EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000011960 (Gene tree)
Gene ID: -
Gene Symbol: tbl3
Alias: cey|zgc:101778
Full Name: transducin (beta)-like 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 11042 bases
Position: chrgroupXI:10923087-10934128
Accession: ZDB-GENE-041114-104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015875	Utp13	PF08625.11	2.5e-41	1	1
ENSGACP00000015858	Utp13	PF08625.11	2.5e-41	1	1
ENSGACP00000015869	Utp13	PF08625.11	2.5e-41	1	1
ENSGACP00000015863	Utp13	PF08625.11	3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000015894	-	2828	-	ENSGACP00000015863	907 (aa)	-	G3PE39
ENSGACT00000015889	-	2564	-	ENSGACP00000015858	816 (aa)	-	G3PE34
ENSGACT00000015906	-	3109	-	ENSGACP00000015875	809 (aa)	-	G3PE51
ENSGACT00000015900	-	2454	-	ENSGACP00000015869	818 (aa)	-	G3PE45

Gene Model

Click here to download ENSGACG00000011960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000011960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000011960	tbl3	64	32.231	ENSGACG00000007380	wdr61	94	32.231
ENSGACG00000011960	tbl3	76	31.707	ENSGACG00000018182	wdr5	94	31.707
ENSGACG00000011960	tbl3	85	32.394	ENSGACG00000015476	prpf4	59	32.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000011960	tbl3	99	60.644	ENSG00000183751	TBL3	98	60.644	Homo_sapiens
ENSGACG00000011960	tbl3	99	86.476	ENSAPOG00000021308	tbl3	95	82.379	Acanthochromis_polyacanthus
ENSGACG00000011960	tbl3	98	61.104	ENSAMEG00000017654	TBL3	98	60.848	Ailuropoda_melanoleuca
ENSGACG00000011960	tbl3	99	87.905	ENSACIG00000007459	tbl3	99	87.920	Amphilophus_citrinellus
ENSGACG00000011960	tbl3	99	87.221	ENSAOCG00000000453	tbl3	98	82.057	Amphiprion_ocellaris
ENSGACG00000011960	tbl3	99	86.750	ENSAPEG00000010228	tbl3	99	86.750	Amphiprion_percula
ENSGACG00000011960	tbl3	99	89.082	ENSATEG00000024571	tbl3	100	83.351	Anabas_testudineus
ENSGACG00000011960	tbl3	94	60.505	ENSAPLG00000008515	TBL3	100	59.974	Anas_platyrhynchos
ENSGACG00000011960	tbl3	99	61.471	ENSANAG00000030472	TBL3	98	61.471	Aotus_nancymaae
ENSGACG00000011960	tbl3	99	87.639	ENSACLG00000027954	tbl3	100	82.511	Astatotilapia_calliptera
ENSGACG00000011960	tbl3	99	77.764	ENSAMXG00000042589	tbl3	97	72.494	Astyanax_mexicanus
ENSGACG00000011960	tbl3	99	61.491	ENSBTAG00000020366	TBL3	99	60.414	Bos_taurus
ENSGACG00000011960	tbl3	98	31.174	WBGene00013143	Y53C12B.1	99	31.174	Caenorhabditis_elegans
ENSGACG00000011960	tbl3	99	61.015	ENSCJAG00000015245	TBL3	98	61.015	Callithrix_jacchus
ENSGACG00000011960	tbl3	99	59.828	ENSCAFG00000019430	TBL3	98	67.537	Canis_familiaris
ENSGACG00000011960	tbl3	99	59.975	ENSCAFG00020026321	TBL3	99	59.975	Canis_lupus_dingo
