EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000012072 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: zgc:174910
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7218 bases
Position: chrgroupVI:16482667-16489884
Accession: ZDB-GENE-080204-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000015985	KH_1	PF00013.29	1.3e-14	1	1
ENSGACP00000015978	DEAD	PF00270.29	4.6e-43	1	1
ENSGACP00000015985	DEAD	PF00270.29	6.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016009	-	1509	-	ENSGACP00000015978	503 (aa)	-	G3PEF4
ENSGACT00000016016	-	1743	-	ENSGACP00000015985	581 (aa)	-	G3PEG1

Gene Model

Click here to download ENSGACG00000012072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000012072	ddx43	81	33.252	ENSGACG00000008863	ddx59	67	32.787
ENSGACG00000012072	ddx43	70	32.676	ENSGACG00000012258	ddx6	72	32.676
ENSGACG00000012072	ddx43	71	40.761	ENSGACG00000018334	DDX41	63	39.440
ENSGACG00000012072	ddx43	71	38.381	ENSGACG00000008206	-	57	38.155
ENSGACG00000012072	ddx43	68	34.454	ENSGACG00000008047	ddx49	80	33.795
ENSGACG00000012072	ddx43	84	44.366	ENSGACG00000007026	ddx5	70	43.049
ENSGACG00000012072	ddx43	69	30.857	ENSGACG00000006096	DDX39A	80	30.857
ENSGACG00000012072	ddx43	69	32.286	ENSGACG00000019335	ddx39aa	80	32.286
ENSGACG00000012072	ddx43	70	30.194	ENSGACG00000011283	zgc:193690	72	30.194
ENSGACG00000012072	ddx43	70	34.091	ENSGACG00000016054	eif4a2	84	34.091
ENSGACG00000012072	ddx43	65	36.012	ENSGACG00000016060	ddx21	57	33.592
ENSGACG00000012072	ddx43	70	33.239	ENSGACG00000020004	eif4a3	87	33.239
ENSGACG00000012072	ddx43	78	38.213	ENSGACG00000015323	ddx4	82	38.213
ENSGACG00000012072	ddx43	77	35.122	ENSGACG00000014407	-	60	35.122
ENSGACG00000012072	ddx43	84	36.891	ENSGACG00000019254	DDX5	69	36.203
ENSGACG00000012072	ddx43	70	32.303	ENSGACG00000003401	ddx61	72	32.303
ENSGACG00000012072	ddx43	69	34.006	ENSGACG00000020072	eif4a1b	87	34.006
ENSGACG00000012072	ddx43	67	32.213	ENSGACG00000015591	ddx55	57	32.213
ENSGACG00000012072	ddx43	84	38.173	ENSGACG00000019151	si:dkey-156n14.5	70	37.277
ENSGACG00000012072	ddx43	68	39.067	ENSGACG00000007092	ddx47	73	39.067
ENSGACG00000012072	ddx43	70	32.584	ENSGACG00000002413	-	72	32.584
ENSGACG00000012072	ddx43	76	40.385	ENSGACG00000003024	ddx23	73	38.889
ENSGACG00000012072	ddx43	65	33.234	ENSGACG00000001563	ddx18	57	32.267
ENSGACG00000012072	ddx43	75	31.969	ENSGACG00000020624	ddx52	80	31.969
ENSGACG00000012072	ddx43	69	42.857	ENSGACG00000011162	ddx1	55	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012072	ddx43	97	79.549	ENSAPOG00000001712	ddx43	80	79.930	Acanthochromis_polyacanthus
ENSGACG00000012072	ddx43	100	66.014	ENSACIG00000012170	ddx43	87	64.675	Amphilophus_citrinellus
ENSGACG00000012072	ddx43	97	84.348	ENSAOCG00000001331	ddx43	80	84.764	Amphiprion_ocellaris
ENSGACG00000012072	ddx43	97	84.886	ENSAPEG00000001133	ddx43	79	85.310	Amphiprion_percula
