EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000012307 (Gene tree)
Gene ID: -
Gene Symbol: apex2
Alias: zgc:55889
Full Name: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2858 bases
Position: chrgroupXII:16078499-16081356
Accession: ZDB-GENE-040426-835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016267	Exo_endo_phos	PF03372.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016299	-	1134	-	ENSGACP00000016267	377 (aa)	-	G3PF93

Gene Model

Click here to download ENSGACG00000012307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012307	apex2	91	89.143	ENSAPOG00000005805	apex2	65	89.143	Acanthochromis_polyacanthus
ENSGACG00000012307	apex2	81	60.622	ENSAMEG00000003608	APEX2	60	61.905	Ailuropoda_melanoleuca
ENSGACG00000012307	apex2	91	87.429	ENSACIG00000010000	apex2	65	87.429	Amphilophus_citrinellus
ENSGACG00000012307	apex2	91	89.143	ENSAOCG00000021774	apex2	65	89.143	Amphiprion_ocellaris
ENSGACG00000012307	apex2	91	88.571	ENSAPEG00000020890	apex2	62	88.571	Amphiprion_percula
ENSGACG00000012307	apex2	92	87.151	ENSATEG00000023600	apex2	66	89.143	Anabas_testudineus
ENSGACG00000012307	apex2	83	67.232	ENSACAG00000011201	APEX2	55	67.797	Anolis_carolinensis
ENSGACG00000012307	apex2	84	60.104	ENSANAG00000021907	-	61	61.376	Aotus_nancymaae
ENSGACG00000012307	apex2	82	78.212	ENSAMXG00000007422	apex2	59	80.000	Astyanax_mexicanus
ENSGACG00000012307	apex2	93	61.658	ENSBTAG00000013177	APEX2	60	62.963	Bos_taurus
ENSGACG00000012307	apex2	81	60.104	ENSCJAG00000016584	APEX2	61	61.376	Callithrix_jacchus
ENSGACG00000012307	apex2	84	58.031	ENSCAFG00000014310	APEX2	60	59.259	Canis_familiaris
ENSGACG00000012307	apex2	84	60.622	ENSCAFG00020013818	APEX2	79	61.376	Canis_lupus_dingo
ENSGACG00000012307	apex2	93	62.176	ENSCHIG00000019916	APEX2	60	63.492	Capra_hircus
ENSGACG00000012307	apex2	81	60.104	ENSTSYG00000005612	APEX2	61	61.376	Carlito_syrichta
ENSGACG00000012307	apex2	67	59.585	ENSCPOG00000007265	APEX2	51	60.847	Cavia_porcellus
ENSGACG00000012307	apex2	81	59.067	ENSCATG00000044854	APEX2	61	60.317	Cercocebus_atys
ENSGACG00000012307	apex2	82	59.067	ENSCLAG00000017315	APEX2	61	60.317	Chinchilla_lanigera
ENSGACG00000012307	apex2	81	59.585	ENSCSAG00000012124	APEX2	61	60.847	Chlorocebus_sabaeus
ENSGACG00000012307	apex2	71	59.341	ENSCPBG00000016631	APEX2	62	61.582	Chrysemys_picta_bellii
ENSGACG00000012307	apex2	67	56.164	ENSCSAVG00000006052	-	54	56.354	Ciona_savignyi
ENSGACG00000012307	apex2	81	59.585	ENSCANG00000003053	APEX2	61	60.847	Colobus_angolensis_palliatus
ENSGACG00000012307	apex2	81	60.417	ENSCGRG00001008132	Apex2	61	61.702	Cricetulus_griseus_chok1gshd
ENSGACG00000012307	apex2	81	60.417	ENSCGRG00000009667	Apex2	77	61.702	Cricetulus_griseus_crigri
ENSGACG00000012307	apex2	92	87.151	ENSCSEG00000019900	apex2	65	89.143	Cynoglossus_semilaevis
ENSGACG00000012307	apex2	91	86.286	ENSCVAG00000021583	apex2	66	86.286	Cyprinodon_variegatus