ENSGACG00000011960	tbl3	99	61.242	ENSCHIG00000007747	TBL3	97	61.242	Capra_hircus
ENSGACG00000011960	tbl3	99	60.918	ENSTSYG00000036142	TBL3	98	60.918	Carlito_syrichta
ENSGACG00000011960	tbl3	99	56.429	ENSCAPG00000016762	TBL3	96	56.289	Cavia_aperea
ENSGACG00000011960	tbl3	99	60.870	ENSCPOG00000005998	TBL3	99	60.419	Cavia_porcellus
ENSGACG00000011960	tbl3	99	61.262	ENSCCAG00000034486	TBL3	98	61.262	Cebus_capucinus
ENSGACG00000011960	tbl3	99	60.799	ENSCATG00000031298	TBL3	99	59.976	Cercocebus_atys
ENSGACG00000011960	tbl3	99	60.745	ENSCLAG00000013342	TBL3	99	60.296	Chinchilla_lanigera
ENSGACG00000011960	tbl3	99	60.300	ENSCSAG00000011191	TBL3	99	59.559	Chlorocebus_sabaeus
ENSGACG00000011960	tbl3	99	65.475	ENSCPBG00000000253	TBL3	99	64.878	Chrysemys_picta_bellii
ENSGACG00000011960	tbl3	99	46.269	ENSCING00000009521	-	99	46.393	Ciona_intestinalis
ENSGACG00000011960	tbl3	99	60.799	ENSCANG00000031169	TBL3	99	59.853	Colobus_angolensis_palliatus
ENSGACG00000011960	tbl3	99	60.918	ENSCGRG00001021817	Tbl3	99	60.468	Cricetulus_griseus_chok1gshd
ENSGACG00000011960	tbl3	99	60.918	ENSCGRG00000013364	Tbl3	99	60.468	Cricetulus_griseus_crigri
ENSGACG00000011960	tbl3	99	86.369	ENSCSEG00000015634	tbl3	99	83.004	Cynoglossus_semilaevis
ENSGACG00000011960	tbl3	99	85.484	ENSCVAG00000002720	tbl3	99	83.773	Cyprinodon_variegatus
ENSGACG00000011960	tbl3	99	66.667	ENSDARG00000052344	tbl3	94	64.554	Danio_rerio
ENSGACG00000011960	tbl3	88	54.659	ENSDNOG00000019996	TBL3	98	54.937	Dasypus_novemcinctus
ENSGACG00000011960	tbl3	98	61.982	ENSDORG00000007377	Tbl3	97	61.798	Dipodomys_ordii
ENSGACG00000011960	tbl3	98	32.888	FBgn0033454	CG1671	99	32.888	Drosophila_melanogaster
ENSGACG00000011960	tbl3	85	63.810	ENSETEG00000019403	TBL3	86	63.294	Echinops_telfairi
ENSGACG00000011960	tbl3	99	54.647	ENSEBUG00000003526	tbl3	99	51.701	Eptatretus_burgeri
ENSGACG00000011960	tbl3	100	60.271	ENSEASG00005004649	TBL3	99	60.148	Equus_asinus_asinus
ENSGACG00000011960	tbl3	100	60.271	ENSECAG00000019299	TBL3	99	60.148	Equus_caballus
ENSGACG00000011960	tbl3	78	66.523	ENSEEUG00000000761	-	60	65.890	Erinaceus_europaeus
ENSGACG00000011960	tbl3	99	60.000	ENSELUG00000007394	tbl3	99	59.801	Esox_lucius
ENSGACG00000011960	tbl3	99	61.242	ENSFCAG00000011740	TBL3	99	60.789	Felis_catus
ENSGACG00000011960	tbl3	99	62.868	ENSFALG00000003409	TBL3	99	62.515	Ficedula_albicollis
ENSGACG00000011960	tbl3	99	61.366	ENSFDAG00000007751	TBL3	99	61.036	Fukomys_damarensis
ENSGACG00000011960	tbl3	99	85.856	ENSFHEG00000002234	tbl3	100	79.506	Fundulus_heteroclitus
ENSGACG00000011960	tbl3	99	69.050	ENSGMOG00000011562	tbl3	100	78.094	Gadus_morhua
ENSGACG00000011960	tbl3	99	63.704	ENSGALG00000005558	TBL3	99	63.415	Gallus_gallus
