EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000012293 (Gene tree)
Gene ID: -
Gene Symbol: prdm10
Alias: si:ch211-151h10.3
Full Name: PR domain containing 10
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 8774 bases
Position: chrgroupI:15505384-15514157
Accession: ZDB-GENE-050419-74
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016253	zf-C2H2	PF00096.26	1.1e-27	1	5
ENSGACP00000016253	zf-C2H2	PF00096.26	1.1e-27	2	5
ENSGACP00000016253	zf-C2H2	PF00096.26	1.1e-27	3	5
ENSGACP00000016253	zf-C2H2	PF00096.26	1.1e-27	4	5
ENSGACP00000016253	zf-C2H2	PF00096.26	1.1e-27	5	5
ENSGACP00000016253	zf-met	PF12874.7	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016285	-	3387	-	ENSGACP00000016253	1129 (aa)	-	G3PF79

Gene Model

Click here to download ENSGACG00000012293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000012293	prdm10	55	33.696	ENSGACG00000005553	znf236	99	30.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012293	prdm10	99	67.901	ENSG00000170325	PRDM10	98	63.877	Homo_sapiens
ENSGACG00000012293	prdm10	99	67.532	ENSAMEG00000002425	PRDM10	89	67.532	Ailuropoda_melanoleuca
ENSGACG00000012293	prdm10	98	72.840	ENSAPLG00000004858	PRDM10	93	72.840	Anas_platyrhynchos
ENSGACG00000012293	prdm10	98	67.901	ENSANAG00000022064	PRDM10	91	67.901	Aotus_nancymaae
ENSGACG00000012293	prdm10	99	65.432	ENSBTAG00000019001	PRDM10	92	65.432	Bos_taurus
ENSGACG00000012293	prdm10	98	67.901	ENSCJAG00000009235	PRDM10	98	61.708	Callithrix_jacchus
ENSGACG00000012293	prdm10	98	67.949	ENSCAFG00000010164	PRDM10	98	62.037	Canis_familiaris
ENSGACG00000012293	prdm10	98	67.949	ENSCAFG00020010152	PRDM10	98	65.153	Canis_lupus_dingo
ENSGACG00000012293	prdm10	99	65.432	ENSCHIG00000026530	PRDM10	98	60.119	Capra_hircus
ENSGACG00000012293	prdm10	99	67.901	ENSTSYG00000000544	PRDM10	92	67.901	Carlito_syrichta
ENSGACG00000012293	prdm10	99	56.021	ENSCAPG00000017296	PRDM10	98	60.000	Cavia_aperea
ENSGACG00000012293	prdm10	99	57.205	ENSCPOG00000000389	PRDM10	98	61.585	Cavia_porcellus
ENSGACG00000012293	prdm10	99	67.901	ENSCCAG00000024567	PRDM10	92	67.901	Cebus_capucinus
ENSGACG00000012293	prdm10	99	67.901	ENSCATG00000040031	PRDM10	92	67.901	Cercocebus_atys
ENSGACG00000012293	prdm10	100	63.724	ENSCLAG00000014605	PRDM10	99	64.948	Chinchilla_lanigera
ENSGACG00000012293	prdm10	99	67.901	ENSCSAG00000002202	PRDM10	92	67.901	Chlorocebus_sabaeus
ENSGACG00000012293	prdm10	98	73.750	ENSCPBG00000026880	PRDM10	88	73.750	Chrysemys_picta_bellii
ENSGACG00000012293	prdm10	99	67.901	ENSCANG00000032669	PRDM10	92	67.901	Colobus_angolensis_palliatus
ENSGACG00000012293	prdm10	99	67.949	ENSCGRG00001021647	Prdm10	99	64.655	Cricetulus_griseus_chok1gshd