ENSGACG00000012307	apex2	92	77.095	ENSDARG00000008472	apex2	65	78.857	Danio_rerio
ENSGACG00000012307	apex2	80	60.317	ENSDNOG00000038901	APEX2	61	60.317	Dasypus_novemcinctus
ENSGACG00000012307	apex2	65	64.516	ENSEBUG00000015654	apex2	53	65.385	Eptatretus_burgeri
ENSGACG00000012307	apex2	81	61.979	ENSEASG00005011694	APEX2	55	63.298	Equus_asinus_asinus
ENSGACG00000012307	apex2	81	61.979	ENSECAG00000026921	APEX2	55	63.298	Equus_caballus
ENSGACG00000012307	apex2	64	67.742	ENSEEUG00000013172	APEX2	60	61.376	Erinaceus_europaeus
ENSGACG00000012307	apex2	100	83.333	ENSELUG00000021417	apex2	66	85.227	Esox_lucius
ENSGACG00000012307	apex2	84	60.104	ENSFCAG00000021990	APEX2	61	61.376	Felis_catus
ENSGACG00000012307	apex2	83	60.104	ENSFDAG00000008076	APEX2	80	60.847	Fukomys_damarensis
ENSGACG00000012307	apex2	85	78.621	ENSFHEG00000021411	apex2	60	78.621	Fundulus_heteroclitus
ENSGACG00000012307	apex2	100	66.057	ENSGMOG00000019681	apex2	100	66.057	Gadus_morhua
ENSGACG00000012307	apex2	91	88.000	ENSGAFG00000005829	apex2	67	88.000	Gambusia_affinis
ENSGACG00000012307	apex2	76	58.268	ENSGAGG00000011520	APEX2	52	60.656	Gopherus_agassizii
ENSGACG00000012307	apex2	64	60.104	ENSGGOG00000002056	APEX2	61	61.376	Gorilla_gorilla
ENSGACG00000012307	apex2	91	84.571	ENSHBUG00000009938	apex2	65	84.571	Haplochromis_burtoni
ENSGACG00000012307	apex2	81	60.104	ENSHGLG00000000273	APEX2	81	61.376	Heterocephalus_glaber_female
ENSGACG00000012307	apex2	90	79.888	ENSHCOG00000010165	apex2	65	81.143	Hippocampus_comes
ENSGACG00000012307	apex2	66	82.184	ENSIPUG00000000352	APEX2	66	82.184	Ictalurus_punctatus
ENSGACG00000012307	apex2	64	61.290	ENSSTOG00000025121	APEX2	77	61.376	Ictidomys_tridecemlineatus
ENSGACG00000012307	apex2	81	60.417	ENSJJAG00000019611	Apex2	81	61.702	Jaculus_jaculus
ENSGACG00000012307	apex2	92	85.475	ENSKMAG00000006985	apex2	65	87.429	Kryptolebias_marmoratus
ENSGACG00000012307	apex2	100	66.540	ENSLBEG00000012139	apex2	64	90.286	Labrus_bergylta
ENSGACG00000012307	apex2	94	51.309	ENSLACG00000000865	APEX2	57	53.030	Latimeria_chalumnae
ENSGACG00000012307	apex2	89	81.714	ENSLOCG00000014467	apex2	69	81.714	Lepisosteus_oculatus
ENSGACG00000012307	apex2	86	60.622	ENSLAFG00000018312	APEX2	60	61.376	Loxodonta_africana
ENSGACG00000012307	apex2	85	59.585	ENSMMUG00000008428	APEX2	59	60.847	Macaca_mulatta
ENSGACG00000012307	apex2	81	59.067	ENSMLEG00000028208	APEX2	61	60.317	Mandrillus_leucophaeus
ENSGACG00000012307	apex2	91	88.571	ENSMAMG00000024220	apex2	66	88.571	Mastacembelus_armatus
ENSGACG00000012307	apex2	91	84.571	ENSMZEG00005026322	apex2	65	84.571	Maylandia_zebra
ENSGACG00000012307	apex2	81	56.477	ENSMICG00000043181	APEX2	61	57.672	Microcebus_murinus
ENSGACG00000012307	apex2	64	62.903	ENSMOCG00000004339	Apex2	79	61.170	Microtus_ochrogaster
ENSGACG00000012307	apex2	100	80.296	ENSMMOG00000017340	apex2	67	89.714	Mola_mola
ENSGACG00000012307	apex2	84	63.889	ENSMODG00000005341	APEX2	57	65.341	Monodelphis_domestica
