EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000012232 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6483 bases
Position: chrgroupXIX:15682531-15689013
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016226	PRP4	PF08799.11	3.3e-11	1	1
ENSGACP00000016226	Prp18	PF02840.15	3.7e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016258	-	1660	-	ENSGACP00000016226	341 (aa)	-	G3PF52

Gene Model

Click here to download ENSGACG00000012232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012232	prpf18	100	81.871	ENSG00000165630	PRPF18	100	81.871	Homo_sapiens
ENSGACG00000012232	prpf18	100	91.789	ENSAPOG00000024177	prpf18	100	91.789	Acanthochromis_polyacanthus
ENSGACG00000012232	prpf18	100	81.287	ENSAMEG00000013591	-	100	81.287	Ailuropoda_melanoleuca
ENSGACG00000012232	prpf18	100	90.909	ENSACIG00000001186	prpf18	100	90.909	Amphilophus_citrinellus
ENSGACG00000012232	prpf18	98	91.317	ENSAOCG00000006572	prpf18	94	89.181	Amphiprion_ocellaris
ENSGACG00000012232	prpf18	100	91.496	ENSAPEG00000004564	prpf18	100	91.496	Amphiprion_percula
ENSGACG00000012232	prpf18	100	91.496	ENSATEG00000000303	prpf18	100	91.496	Anabas_testudineus
ENSGACG00000012232	prpf18	99	80.000	ENSAPLG00000003387	-	99	80.000	Anas_platyrhynchos
ENSGACG00000012232	prpf18	100	81.105	ENSACAG00000000818	-	100	81.105	Anolis_carolinensis
ENSGACG00000012232	prpf18	100	81.579	ENSANAG00000037445	-	100	81.579	Aotus_nancymaae
ENSGACG00000012232	prpf18	100	89.443	ENSACLG00000026296	prpf18	100	89.443	Astatotilapia_calliptera
ENSGACG00000012232	prpf18	100	85.143	ENSAMXG00000012848	prpf18	100	85.143	Astyanax_mexicanus
ENSGACG00000012232	prpf18	100	81.579	ENSBTAG00000017244	PRPF18	100	81.579	Bos_taurus
ENSGACG00000012232	prpf18	98	38.329	WBGene00009320	F32B6.3	97	38.329	Caenorhabditis_elegans
ENSGACG00000012232	prpf18	100	81.579	ENSCJAG00000009432	-	100	81.579	Callithrix_jacchus
ENSGACG00000012232	prpf18	100	81.287	ENSCAFG00000004735	-	100	81.287	Canis_familiaris
ENSGACG00000012232	prpf18	100	81.287	ENSCAFG00020007712	-	100	81.287	Canis_lupus_dingo
ENSGACG00000012232	prpf18	100	81.579	ENSCHIG00000000499	-	100	81.579	Capra_hircus
ENSGACG00000012232	prpf18	100	81.287	ENSTSYG00000003517	-	100	81.287	Carlito_syrichta
ENSGACG00000012232	prpf18	100	81.871	ENSCPOG00000021069	-	100	81.871	Cavia_porcellus
ENSGACG00000012232	prpf18	100	81.579	ENSCCAG00000036822	-	100	81.579	Cebus_capucinus
ENSGACG00000012232	prpf18	100	71.930	ENSCATG00000016633	-	100	71.930	Cercocebus_atys
ENSGACG00000012232	prpf18	100	81.579	ENSCLAG00000011770	-	100	81.579	Chinchilla_lanigera
ENSGACG00000012232	prpf18	100	79.772	ENSCSAG00000013109	-	100	79.772	Chlorocebus_sabaeus
ENSGACG00000012232	prpf18	100	77.247	ENSCPBG00000003100	-	100	77.809	Chrysemys_picta_bellii