ENSGACG00000011960	tbl3	99	86.228	ENSGAFG00000020165	tbl3	97	81.532	Gambusia_affinis
ENSGACG00000011960	tbl3	99	65.802	ENSGAGG00000024028	TBL3	99	65.201	Gopherus_agassizii
ENSGACG00000011960	tbl3	99	60.644	ENSGGOG00000009378	TBL3	98	60.644	Gorilla_gorilla
ENSGACG00000011960	tbl3	99	87.763	ENSHBUG00000011872	tbl3	98	85.220	Haplochromis_burtoni
ENSGACG00000011960	tbl3	99	61.118	ENSHGLG00000002431	TBL3	99	60.741	Heterocephalus_glaber_female
ENSGACG00000011960	tbl3	99	60.124	ENSHGLG00100012878	TBL3	99	59.753	Heterocephalus_glaber_male
ENSGACG00000011960	tbl3	99	85.130	ENSHCOG00000016689	tbl3	96	80.580	Hippocampus_comes
ENSGACG00000011960	tbl3	99	76.799	ENSIPUG00000003568	TBL3	94	73.441	Ictalurus_punctatus
ENSGACG00000011960	tbl3	99	61.471	ENSSTOG00000012964	TBL3	98	61.471	Ictidomys_tridecemlineatus
ENSGACG00000011960	tbl3	99	61.049	ENSJJAG00000004124	Tbl3	99	60.595	Jaculus_jaculus
ENSGACG00000011960	tbl3	99	86.849	ENSKMAG00000020117	tbl3	99	84.525	Kryptolebias_marmoratus
ENSGACG00000011960	tbl3	99	88.875	ENSLBEG00000026742	tbl3	100	83.961	Labrus_bergylta
ENSGACG00000011960	tbl3	99	66.748	ENSLACG00000000615	TBL3	99	66.830	Latimeria_chalumnae
ENSGACG00000011960	tbl3	99	75.186	ENSLOCG00000008853	tbl3	94	70.767	Lepisosteus_oculatus
ENSGACG00000011960	tbl3	99	59.801	ENSLAFG00000004699	TBL3	99	59.483	Loxodonta_africana
ENSGACG00000011960	tbl3	99	60.549	ENSMFAG00000030302	TBL3	99	59.608	Macaca_fascicularis
ENSGACG00000011960	tbl3	99	60.424	ENSMMUG00000007943	TBL3	99	59.486	Macaca_mulatta
ENSGACG00000011960	tbl3	99	60.424	ENSMNEG00000032603	TBL3	99	59.486	Macaca_nemestrina
ENSGACG00000011960	tbl3	98	60.804	ENSMLEG00000043359	TBL3	99	60.049	Mandrillus_leucophaeus
ENSGACG00000011960	tbl3	99	89.136	ENSMAMG00000023507	tbl3	100	83.600	Mastacembelus_armatus
ENSGACG00000011960	tbl3	99	87.763	ENSMZEG00005000630	tbl3	100	82.618	Maylandia_zebra
ENSGACG00000011960	tbl3	99	63.288	ENSMGAG00000005694	TBL3	99	62.958	Meleagris_gallopavo
ENSGACG00000011960	tbl3	99	61.366	ENSMAUG00000008718	Tbl3	99	61.036	Mesocricetus_auratus
ENSGACG00000011960	tbl3	99	60.967	ENSMICG00000012787	TBL3	87	60.688	Microcebus_murinus
ENSGACG00000011960	tbl3	99	61.242	ENSMOCG00000019634	Tbl3	99	60.789	Microtus_ochrogaster
ENSGACG00000011960	tbl3	99	86.032	ENSMMOG00000007551	tbl3	100	81.928	Mola_mola
ENSGACG00000011960	tbl3	99	62.360	ENSMODG00000016091	TBL3	98	62.360	Monodelphis_domestica
ENSGACG00000011960	tbl3	99	88.366	ENSMALG00000007013	tbl3	100	82.403	Monopterus_albus
ENSGACG00000011960	tbl3	99	61.235	MGP_CAROLIEiJ_G0021199	Tbl3	100	60.658	Mus_caroli
ENSGACG00000011960	tbl3	99	61.845	ENSMUSG00000040688	Tbl3	99	69.463	Mus_musculus
