	43.462	Jaculus_jaculus
ENSGACG00000011935	rnaseh1	87	50.000	ENSJJAG00000020238	Rnaseh1	94	50.000	Jaculus_jaculus
ENSGACG00000011935	rnaseh1	97	73.611	ENSKMAG00000001373	rnaseh1	95	73.611	Kryptolebias_marmoratus
ENSGACG00000011935	rnaseh1	98	78.201	ENSLBEG00000004480	rnaseh1	97	80.443	Labrus_bergylta
ENSGACG00000011935	rnaseh1	91	54.839	ENSLACG00000007100	RNASEH1	90	55.357	Latimeria_chalumnae
ENSGACG00000011935	rnaseh1	91	61.232	ENSLOCG00000017212	rnaseh1	99	61.594	Lepisosteus_oculatus
ENSGACG00000011935	rnaseh1	88	56.489	ENSLAFG00000015091	RNASEH1	89	56.489	Loxodonta_africana
ENSGACG00000011935	rnaseh1	88	52.107	ENSMFAG00000002323	-	89	52.107	Macaca_fascicularis
ENSGACG00000011935	rnaseh1	88	56.226	ENSMFAG00000000063	-	89	56.226	Macaca_fascicularis
ENSGACG00000011935	rnaseh1	89	51.331	ENSMMUG00000019280	-	90	51.331	Macaca_mulatta
ENSGACG00000011935	rnaseh1	88	52.107	ENSMNEG00000029676	-	89	52.107	Macaca_nemestrina
ENSGACG00000011935	rnaseh1	88	56.604	ENSMNEG00000040183	-	89	56.604	Macaca_nemestrina
ENSGACG00000011935	rnaseh1	83	55.823	ENSMLEG00000039352	-	99	55.823	Mandrillus_leucophaeus
ENSGACG00000011935	rnaseh1	89	53.232	ENSMLEG00000028662	-	90	53.232	Mandrillus_leucophaeus
ENSGACG00000011935	rnaseh1	98	76.871	ENSMAMG00000019725	rnaseh1	95	78.598	Mastacembelus_armatus
ENSGACG00000011935	rnaseh1	98	80.537	ENSMZEG00005013006	rnaseh1	96	81.208	Maylandia_zebra
ENSGACG00000011935	rnaseh1	80	56.504	ENSMGAG00000013979	RNASEH1	99	56.504	Meleagris_gallopavo
ENSGACG00000011935	rnaseh1	97	51.736	ENSMAUG00000014957	Rnaseh1	96	51.736	Mesocricetus_auratus
ENSGACG00000011935	rnaseh1	98	53.425	ENSMICG00000033156	RNASEH1	97	53.425	Microcebus_murinus
ENSGACG00000011935	rnaseh1	98	51.186	ENSMOCG00000015522	Rnaseh1	97	51.186	Microtus_ochrogaster
ENSGACG00000011935	rnaseh1	98	77.055	ENSMMOG00000015902	rnaseh1	96	77.055	Mola_mola
ENSGACG00000011935	rnaseh1	83	48.178	ENSMODG00000028814	-	96	49.004	Monodelphis_domestica
ENSGACG00000011935	rnaseh1	89	55.472	ENSMODG00000014491	-	89	55.472	Monodelphis_domestica
ENSGACG00000011935	rnaseh1	98	78.840	ENSMALG00000010565	rnaseh1	97	78.840	Monopterus_albus
ENSGACG00000011935	rnaseh1	97	52.249	MGP_CAROLIEiJ_G0017660	Rnaseh1	96	52.249	Mus_caroli
ENSGACG00000011935	rnaseh1	97	52.595	ENSMUSG00000020630	Rnaseh1	96	52.595	Mus_musculus
ENSGACG00000011935	rnaseh1	98	52.041	MGP_PahariEiJ_G0029418	Rnaseh1	98	52.721	Mus_pahari
ENSGACG00000011935	rnaseh1	97	53.287	MGP_SPRETEiJ_G0018502	Rnaseh1	96	53.287	Mus_spretus
ENSGACG00000011935	rnaseh1	61	57.065	ENSMPUG00000012984	RNASEH1	89	57.065	Mustela_putorius_furo
ENSGACG00000011935	rnaseh1	88	54.962	ENSNGAG00000015966	Rnaseh1	84	54.962	Nannospalax_galili
ENSGACG00000011935	rnaseh1	98	80.201	ENSNBRG00000008739	rnaseh1	96	80.872	Neolamprologus_brichardi