ENSGACG00000012232	prpf18	99	55.102	ENSCING00000020481	-	97	55.102	Ciona_intestinalis
ENSGACG00000012232	prpf18	99	54.942	ENSCSAVG00000010546	-	99	54.942	Ciona_savignyi
ENSGACG00000012232	prpf18	100	81.871	ENSCANG00000034900	-	100	81.871	Colobus_angolensis_palliatus
ENSGACG00000012232	prpf18	100	81.871	ENSCGRG00001023665	Prpf18	100	81.871	Cricetulus_griseus_chok1gshd
ENSGACG00000012232	prpf18	100	81.871	ENSCGRG00000014690	Prpf18	100	81.871	Cricetulus_griseus_crigri
ENSGACG00000012232	prpf18	100	91.496	ENSCSEG00000005536	prpf18	99	91.496	Cynoglossus_semilaevis
ENSGACG00000012232	prpf18	100	89.150	ENSCVAG00000012401	prpf18	100	89.150	Cyprinodon_variegatus
ENSGACG00000012232	prpf18	100	86.257	ENSDARG00000058306	prpf18	100	86.257	Danio_rerio
ENSGACG00000012232	prpf18	100	81.579	ENSDNOG00000035607	-	100	81.579	Dasypus_novemcinctus
ENSGACG00000012232	prpf18	100	80.994	ENSDORG00000000858	Prpf18	100	80.994	Dipodomys_ordii
ENSGACG00000012232	prpf18	99	50.592	FBgn0027784	Prp18	98	50.592	Drosophila_melanogaster
ENSGACG00000012232	prpf18	100	73.099	ENSETEG00000015060	-	100	73.099	Echinops_telfairi
ENSGACG00000012232	prpf18	100	65.994	ENSEBUG00000016502	prpf18	99	65.994	Eptatretus_burgeri
ENSGACG00000012232	prpf18	100	81.579	ENSEASG00005019373	-	100	81.579	Equus_asinus_asinus
ENSGACG00000012232	prpf18	100	81.579	ENSECAG00000006997	PRPF18	100	81.579	Equus_caballus
ENSGACG00000012232	prpf18	92	49.367	ENSEEUG00000001171	-	100	49.367	Erinaceus_europaeus
ENSGACG00000012232	prpf18	100	88.630	ENSELUG00000022190	prpf18	100	88.630	Esox_lucius
ENSGACG00000012232	prpf18	100	80.994	ENSFCAG00000004436	-	100	80.994	Felis_catus
ENSGACG00000012232	prpf18	92	76.615	ENSFALG00000001912	-	97	76.615	Ficedula_albicollis
ENSGACG00000012232	prpf18	94	83.125	ENSFDAG00000014026	-	100	83.125	Fukomys_damarensis
ENSGACG00000012232	prpf18	99	56.232	ENSFDAG00000010713	-	97	56.232	Fukomys_damarensis
ENSGACG00000012232	prpf18	80	92.308	ENSFHEG00000020125	prpf18	100	92.308	Fundulus_heteroclitus
ENSGACG00000012232	prpf18	99	87.059	ENSGMOG00000012210	prpf18	99	87.059	Gadus_morhua
ENSGACG00000012232	prpf18	100	80.994	ENSGALG00000043593	-	100	80.994	Gallus_gallus
ENSGACG00000012232	prpf18	100	89.443	ENSGAFG00000006034	prpf18	100	89.443	Gambusia_affinis
ENSGACG00000012232	prpf18	100	80.409	ENSGAGG00000016878	-	100	80.409	Gopherus_agassizii
ENSGACG00000012232	prpf18	92	81.013	ENSGGOG00000025188	-	96	81.013	Gorilla_gorilla
ENSGACG00000012232	prpf18	100	89.443	ENSHBUG00000010264	prpf18	100	89.443	Haplochromis_burtoni
ENSGACG00000012232	prpf18	100	81.287	ENSHGLG00000018534	PRPF18	100	81.287	Heterocephalus_glaber_female
ENSGACG00000012232	prpf18	94	82.812	ENSHGLG00100012161	-	98	82.812	Heterocephalus_glaber_male
ENSGACG00000012232	prpf18	100	91.789	ENSHCOG00000015987	prpf18	100	91.789	Hippocampus_comes