ENSGACG00000012293	prdm10	99	67.949	ENSCGRG00000006562	Prdm10	99	64.655	Cricetulus_griseus_crigri
ENSGACG00000012293	prdm10	79	69.136	ENSDNOG00000001366	PRDM10	86	69.324	Dasypus_novemcinctus
ENSGACG00000012293	prdm10	100	60.601	ENSDORG00000014292	Prdm10	98	61.853	Dipodomys_ordii
ENSGACG00000012293	prdm10	98	66.667	ENSEASG00005022914	PRDM10	99	65.301	Equus_asinus_asinus
ENSGACG00000012293	prdm10	98	66.667	ENSECAG00000011499	PRDM10	99	64.834	Equus_caballus
ENSGACG00000012293	prdm10	98	66.667	ENSFCAG00000004111	PRDM10	90	66.667	Felis_catus
ENSGACG00000012293	prdm10	98	66.667	ENSFALG00000004873	PRDM10	89	66.635	Ficedula_albicollis
ENSGACG00000012293	prdm10	99	67.949	ENSFDAG00000017311	PRDM10	99	64.435	Fukomys_damarensis
ENSGACG00000012293	prdm10	98	70.000	ENSGALG00000033660	PRDM10	91	71.605	Gallus_gallus
ENSGACG00000012293	prdm10	98	72.840	ENSGAGG00000012523	PRDM10	91	72.840	Gopherus_agassizii
ENSGACG00000012293	prdm10	99	67.901	ENSGGOG00000015359	PRDM10	92	67.901	Gorilla_gorilla
ENSGACG00000012293	prdm10	100	63.874	ENSHGLG00000001106	PRDM10	99	65.096	Heterocephalus_glaber_female
ENSGACG00000012293	prdm10	100	63.874	ENSHGLG00100002350	PRDM10	99	65.096	Heterocephalus_glaber_male
ENSGACG00000012293	prdm10	98	67.901	ENSSTOG00000002015	PRDM10	98	59.834	Ictidomys_tridecemlineatus
ENSGACG00000012293	prdm10	91	62.487	ENSJJAG00000021493	Prdm10	88	63.988	Jaculus_jaculus
ENSGACG00000012293	prdm10	98	65.432	ENSLAFG00000031867	PRDM10	98	60.799	Loxodonta_africana
ENSGACG00000012293	prdm10	99	67.901	ENSMFAG00000031008	PRDM10	92	67.901	Macaca_fascicularis
ENSGACG00000012293	prdm10	99	67.901	ENSMMUG00000017555	PRDM10	92	67.901	Macaca_mulatta
ENSGACG00000012293	prdm10	99	67.901	ENSMNEG00000036493	PRDM10	92	67.901	Macaca_nemestrina
ENSGACG00000012293	prdm10	95	67.901	ENSMLEG00000042028	PRDM10	91	67.901	Mandrillus_leucophaeus
ENSGACG00000012293	prdm10	98	70.000	ENSMGAG00000001112	PRDM10	89	70.000	Meleagris_gallopavo
ENSGACG00000012293	prdm10	99	67.901	ENSMICG00000013888	PRDM10	92	67.901	Microcebus_murinus
ENSGACG00000012293	prdm10	99	67.949	ENSMOCG00000021853	Prdm10	99	65.066	Microtus_ochrogaster
ENSGACG00000012293	prdm10	81	64.369	ENSMODG00000004979	PRDM10	99	64.263	Monodelphis_domestica
ENSGACG00000012293	prdm10	99	67.949	ENSMUSG00000042496	Prdm10	98	65.281	Mus_musculus
ENSGACG00000012293	prdm10	99	67.949	MGP_SPRETEiJ_G0033061	-	98	65.221	Mus_spretus
ENSGACG00000012293	prdm10	98	67.901	ENSMPUG00000008711	PRDM10	91	67.901	Mustela_putorius_furo
ENSGACG00000012293	prdm10	98	69.136	ENSMLUG00000013051	PRDM10	92	69.136	Myotis_lucifugus
ENSGACG00000012293	prdm10	100	59.117	ENSNGAG00000000580	Prdm10	98	60.783	Nannospalax_galili
ENSGACG00000012293	prdm10	99	67.901	ENSNLEG00000007488	PRDM10	98	61.929	Nomascus_leucogenys