ENSGACG00000012072	ddx43	99	90.071	ENSATEG00000012664	ddx43	81	83.894	Anabas_testudineus
ENSGACG00000012072	ddx43	97	63.121	ENSAPLG00000010182	-	95	69.783	Anas_platyrhynchos
ENSGACG00000012072	ddx43	99	63.481	ENSACAG00000004387	-	86	65.771	Anolis_carolinensis
ENSGACG00000012072	ddx43	97	80.348	ENSACLG00000026081	ddx43	82	80.911	Astatotilapia_calliptera
ENSGACG00000012072	ddx43	97	74.341	ENSAMXG00000004457	ddx43	77	74.336	Astyanax_mexicanus
ENSGACG00000012072	ddx43	86	46.652	WBGene00013214	Y54G11A.3	89	46.652	Caenorhabditis_elegans
ENSGACG00000012072	ddx43	52	72.549	ENSCSEG00000000532	ddx43	77	72.131	Cynoglossus_semilaevis
ENSGACG00000012072	ddx43	88	72.798	ENSCVAG00000009980	ddx43	78	72.798	Cyprinodon_variegatus
ENSGACG00000012072	ddx43	99	74.048	ENSDARG00000022614	ddx43	78	75.044	Danio_rerio
ENSGACG00000012072	ddx43	97	48.801	FBgn0037549	CG7878	82	48.962	Drosophila_melanogaster
ENSGACG00000012072	ddx43	70	47.581	ENSETEG00000019547	-	67	47.059	Echinops_telfairi
ENSGACG00000012072	ddx43	84	49.881	ENSETEG00000014626	-	87	48.261	Echinops_telfairi
ENSGACG00000012072	ddx43	97	74.824	ENSELUG00000012126	ddx43	85	75.355	Esox_lucius
ENSGACG00000012072	ddx43	99	64.706	ENSFALG00000007042	-	82	66.245	Ficedula_albicollis
ENSGACG00000012072	ddx43	84	86.761	ENSFHEG00000011226	ddx43	89	82.495	Fundulus_heteroclitus
ENSGACG00000012072	ddx43	79	85.316	ENSGMOG00000004178	ddx43	96	79.007	Gadus_morhua
ENSGACG00000012072	ddx43	81	73.580	ENSGALG00000015928	-	96	71.631	Gallus_gallus
ENSGACG00000012072	ddx43	97	77.069	ENSGAFG00000012622	ddx43	82	76.817	Gambusia_affinis
ENSGACG00000012072	ddx43	100	60.757	ENSGAGG00000025230	-	80	62.816	Gopherus_agassizii
ENSGACG00000012072	ddx43	97	80.000	ENSHBUG00000011653	ddx43	82	80.560	Haplochromis_burtoni
ENSGACG00000012072	ddx43	84	86.052	ENSHCOG00000014704	ddx43	80	77.861	Hippocampus_comes
ENSGACG00000012072	ddx43	97	74.561	ENSIPUG00000023423	ddx43	82	75.265	Ictalurus_punctatus
ENSGACG00000012072	ddx43	97	80.589	ENSKMAG00000016167	ddx43	82	80.977	Kryptolebias_marmoratus
ENSGACG00000012072	ddx43	100	87.500	ENSLBEG00000007913	ddx43	81	82.801	Labrus_bergylta
ENSGACG00000012072	ddx43	78	74.365	ENSLACG00000000741	ddx43	100	66.393	Latimeria_chalumnae
ENSGACG00000012072	ddx43	97	71.127	ENSLOCG00000016170	ddx43	83	71.403	Lepisosteus_oculatus
ENSGACG00000012072	ddx43	100	87.707	ENSMAMG00000022128	ddx43	81	78.470	Mastacembelus_armatus
ENSGACG00000012072	ddx43	97	80.348	ENSMZEG00005027349	ddx43	82	80.911	Maylandia_zebra
ENSGACG00000012072	ddx43	99	63.542	ENSMGAG00000013832	-	95	65.343	Meleagris_gallopavo
ENSGACG00000012072	ddx43	97	80.708	ENSMMOG00000007346	ddx43	83	81.283	Mola_mola
ENSGACG00000012072	ddx43	99	58.520	ENSMODG00000018546	-	86	59.715	Monodelphis_domestica
ENSGACG00000012072	ddx43	98	53.860	ENSMODG00000014335	-	95	54.286	Monodelphis_domestica
ENSGACG00000012072	ddx43	99	87.943	ENSMALG00000020673	ddx43	82	82.230	Monopterus_albus
ENSGACG00000012072	ddx43	97	81.449	ENSNBRG00000010942	ddx43	83	82.028	Neolamprologus_brichardi