ENSGACG00000012232	prpf18	100	80.453	ENSIPUG00000007432	prpf18	100	80.737	Ictalurus_punctatus
ENSGACG00000012232	prpf18	100	80.409	ENSSTOG00000008735	-	100	80.409	Ictidomys_tridecemlineatus
ENSGACG00000012232	prpf18	100	81.871	ENSJJAG00000024041	-	100	81.871	Jaculus_jaculus
ENSGACG00000012232	prpf18	100	62.099	ENSJJAG00000015191	-	100	62.099	Jaculus_jaculus
ENSGACG00000012232	prpf18	100	89.443	ENSKMAG00000012124	prpf18	100	89.443	Kryptolebias_marmoratus
ENSGACG00000012232	prpf18	100	87.390	ENSLBEG00000028466	prpf18	100	87.390	Labrus_bergylta
ENSGACG00000012232	prpf18	100	80.409	ENSLACG00000009885	prpf18	100	80.994	Latimeria_chalumnae
ENSGACG00000012232	prpf18	100	85.088	ENSLOCG00000016736	prpf18	100	85.088	Lepisosteus_oculatus
ENSGACG00000012232	prpf18	100	81.871	ENSLAFG00000007753	-	100	81.871	Loxodonta_africana
ENSGACG00000012232	prpf18	100	81.871	ENSMFAG00000000540	-	100	81.871	Macaca_fascicularis
ENSGACG00000012232	prpf18	100	81.871	ENSMMUG00000015071	PRPF18	93	91.391	Macaca_mulatta
ENSGACG00000012232	prpf18	100	81.871	ENSMNEG00000024679	-	100	81.871	Macaca_nemestrina
ENSGACG00000012232	prpf18	100	66.667	ENSMLEG00000031715	-	100	66.667	Mandrillus_leucophaeus
ENSGACG00000012232	prpf18	100	91.202	ENSMAMG00000006610	prpf18	100	91.202	Mastacembelus_armatus
ENSGACG00000012232	prpf18	100	89.443	ENSMZEG00005019392	prpf18	100	89.443	Maylandia_zebra
ENSGACG00000012232	prpf18	100	80.994	ENSMGAG00000005023	-	100	80.994	Meleagris_gallopavo
ENSGACG00000012232	prpf18	100	82.164	ENSMICG00000006572	-	100	82.164	Microcebus_murinus
ENSGACG00000012232	prpf18	100	81.871	ENSMOCG00000021468	Prpf18	100	81.871	Microtus_ochrogaster
ENSGACG00000012232	prpf18	100	90.909	ENSMMOG00000013012	prpf18	100	90.909	Mola_mola
ENSGACG00000012232	prpf18	99	76.149	ENSMODG00000016902	-	95	76.149	Monodelphis_domestica
ENSGACG00000012232	prpf18	100	75.439	ENSMODG00000024043	-	100	75.439	Monodelphis_domestica
ENSGACG00000012232	prpf18	100	82.899	ENSMALG00000005486	prpf18	100	83.090	Monopterus_albus
ENSGACG00000012232	prpf18	100	81.287	MGP_CAROLIEiJ_G0023143	Prpf18	100	89.041	Mus_caroli
ENSGACG00000012232	prpf18	100	81.579	ENSMUSG00000039449	Prpf18	100	89.041	Mus_musculus
ENSGACG00000012232	prpf18	100	81.579	MGP_PahariEiJ_G0019203	Prpf18	100	89.041	Mus_pahari
ENSGACG00000012232	prpf18	100	81.287	MGP_SPRETEiJ_G0024061	Prpf18	100	89.041	Mus_spretus
ENSGACG00000012232	prpf18	100	80.994	ENSMPUG00000000938	-	100	80.994	Mustela_putorius_furo
ENSGACG00000012232	prpf18	100	80.994	ENSMLUG00000009200	-	100	80.994	Myotis_lucifugus
ENSGACG00000012232	prpf18	100	81.871	ENSNGAG00000012500	-	100	81.871	Nannospalax_galili
ENSGACG00000012232	prpf18	68	80.172	ENSNGAG00000023550	-	83	80.172	Nannospalax_galili
ENSGACG00000012232	prpf18	100	89.736	ENSNBRG00000001778	prpf18	100	89.736	Neolamprologus_brichardi