ENSGACG00000012293	prdm10	100	63.430	ENSODEG00000005309	PRDM10	99	64.829	Octodon_degus
ENSGACG00000012293	prdm10	68	63.158	ENSOANG00000000577	-	92	62.322	Ornithorhynchus_anatinus
ENSGACG00000012293	prdm10	98	64.265	ENSOCUG00000003736	PRDM10	98	60.283	Oryctolagus_cuniculus
ENSGACG00000012293	prdm10	99	66.667	ENSOGAG00000010723	PRDM10	92	66.667	Otolemur_garnettii
ENSGACG00000012293	prdm10	99	65.432	ENSOARG00000014507	PRDM10	92	65.432	Ovis_aries
ENSGACG00000012293	prdm10	99	67.901	ENSPPAG00000042881	PRDM10	92	67.901	Pan_paniscus
ENSGACG00000012293	prdm10	99	66.667	ENSPPRG00000007002	PRDM10	92	66.667	Panthera_pardus
ENSGACG00000012293	prdm10	99	66.667	ENSPTIG00000013331	PRDM10	92	66.667	Panthera_tigris_altaica
ENSGACG00000012293	prdm10	99	67.901	ENSPTRG00000004477	PRDM10	92	67.901	Pan_troglodytes
ENSGACG00000012293	prdm10	99	67.901	ENSPANG00000017470	PRDM10	92	67.901	Papio_anubis
ENSGACG00000012293	prdm10	98	67.949	ENSPEMG00000014985	Prdm10	99	64.675	Peromyscus_maniculatus_bairdii
ENSGACG00000012293	prdm10	99	67.901	ENSPPYG00000004061	PRDM10	92	67.901	Pongo_abelii
ENSGACG00000012293	prdm10	90	66.071	ENSPCAG00000014514	PRDM10	92	66.071	Procavia_capensis
ENSGACG00000012293	prdm10	98	67.901	ENSPCOG00000023406	PRDM10	91	67.901	Propithecus_coquereli
ENSGACG00000012293	prdm10	98	66.667	ENSPVAG00000012764	PRDM10	92	66.667	Pteropus_vampyrus
ENSGACG00000012293	prdm10	100	59.083	ENSRNOG00000007853	Prdm10	98	60.833	Rattus_norvegicus
ENSGACG00000012293	prdm10	99	67.901	ENSRBIG00000030924	PRDM10	98	61.929	Rhinopithecus_bieti
ENSGACG00000012293	prdm10	99	67.901	ENSRROG00000034334	PRDM10	92	67.901	Rhinopithecus_roxellana
ENSGACG00000012293	prdm10	99	67.901	ENSSBOG00000008773	PRDM10	92	67.901	Saimiri_boliviensis_boliviensis
ENSGACG00000012293	prdm10	98	70.370	ENSSHAG00000004503	PRDM10	92	70.370	Sarcophilus_harrisii
ENSGACG00000012293	prdm10	69	88.462	ENSSARG00000013953	-	62	88.462	Sorex_araneus
ENSGACG00000012293	prdm10	100	62.489	ENSSPUG00000001178	PRDM10	97	62.458	Sphenodon_punctatus
ENSGACG00000012293	prdm10	98	66.667	ENSSSCG00000015243	PRDM10	92	66.667	Sus_scrofa
ENSGACG00000012293	prdm10	98	67.470	ENSTGUG00000000530	PRDM10	92	67.470	Taeniopygia_guttata
ENSGACG00000012293	prdm10	85	78.571	ENSTBEG00000007221	PRDM10	86	69.550	Tupaia_belangeri
ENSGACG00000012293	prdm10	99	63.233	ENSTTRG00000009189	PRDM10	92	62.963	Tursiops_truncatus
ENSGACG00000012293	prdm10	90	65.433	ENSUAMG00000018832	PRDM10	94	66.764	Ursus_americanus
ENSGACG00000012293	prdm10	98	64.935	ENSUMAG00000003167	PRDM10	99	64.768	Ursus_maritimus
ENSGACG00000012293	prdm10	98	67.901	ENSVVUG00000019878	PRDM10	92	67.901	Vulpes_vulpes
ENSGACG00000012293	prdm10	96	70.492	ENSXETG00000032173	PRDM10	87	70.492	Xenopus_tropicalis