ENSGACG00000011935	rnaseh1	88	49.237	ENSNLEG00000015400	RNASEH1	87	49.237	Nomascus_leucogenys
ENSGACG00000011935	rnaseh1	81	50.207	ENSNLEG00000000059	-	88	50.207	Nomascus_leucogenys
ENSGACG00000011935	rnaseh1	65	44.560	ENSMEUG00000003610	-	65	44.560	Notamacropus_eugenii
ENSGACG00000011935	rnaseh1	90	55.056	ENSOPRG00000005072	RNASEH1	90	55.056	Ochotona_princeps
ENSGACG00000011935	rnaseh1	94	53.147	ENSODEG00000000235	Rnaseh1	93	53.147	Octodon_degus
ENSGACG00000011935	rnaseh1	91	81.455	ENSONIG00000018697	rnaseh1	99	81.455	Oreochromis_niloticus
ENSGACG00000011935	rnaseh1	88	53.817	ENSOCUG00000006117	RNASEH1	89	53.435	Oryctolagus_cuniculus
ENSGACG00000011935	rnaseh1	91	72.694	ENSORLG00000018127	rnaseh1	96	72.694	Oryzias_latipes
ENSGACG00000011935	rnaseh1	98	70.847	ENSORLG00020013660	rnaseh1	97	71.380	Oryzias_latipes_hni
ENSGACG00000011935	rnaseh1	98	70.847	ENSORLG00015011338	rnaseh1	97	70.847	Oryzias_latipes_hsok
ENSGACG00000011935	rnaseh1	90	70.301	ENSOMEG00000004710	rnaseh1	99	70.301	Oryzias_melastigma
ENSGACG00000011935	rnaseh1	98	52.759	ENSOGAG00000017176	RNASEH1	98	52.759	Otolemur_garnettii
ENSGACG00000011935	rnaseh1	98	46.823	ENSOARG00000005386	RNASEH1	98	46.823	Ovis_aries
ENSGACG00000011935	rnaseh1	88	56.226	ENSPPAG00000034221	RNASEH1	89	56.226	Pan_paniscus
ENSGACG00000011935	rnaseh1	98	53.793	ENSPPRG00000015513	RNASEH1	98	53.793	Panthera_pardus
ENSGACG00000011935	rnaseh1	82	56.148	ENSPTIG00000019034	RNASEH1	83	56.148	Panthera_tigris_altaica
ENSGACG00000011935	rnaseh1	82	49.600	ENSPTRG00000043403	-	91	49.600	Pan_troglodytes
ENSGACG00000011935	rnaseh1	88	56.226	ENSPTRG00000011614	RNASEH1	89	56.226	Pan_troglodytes
ENSGACG00000011935	rnaseh1	88	56.107	ENSPANG00000000443	RNASEH1	97	56.504	Papio_anubis
ENSGACG00000011935	rnaseh1	89	50.951	ENSPANG00000018246	-	89	50.951	Papio_anubis
ENSGACG00000011935	rnaseh1	91	61.852	ENSPKIG00000003146	rnaseh1	100	61.871	Paramormyrops_kingsleyae
ENSGACG00000011935	rnaseh1	89	55.147	ENSPSIG00000002937	RNASEH1	99	54.412	Pelodiscus_sinensis
ENSGACG00000011935	rnaseh1	98	61.806	ENSPMGG00000017463	rnaseh1	99	61.806	Periophthalmus_magnuspinnatus
ENSGACG00000011935	rnaseh1	97	51.042	ENSPEMG00000022465	-	96	51.557	Peromyscus_maniculatus_bairdii
ENSGACG00000011935	rnaseh1	55	35.976	ENSPCIG00000026047	-	92	35.976	Phascolarctos_cinereus
ENSGACG00000011935	rnaseh1	89	52.652	ENSPCIG00000023334	-	89	52.652	Phascolarctos_cinereus
ENSGACG00000011935	rnaseh1	97	70.169	ENSPFOG00000002841	rnaseh1	100	70.169	Poecilia_formosa
ENSGACG00000011935	rnaseh1	64	61.538	ENSPLAG00000021349	-	77	61.538	Poecilia_latipinna
ENSGACG00000011935	rnaseh1	99	69.257	ENSPMEG00000016826	rnaseh1	100	69.257	Poecilia_mexicana
ENSGACG00000011935	rnaseh1	99	68.543	ENSPREG00000012197	rnaseh1	100	68.543	Poecilia_reticulata
ENSGACG00000011935	rnaseh1	81	50.612	ENSPPYG00000008067	-	90	50.612	Pongo_abelii