ENSGACG00000012232	prpf18	100	81.871	ENSNLEG00000012186	-	100	81.871	Nomascus_leucogenys
ENSGACG00000012232	prpf18	76	70.656	ENSMEUG00000005032	-	75	70.656	Notamacropus_eugenii
ENSGACG00000012232	prpf18	77	62.642	ENSOPRG00000002153	-	100	62.642	Ochotona_princeps
ENSGACG00000012232	prpf18	100	81.579	ENSODEG00000003770	-	100	81.579	Octodon_degus
ENSGACG00000012232	prpf18	98	89.521	ENSONIG00000014854	prpf18	96	89.521	Oreochromis_niloticus
ENSGACG00000012232	prpf18	100	82.749	ENSOANG00000015404	-	100	82.749	Ornithorhynchus_anatinus
ENSGACG00000012232	prpf18	100	81.579	ENSOCUG00000027756	-	96	82.263	Oryctolagus_cuniculus
ENSGACG00000012232	prpf18	100	86.857	ENSORLG00000010293	prpf18	100	86.857	Oryzias_latipes
ENSGACG00000012232	prpf18	100	88.856	ENSORLG00020001530	prpf18	100	88.856	Oryzias_latipes_hni
ENSGACG00000012232	prpf18	100	88.563	ENSORLG00015013705	prpf18	100	88.563	Oryzias_latipes_hsok
ENSGACG00000012232	prpf18	100	89.736	ENSOMEG00000009167	prpf18	100	89.736	Oryzias_melastigma
ENSGACG00000012232	prpf18	100	80.994	ENSOGAG00000007294	-	100	80.994	Otolemur_garnettii
ENSGACG00000012232	prpf18	100	79.487	ENSOARG00000006243	-	100	79.487	Ovis_aries
ENSGACG00000012232	prpf18	100	81.871	ENSPPAG00000041959	-	100	81.871	Pan_paniscus
ENSGACG00000012232	prpf18	100	80.994	ENSPPRG00000000107	-	100	80.994	Panthera_pardus
ENSGACG00000012232	prpf18	100	80.994	ENSPTIG00000021094	-	100	80.994	Panthera_tigris_altaica
ENSGACG00000012232	prpf18	100	81.871	ENSPTRG00000002306	PRPF18	100	81.871	Pan_troglodytes
ENSGACG00000012232	prpf18	100	81.579	ENSPANG00000023346	-	100	81.579	Papio_anubis
ENSGACG00000012232	prpf18	86	98.113	ENSPKIG00000014128	prpf18	96	83.476	Paramormyrops_kingsleyae
ENSGACG00000012232	prpf18	100	80.409	ENSPSIG00000016064	-	100	80.409	Pelodiscus_sinensis
ENSGACG00000012232	prpf18	100	83.626	ENSPMGG00000016486	prpf18	100	83.626	Periophthalmus_magnuspinnatus
ENSGACG00000012232	prpf18	100	81.579	ENSPEMG00000013704	Prpf18	100	81.579	Peromyscus_maniculatus_bairdii
ENSGACG00000012232	prpf18	100	72.911	ENSPMAG00000000204	prpf18	100	72.911	Petromyzon_marinus
ENSGACG00000012232	prpf18	92	82.278	ENSPCIG00000012963	-	99	82.278	Phascolarctos_cinereus
ENSGACG00000012232	prpf18	100	86.286	ENSPFOG00000017611	prpf18	100	86.286	Poecilia_formosa
ENSGACG00000012232	prpf18	100	88.270	ENSPLAG00000000369	prpf18	100	88.270	Poecilia_latipinna
ENSGACG00000012232	prpf18	100	88.563	ENSPMEG00000005183	prpf18	100	88.563	Poecilia_mexicana
ENSGACG00000012232	prpf18	100	88.270	ENSPREG00000015232	prpf18	100	88.270	Poecilia_reticulata
ENSGACG00000012232	prpf18	100	81.579	ENSPPYG00000002101	PRPF18	100	81.579	Pongo_abelii
ENSGACG00000012232	prpf18	100	64.035	ENSPCAG00000010833	-	100	64.035	Procavia_capensis
