EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000012106 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5180 bases
Position: chrgroupXVII:14488280-14493459
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016025	MBD	PF01429.19	6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016056	-	1734	-	ENSGACP00000016025	578 (aa)	-	G3PEK1

Gene Model

Click here to download ENSGACG00000012106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012106	-	58	33.983	ENSG00000141644	MBD1	75	54.545	Homo_sapiens
ENSGACG00000012106	-	99	74.324	ENSAPOG00000012810	mbd1b	72	74.324	Acanthochromis_polyacanthus
ENSGACG00000012106	-	99	46.352	ENSACIG00000010590	mbd1b	77	46.781	Amphilophus_citrinellus
ENSGACG00000012106	-	99	79.730	ENSAOCG00000020272	mbd1b	72	79.730	Amphiprion_ocellaris
ENSGACG00000012106	-	99	79.730	ENSAPEG00000023230	mbd1b	72	79.730	Amphiprion_percula
ENSGACG00000012106	-	99	82.432	ENSATEG00000009608	mbd1b	72	82.432	Anabas_testudineus
ENSGACG00000012106	-	58	31.343	ENSACAG00000006091	-	99	31.343	Anolis_carolinensis
ENSGACG00000012106	-	58	33.152	ENSANAG00000036253	MBD1	70	31.095	Aotus_nancymaae
ENSGACG00000012106	-	99	55.882	ENSACLG00000021383	mbd1b	78	56.259	Astatotilapia_calliptera
ENSGACG00000012106	-	70	30.000	ENSBTAG00000003801	MBD1	61	35.570	Bos_taurus
ENSGACG00000012106	-	58	32.410	ENSCJAG00000004959	MBD1	70	31.000	Callithrix_jacchus
ENSGACG00000012106	-	70	32.609	ENSCAFG00020024272	MBD1	69	30.090	Canis_lupus_dingo
ENSGACG00000012106	-	58	33.053	ENSTSYG00000000509	MBD1	61	32.514	Carlito_syrichta
ENSGACG00000012106	-	58	30.024	ENSCPOG00000001671	MBD1	62	30.402	Cavia_porcellus
ENSGACG00000012106	-	50	60.656	ENSCATG00000029959	MBD1	70	31.061	Cercocebus_atys
ENSGACG00000012106	-	58	33.161	ENSCLAG00000007457	MBD1	57	30.296	Chinchilla_lanigera
ENSGACG00000012106	-	50	60.656	ENSCSAG00000018070	MBD1	63	30.964	Chlorocebus_sabaeus
ENSGACG00000012106	-	50	60.656	ENSCANG00000033425	MBD1	70	31.313	Colobus_angolensis_palliatus
ENSGACG00000012106	-	99	73.750	ENSCSEG00000009082	mbd1b	71	73.750	Cynoglossus_semilaevis
ENSGACG00000012106	-	97	73.973	ENSCVAG00000001167	mbd1b	70	73.973	Cyprinodon_variegatus
ENSGACG00000012106	-	93	62.121	ENSDARG00000025699	mbd1b	58	59.211	Danio_rerio
ENSGACG00000012106	-	58	31.733	ENSEASG00005003857	MBD1	68	33.071	Equus_asinus_asinus
ENSGACG00000012106	-	99	63.514	ENSELUG00000004375	mbd1b	69	63.514	Esox_lucius
ENSGACG00000012106	-	51	46.392	ENSFCAG00000015730	MBD1	73	33.333	Felis_catus
ENSGACG00000012106	-	99	75.342	ENSFHEG00000020120	mbd1b	72	75.342	Fundulus_heteroclitus
ENSGACG00000012106	-	99	76.712	ENSGAFG00000008975	mbd1b	69	76.712	Gambusia_affinis
ENSGACG00000012106	-	58	33.983	ENSGGOG00000016966	MBD1	65	32.609	Gorilla_gorilla
ENSGACG00000012106	-	99	53.802	ENSHBUG00000014270	mbd1b	78	55.965	Haplochromis_burtoni
ENSGACG00000012106	-	100	47.218	ENSHCOG00000009952	mbd1b	81	47.313	Hippocampus_comes
ENSGACG00000012106	-	93	52.632	ENSIPUG00000015243	-	65	52.632	Ictalurus_punctatus
ENSGACG00000012106	-	58	31.043	ENSSTOG00000007780	MBD1	64	32.316	Ictidomys_tridecemlineatus
ENSGACG00000012106	-	98	78.082	ENSKMAG00000020760	mbd1b	80	50.957	Kryptolebias_marmoratus
ENSGACG00000012106	-	98	31.588	ENSLACG00000002414	-	94	31.751	Latimeria_chalumnae
ENSGACG00000012106	-	50	60.656	ENSMFAG00000026335	MBD1	70	30.711	Macaca_fascicularis