ENSGACG00000011935	rnaseh1	88	46.415	ENSPPYG00000025873	RNASEH1	88	46.415	Pongo_abelii
ENSGACG00000011935	rnaseh1	90	54.478	ENSPCAG00000002500	RNASEH1	90	54.478	Procavia_capensis
ENSGACG00000011935	rnaseh1	98	47.945	ENSPCOG00000019444	RNASEH1	98	47.945	Propithecus_coquereli
ENSGACG00000011935	rnaseh1	98	51.525	ENSPVAG00000002070	RNASEH1	98	51.525	Pteropus_vampyrus
ENSGACG00000011935	rnaseh1	98	79.866	ENSPNYG00000001292	rnaseh1	96	80.537	Pundamilia_nyererei
ENSGACG00000011935	rnaseh1	98	64.238	ENSPNAG00000022344	rnaseh1	99	64.238	Pygocentrus_nattereri
ENSGACG00000011935	rnaseh1	98	52.721	ENSRNOG00000008584	Rnaseh1	98	53.061	Rattus_norvegicus
ENSGACG00000011935	rnaseh1	91	54.275	ENSRBIG00000034222	RNASEH1	91	54.275	Rhinopithecus_bieti
ENSGACG00000011935	rnaseh1	91	54.647	ENSRROG00000041761	RNASEH1	91	54.647	Rhinopithecus_roxellana
ENSGACG00000011935	rnaseh1	91	46.000	YMR234W	-	87	46.000	Saccharomyces_cerevisiae
ENSGACG00000011935	rnaseh1	98	52.203	ENSSBOG00000025411	RNASEH1	98	52.203	Saimiri_boliviensis_boliviensis
ENSGACG00000011935	rnaseh1	98	52.381	ENSSHAG00000013051	RNASEH1	97	52.381	Sarcophilus_harrisii
ENSGACG00000011935	rnaseh1	98	59.524	ENSSFOG00015002709	rnaseh1	99	60.481	Scleropages_formosus
ENSGACG00000011935	rnaseh1	98	80.952	ENSSMAG00000007586	rnaseh1	96	80.952	Scophthalmus_maximus
ENSGACG00000011935	rnaseh1	96	83.275	ENSSDUG00000008217	rnaseh1	95	84.758	Seriola_dumerili
ENSGACG00000011935	rnaseh1	84	80.876	ENSSLDG00000000442	rnaseh1	94	81.855	Seriola_lalandi_dorsalis
ENSGACG00000011935	rnaseh1	90	53.480	ENSSPUG00000006644	RNASEH1	93	53.480	Sphenodon_punctatus
ENSGACG00000011935	rnaseh1	98	80.205	ENSSPAG00000009353	rnaseh1	96	80.205	Stegastes_partitus
ENSGACG00000011935	rnaseh1	88	54.478	ENSSSCG00000025305	RNASEH1	98	51.689	Sus_scrofa
ENSGACG00000011935	rnaseh1	90	55.197	ENSTGUG00000012980	RNASEH1	93	55.556	Taeniopygia_guttata
ENSGACG00000011935	rnaseh1	94	74.021	ENSTRUG00000015774	rnaseh1	97	74.170	Takifugu_rubripes
ENSGACG00000011935	rnaseh1	91	75.646	ENSTNIG00000010715	rnaseh1	97	75.646	Tetraodon_nigroviridis
ENSGACG00000011935	rnaseh1	98	49.832	ENSTTRG00000001615	RNASEH1	99	49.329	Tursiops_truncatus
ENSGACG00000011935	rnaseh1	51	65.101	ENSUAMG00000018254	RNASEH1	77	65.101	Ursus_americanus
ENSGACG00000011935	rnaseh1	69	53.333	ENSUMAG00000003941	RNASEH1	65	53.333	Ursus_maritimus
ENSGACG00000011935	rnaseh1	99	45.918	ENSVPAG00000011589	RNASEH1	99	45.918	Vicugna_pacos
ENSGACG00000011935	rnaseh1	98	52.740	ENSVVUG00000008633	RNASEH1	88	52.740	Vulpes_vulpes
ENSGACG00000011935	rnaseh1	98	49.832	ENSXETG00000001212	rnaseh1	100	49.832	Xenopus_tropicalis
ENSGACG00000011935	rnaseh1	88	40.000	ENSXETG00000030371	-	99	40.000	Xenopus_tropicalis
ENSGACG00000011935	rnaseh1	97	70.648	ENSXMAG00000002357	rnaseh1	99	70.648	Xiphophorus_maculatus