ENSGACG00000012232	prpf18	100	76.901	ENSPCOG00000013057	-	100	76.901	Propithecus_coquereli
ENSGACG00000012232	prpf18	100	50.877	ENSPVAG00000002947	-	100	50.877	Pteropus_vampyrus
ENSGACG00000012232	prpf18	100	89.736	ENSPNYG00000003554	prpf18	100	89.736	Pundamilia_nyererei
ENSGACG00000012232	prpf18	100	84.330	ENSPNAG00000023151	prpf18	100	84.330	Pygocentrus_nattereri
ENSGACG00000012232	prpf18	100	82.164	ENSRNOG00000018396	Prpf18	100	82.164	Rattus_norvegicus
ENSGACG00000012232	prpf18	100	82.164	ENSRBIG00000028028	-	100	82.164	Rhinopithecus_bieti
ENSGACG00000012232	prpf18	100	81.871	ENSRROG00000040695	-	100	81.871	Rhinopithecus_roxellana
ENSGACG00000012232	prpf18	100	81.579	ENSSBOG00000034482	-	100	81.579	Saimiri_boliviensis_boliviensis
ENSGACG00000012232	prpf18	100	83.041	ENSSHAG00000016463	-	100	83.041	Sarcophilus_harrisii
ENSGACG00000012232	prpf18	100	69.883	ENSSHAG00000009669	-	100	69.883	Sarcophilus_harrisii
ENSGACG00000012232	prpf18	98	81.159	ENSSFOG00015022118	prpf18	100	77.522	Scleropages_formosus
ENSGACG00000012232	prpf18	77	44.697	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSGACG00000012232	prpf18	100	92.082	ENSSMAG00000005308	prpf18	100	92.082	Scophthalmus_maximus
ENSGACG00000012232	prpf18	100	93.548	ENSSDUG00000015428	prpf18	100	93.548	Seriola_dumerili
ENSGACG00000012232	prpf18	100	93.842	ENSSLDG00000023989	prpf18	100	93.842	Seriola_lalandi_dorsalis
ENSGACG00000012232	prpf18	100	53.801	ENSSARG00000005307	-	100	53.801	Sorex_araneus
ENSGACG00000012232	prpf18	100	81.579	ENSSPUG00000002619	-	100	81.579	Sphenodon_punctatus
ENSGACG00000012232	prpf18	100	92.962	ENSSPAG00000019502	prpf18	100	92.962	Stegastes_partitus
ENSGACG00000012232	prpf18	100	81.287	ENSSSCG00000026354	-	100	81.287	Sus_scrofa
ENSGACG00000012232	prpf18	100	79.532	ENSTGUG00000002286	-	100	79.532	Taeniopygia_guttata
ENSGACG00000012232	prpf18	100	87.097	ENSTRUG00000011278	prpf18	100	87.097	Takifugu_rubripes
ENSGACG00000012232	prpf18	100	86.804	ENSTNIG00000000911	prpf18	100	86.804	Tetraodon_nigroviridis
ENSGACG00000012232	prpf18	79	97.436	ENSTBEG00000013011	-	79	97.436	Tupaia_belangeri
ENSGACG00000012232	prpf18	100	82.164	ENSTTRG00000011117	PRPF18	100	82.164	Tursiops_truncatus
ENSGACG00000012232	prpf18	91	83.601	ENSUAMG00000001815	-	93	83.601	Ursus_americanus
ENSGACG00000012232	prpf18	100	76.608	ENSUMAG00000012329	-	100	76.608	Ursus_maritimus
ENSGACG00000012232	prpf18	100	75.731	ENSVPAG00000011486	-	100	75.731	Vicugna_pacos
ENSGACG00000012232	prpf18	100	81.287	ENSVVUG00000005453	-	100	81.287	Vulpes_vulpes
ENSGACG00000012232	prpf18	100	73.913	ENSXETG00000024057	prpf18	100	73.913	Xenopus_tropicalis
ENSGACG00000012232	prpf18	100	88.338	ENSXCOG00000020414	prpf18	100	88.338	Xiphophorus_couchianus
ENSGACG00000012232	prpf18	100	88.856	ENSXMAG00000004713	prpf18	91	88.856	Xiphophorus_maculatus