ENSGACG00000011960	tbl3	99	61.443	MGP_PahariEiJ_G0023516	Tbl3	99	60.934	Mus_pahari
ENSGACG00000011960	tbl3	99	61.721	MGP_SPRETEiJ_G0022110	Tbl3	99	69.000	Mus_spretus
ENSGACG00000011960	tbl3	99	61.118	ENSMPUG00000015545	TBL3	98	61.118	Mustela_putorius_furo
ENSGACG00000011960	tbl3	99	61.214	ENSMLUG00000011684	TBL3	99	61.036	Myotis_lucifugus
ENSGACG00000011960	tbl3	99	60.497	ENSNGAG00000002428	Tbl3	99	60.049	Nannospalax_galili
ENSGACG00000011960	tbl3	99	83.791	ENSNBRG00000003173	tbl3	98	83.811	Neolamprologus_brichardi
ENSGACG00000011960	tbl3	99	60.149	ENSNLEG00000008889	TBL3	98	60.074	Nomascus_leucogenys
ENSGACG00000011960	tbl3	92	69.804	ENSMEUG00000004011	TBL3	93	68.441	Notamacropus_eugenii
ENSGACG00000011960	tbl3	95	59.561	ENSOPRG00000002527	-	95	59.561	Ochotona_princeps
ENSGACG00000011960	tbl3	99	60.373	ENSODEG00000013930	TBL3	99	59.926	Octodon_degus
ENSGACG00000011960	tbl3	99	88.010	ENSONIG00000002319	tbl3	99	87.205	Oreochromis_niloticus
ENSGACG00000011960	tbl3	98	60.126	ENSOANG00000009819	TBL3	99	60.126	Ornithorhynchus_anatinus
ENSGACG00000011960	tbl3	99	84.882	ENSORLG00000009312	tbl3	95	84.882	Oryzias_latipes
ENSGACG00000011960	tbl3	99	84.882	ENSORLG00020017711	tbl3	95	84.882	Oryzias_latipes_hni
ENSGACG00000011960	tbl3	99	84.511	ENSORLG00015007004	tbl3	95	80.656	Oryzias_latipes_hsok
ENSGACG00000011960	tbl3	99	86.121	ENSOMEG00000012684	tbl3	97	83.767	Oryzias_melastigma
ENSGACG00000011960	tbl3	99	60.124	ENSOGAG00000010104	TBL3	98	60.124	Otolemur_garnettii
ENSGACG00000011960	tbl3	81	55.389	ENSOARG00000017059	TBL3	100	54.896	Ovis_aries
ENSGACG00000011960	tbl3	99	60.396	ENSPPAG00000041939	TBL3	98	60.396	Pan_paniscus
ENSGACG00000011960	tbl3	99	61.166	ENSPPRG00000000893	TBL3	99	60.714	Panthera_pardus
ENSGACG00000011960	tbl3	99	63.482	ENSPTIG00000010377	TBL3	99	62.683	Panthera_tigris_altaica
ENSGACG00000011960	tbl3	99	60.520	ENSPTRG00000007621	TBL3	98	60.520	Pan_troglodytes
ENSGACG00000011960	tbl3	99	60.549	ENSPANG00000007024	TBL3	97	60.549	Papio_anubis
ENSGACG00000011960	tbl3	99	73.482	ENSPKIG00000000136	tbl3	94	71.047	Paramormyrops_kingsleyae
ENSGACG00000011960	tbl3	99	65.960	ENSPSIG00000013024	TBL3	98	65.598	Pelodiscus_sinensis
ENSGACG00000011960	tbl3	98	84.005	ENSPMGG00000020660	tbl3	96	84.005	Periophthalmus_magnuspinnatus
ENSGACG00000011960	tbl3	98	61.375	ENSPEMG00000009768	Tbl3	99	60.951	Peromyscus_maniculatus_bairdii
ENSGACG00000011960	tbl3	90	55.429	ENSPMAG00000004860	tbl3	99	53.701	Petromyzon_marinus
ENSGACG00000011960	tbl3	99	61.491	ENSPCIG00000021811	TBL3	99	60.339	Phascolarctos_cinereus
ENSGACG00000011960	tbl3	99	85.484	ENSPFOG00000009834	tbl3	100	79.117	Poecilia_formosa