ENSGACG00000012106	-	50	60.656	ENSMMUG00000009050	MBD1	70	30.711	Macaca_mulatta
ENSGACG00000012106	-	50	60.656	ENSMNEG00000038822	MBD1	70	30.711	Macaca_nemestrina
ENSGACG00000012106	-	50	60.656	ENSMLEG00000043121	MBD1	70	31.313	Mandrillus_leucophaeus
ENSGACG00000012106	-	75	81.081	ENSMAMG00000023341	-	60	52.289	Mastacembelus_armatus
ENSGACG00000012106	-	99	56.029	ENSMZEG00005010421	mbd1b	78	56.406	Maylandia_zebra
ENSGACG00000012106	-	58	31.405	ENSMICG00000006414	MBD1	54	59.375	Microcebus_murinus
ENSGACG00000012106	-	66	87.179	ENSMMOG00000011607	mbd1b	79	87.179	Mola_mola
ENSGACG00000012106	-	99	52.908	ENSMALG00000007808	mbd1b	80	54.376	Monopterus_albus
ENSGACG00000012106	-	63	32.609	ENSMPUG00000008843	MBD1	67	33.043	Mustela_putorius_furo
ENSGACG00000012106	-	50	60.656	ENSNLEG00000011661	-	70	30.964	Nomascus_leucogenys
ENSGACG00000012106	-	99	54.345	ENSONIG00000020289	mbd1b	86	51.719	Oreochromis_niloticus
ENSGACG00000012106	-	99	50.941	ENSORLG00000029390	mbd1b	79	50.720	Oryzias_latipes
ENSGACG00000012106	-	99	51.375	ENSORLG00020000575	mbd1b	79	51.379	Oryzias_latipes_hni
ENSGACG00000012106	-	99	51.375	ENSORLG00015014812	mbd1b	80	51.153	Oryzias_latipes_hsok
ENSGACG00000012106	-	99	74.324	ENSOMEG00000023660	mbd1b	72	74.324	Oryzias_melastigma
ENSGACG00000012106	-	58	32.591	ENSPPAG00000038886	MBD1	69	31.771	Pan_paniscus
ENSGACG00000012106	-	70	32.609	ENSPPRG00000021387	MBD1	78	32.084	Panthera_pardus
ENSGACG00000012106	-	70	32.609	ENSPTIG00000021231	MBD1	73	33.333	Panthera_tigris_altaica
ENSGACG00000012106	-	58	33.983	ENSPTRG00000010021	MBD1	70	31.771	Pan_troglodytes
ENSGACG00000012106	-	50	60.656	ENSPANG00000010867	MBD1	70	31.313	Papio_anubis
ENSGACG00000012106	-	100	76.712	ENSPFOG00000007511	mbd1b	78	76.712	Poecilia_formosa
ENSGACG00000012106	-	100	76.712	ENSPLAG00000021258	mbd1b	78	76.712	Poecilia_latipinna
ENSGACG00000012106	-	100	76.712	ENSPMEG00000024145	mbd1b	78	76.712	Poecilia_mexicana
ENSGACG00000012106	-	100	76.712	ENSPREG00000021805	mbd1b	78	76.712	Poecilia_reticulata
ENSGACG00000012106	-	50	60.656	ENSPPYG00000009158	MBD1	57	30.946	Pongo_abelii
ENSGACG00000012106	-	58	33.062	ENSPCOG00000012450	MBD1	70	31.186	Propithecus_coquereli
ENSGACG00000012106	-	98	57.576	ENSPNAG00000018075	mbd1b	70	55.405	Pygocentrus_nattereri
ENSGACG00000012106	-	58	33.983	ENSRBIG00000041294	MBD1	62	31.688	Rhinopithecus_bieti
ENSGACG00000012106	-	50	60.656	ENSRROG00000032517	MBD1	67	32.982	Rhinopithecus_roxellana
ENSGACG00000012106	-	58	33.149	ENSSBOG00000027169	MBD1	70	32.170	Saimiri_boliviensis_boliviensis
ENSGACG00000012106	-	70	60.417	ENSSFOG00015008591	-	50	60.417	Scleropages_formosus
ENSGACG00000012106	-	99	74.324	ENSSMAG00000014640	mbd1b	66	74.324	Scophthalmus_maximus
ENSGACG00000012106	-	99	81.081	ENSSDUG00000012996	mbd1b	68	81.081	Seriola_dumerili
ENSGACG00000012106	-	99	48.653	ENSSLDG00000012422	mbd1b	70	47.643	Seriola_lalandi_dorsalis
ENSGACG00000012106	-	99	79.730	ENSSPAG00000021447	mbd1b	71	79.730	Stegastes_partitus
ENSGACG00000012106	-	58	33.243	ENSSSCG00000004516	MBD1	71	32.474	Sus_scrofa
ENSGACG00000012106	-	99	53.985	ENSTRUG00000013422	mbd1b	83	51.304	Takifugu_rubripes
ENSGACG00000012106	-	62	71.622	ENSTNIG00000007326	-	58	71.622	Tetraodon_nigroviridis
ENSGACG00000012106	-	61	32.208	ENSUAMG00000004752	MBD1	66	31.553	Ursus_americanus
ENSGACG00000012106	-	100	78.082	ENSXMAG00000005628	mbd1b	77	78.082	Xiphophorus_maculatus