ENSGACG00000012072	ddx43	97	80.565	ENSONIG00000001195	ddx43	85	80.961	Oreochromis_niloticus
ENSGACG00000012072	ddx43	53	69.966	ENSOANG00000010479	-	100	68.810	Ornithorhynchus_anatinus
ENSGACG00000012072	ddx43	64	64.628	ENSOANG00000006467	-	100	61.421	Ornithorhynchus_anatinus
ENSGACG00000012072	ddx43	97	78.883	ENSORLG00000002267	ddx43	87	79.438	Oryzias_latipes
ENSGACG00000012072	ddx43	97	78.883	ENSORLG00020018592	ddx43	88	79.438	Oryzias_latipes_hni
ENSGACG00000012072	ddx43	97	78.709	ENSORLG00015004854	ddx43	87	79.262	Oryzias_latipes_hsok
ENSGACG00000012072	ddx43	97	78.223	ENSOMEG00000023418	ddx43	88	78.596	Oryzias_melastigma
ENSGACG00000012072	ddx43	97	72.566	ENSPKIG00000002941	ddx43	79	72.549	Paramormyrops_kingsleyae
ENSGACG00000012072	ddx43	93	66.300	ENSPSIG00000002202	-	87	66.300	Pelodiscus_sinensis
ENSGACG00000012072	ddx43	53	66.791	ENSPMAG00000006112	ddx43	100	68.240	Petromyzon_marinus
ENSGACG00000012072	ddx43	98	52.817	ENSPCIG00000002492	-	89	53.321	Phascolarctos_cinereus
ENSGACG00000012072	ddx43	81	69.212	ENSPCIG00000017981	-	96	67.765	Phascolarctos_cinereus
ENSGACG00000012072	ddx43	97	78.547	ENSPFOG00000004241	ddx43	82	79.058	Poecilia_formosa
ENSGACG00000012072	ddx43	97	78.584	ENSPLAG00000023362	ddx43	82	79.094	Poecilia_latipinna
ENSGACG00000012072	ddx43	97	78.893	ENSPMEG00000004870	ddx43	82	79.407	Poecilia_mexicana
ENSGACG00000012072	ddx43	97	71.705	ENSPREG00000000923	ddx43	81	71.809	Poecilia_reticulata
ENSGACG00000012072	ddx43	95	77.132	ENSPNYG00000009064	ddx43	80	77.697	Pundamilia_nyererei
ENSGACG00000012072	ddx43	97	73.684	ENSPNAG00000001232	ddx43	79	73.322	Pygocentrus_nattereri
ENSGACG00000012072	ddx43	98	56.174	ENSSHAG00000016933	-	96	56.786	Sarcophilus_harrisii
ENSGACG00000012072	ddx43	99	58.348	ENSSHAG00000001847	-	87	58.392	Sarcophilus_harrisii
ENSGACG00000012072	ddx43	94	69.636	ENSSFOG00015012193	ddx43	85	69.104	Scleropages_formosus
ENSGACG00000012072	ddx43	97	82.986	ENSSMAG00000019288	ddx43	78	83.392	Scophthalmus_maximus
ENSGACG00000012072	ddx43	99	92.199	ENSSDUG00000020120	ddx43	80	85.639	Seriola_dumerili
ENSGACG00000012072	ddx43	94	93.165	ENSSLDG00000017225	ddx43	79	83.039	Seriola_lalandi_dorsalis
ENSGACG00000012072	ddx43	84	63.593	ENSSPUG00000018097	-	92	62.031	Sphenodon_punctatus
ENSGACG00000012072	ddx43	97	84.119	ENSSPAG00000006858	ddx43	81	85.587	Stegastes_partitus
ENSGACG00000012072	ddx43	98	64.286	ENSTGUG00000012684	-	93	65.766	Taeniopygia_guttata
ENSGACG00000012072	ddx43	97	68.221	ENSTRUG00000012795	ddx43	84	68.467	Takifugu_rubripes
ENSGACG00000012072	ddx43	97	74.690	ENSTNIG00000009822	ddx43	97	74.690	Tetraodon_nigroviridis
ENSGACG00000012072	ddx43	98	64.499	ENSXETG00000011767	ddx43	83	64.654	Xenopus_tropicalis
ENSGACG00000012072	ddx43	84	86.761	ENSXCOG00000013810	ddx43	81	73.619	Xiphophorus_couchianus
ENSGACG00000012072	ddx43	97	76.804	ENSXMAG00000017126	ddx43	82	77.470	Xiphophorus_maculatus