ENSGACG00000011960	tbl3	99	85.484	ENSPLAG00000016437	tbl3	100	78.947	Poecilia_latipinna
ENSGACG00000011960	tbl3	99	85.484	ENSPMEG00000019513	tbl3	100	79.117	Poecilia_mexicana
ENSGACG00000011960	tbl3	99	60.396	ENSPPYG00000006977	TBL3	98	60.396	Pongo_abelii
ENSGACG00000011960	tbl3	99	61.414	ENSPCOG00000019749	TBL3	99	61.002	Propithecus_coquereli
ENSGACG00000011960	tbl3	98	61.845	ENSPVAG00000016710	TBL3	98	61.845	Pteropus_vampyrus
ENSGACG00000011960	tbl3	98	79.114	ENSPNYG00000017137	tbl3	98	79.114	Pundamilia_nyererei
ENSGACG00000011960	tbl3	99	77.295	ENSPNAG00000017527	tbl3	98	75.513	Pygocentrus_nattereri
ENSGACG00000011960	tbl3	99	61.615	ENSRNOG00000013429	Tbl3	99	61.159	Rattus_norvegicus
ENSGACG00000011960	tbl3	99	56.608	ENSRBIG00000032982	TBL3	98	55.936	Rhinopithecus_bieti
ENSGACG00000011960	tbl3	99	60.549	ENSRROG00000026697	TBL3	99	59.804	Rhinopithecus_roxellana
ENSGACG00000011960	tbl3	99	61.139	ENSSBOG00000013923	TBL3	98	61.139	Saimiri_boliviensis_boliviensis
ENSGACG00000011960	tbl3	99	62.531	ENSSHAG00000015266	TBL3	99	61.353	Sarcophilus_harrisii
ENSGACG00000011960	tbl3	99	73.358	ENSSFOG00015023537	tbl3	92	69.545	Scleropages_formosus
ENSGACG00000011960	tbl3	99	88.025	ENSSMAG00000014338	tbl3	99	85.839	Scophthalmus_maximus
ENSGACG00000011960	tbl3	99	88.561	ENSSDUG00000008158	tbl3	100	83.706	Seriola_dumerili
ENSGACG00000011960	tbl3	99	88.656	ENSSLDG00000023733	tbl3	99	85.998	Seriola_lalandi_dorsalis
ENSGACG00000011960	tbl3	96	65.534	ENSSPUG00000012939	TBL3	99	64.678	Sphenodon_punctatus
ENSGACG00000011960	tbl3	99	88.213	ENSSPAG00000010659	tbl3	100	82.777	Stegastes_partitus
ENSGACG00000011960	tbl3	99	60.099	ENSSSCG00000037686	TBL3	99	59.533	Sus_scrofa
ENSGACG00000011960	tbl3	99	61.596	ENSTGUG00000006592	-	100	61.596	Taeniopygia_guttata
ENSGACG00000011960	tbl3	99	82.614	ENSTRUG00000007010	tbl3	96	78.611	Takifugu_rubripes
ENSGACG00000011960	tbl3	99	81.706	ENSTNIG00000018011	tbl3	100	81.152	Tetraodon_nigroviridis
ENSGACG00000011960	tbl3	51	65.686	ENSTBEG00000000017	-	52	65.686	Tupaia_belangeri
ENSGACG00000011960	tbl3	99	59.503	ENSTTRG00000011395	TBL3	98	59.259	Tursiops_truncatus
ENSGACG00000011960	tbl3	98	61.375	ENSUAMG00000019276	TBL3	98	61.118	Ursus_americanus
ENSGACG00000011960	tbl3	98	59.630	ENSUMAG00000022149	TBL3	97	58.780	Ursus_maritimus
ENSGACG00000011960	tbl3	99	60.497	ENSVVUG00000009589	TBL3	98	60.497	Vulpes_vulpes
ENSGACG00000011960	tbl3	99	60.269	ENSXETG00000007217	tbl3	97	60.269	Xenopus_tropicalis
ENSGACG00000011960	tbl3	99	86.104	ENSXCOG00000010277	tbl3	99	86.104	Xiphophorus_couchianus
ENSGACG00000011960	tbl3	99	85.856	ENSXMAG00000014866	tbl3	100	79.122	Xiphophorus_maculatus