ENSGACG00000012307	apex2	91	79.429	ENSMALG00000014179	apex2	65	79.429	Monopterus_albus
ENSGACG00000012307	apex2	97	51.154	MGP_CAROLIEiJ_G0033484	Apex2	76	61.702	Mus_caroli
ENSGACG00000012307	apex2	81	60.417	ENSMUSG00000025269	Apex2	76	61.702	Mus_musculus
ENSGACG00000012307	apex2	81	60.417	MGP_PahariEiJ_G0032023	Apex2	83	61.170	Mus_pahari
ENSGACG00000012307	apex2	97	51.154	MGP_SPRETEiJ_G0034654	Apex2	76	61.702	Mus_spretus
ENSGACG00000012307	apex2	81	61.140	ENSMPUG00000003293	APEX2	60	62.434	Mustela_putorius_furo
ENSGACG00000012307	apex2	81	61.053	ENSMLUG00000016298	-	60	62.366	Myotis_lucifugus
ENSGACG00000012307	apex2	81	60.526	ENSMLUG00000004562	-	60	61.828	Myotis_lucifugus
ENSGACG00000012307	apex2	81	61.458	ENSNGAG00000013576	Apex2	61	62.766	Nannospalax_galili
ENSGACG00000012307	apex2	91	83.429	ENSNBRG00000010099	apex2	65	83.429	Neolamprologus_brichardi
ENSGACG00000012307	apex2	99	43.914	ENSNLEG00000032067	-	99	43.914	Nomascus_leucogenys
ENSGACG00000012307	apex2	91	84.571	ENSONIG00000016881	apex2	65	84.571	Oreochromis_niloticus
ENSGACG00000012307	apex2	79	73.050	ENSOANG00000000689	-	52	75.182	Ornithorhynchus_anatinus
ENSGACG00000012307	apex2	81	58.031	ENSOCUG00000000570	APEX2	61	59.259	Oryctolagus_cuniculus
ENSGACG00000012307	apex2	93	84.444	ENSORLG00000014053	apex2	66	86.364	Oryzias_latipes
ENSGACG00000012307	apex2	93	83.333	ENSORLG00020013253	apex2	66	85.227	Oryzias_latipes_hni
ENSGACG00000012307	apex2	93	83.889	ENSORLG00015007515	apex2	66	85.795	Oryzias_latipes_hsok
ENSGACG00000012307	apex2	100	66.667	ENSOMEG00000003655	apex2	65	89.205	Oryzias_melastigma
ENSGACG00000012307	apex2	81	60.104	ENSOGAG00000007797	APEX2	61	61.376	Otolemur_garnettii
ENSGACG00000012307	apex2	93	62.176	ENSOARG00000005742	APEX2	60	63.492	Ovis_aries
ENSGACG00000012307	apex2	81	60.622	ENSPPAG00000035747	APEX2	61	61.905	Pan_paniscus
ENSGACG00000012307	apex2	96	60.104	ENSPPRG00000002440	APEX2	61	61.376	Panthera_pardus
ENSGACG00000012307	apex2	96	59.067	ENSPTIG00000021651	APEX2	61	60.317	Panthera_tigris_altaica
ENSGACG00000012307	apex2	81	60.622	ENSPTRG00000021946	APEX2	61	61.905	Pan_troglodytes
ENSGACG00000012307	apex2	81	59.067	ENSPANG00000003595	APEX2	61	60.317	Papio_anubis
ENSGACG00000012307	apex2	94	78.771	ENSPKIG00000007752	apex2	59	80.571	Paramormyrops_kingsleyae
ENSGACG00000012307	apex2	93	82.123	ENSPMGG00000009151	apex2	66	84.000	Periophthalmus_magnuspinnatus
ENSGACG00000012307	apex2	81	59.375	ENSPEMG00000016475	Apex2	77	60.638	Peromyscus_maniculatus_bairdii
ENSGACG00000012307	apex2	64	68.254	ENSPCIG00000007633	APEX2	56	65.341	Phascolarctos_cinereus
ENSGACG00000012307	apex2	89	87.151	ENSPFOG00000000408	apex2	65	89.143	Poecilia_formosa
ENSGACG00000012307	apex2	89	87.151	ENSPLAG00000023814	apex2	65	89.143	Poecilia_latipinna
ENSGACG00000012307	apex2	89	87.151	ENSPMEG00000023222	apex2	65	89.143	Poecilia_mexicana
ENSGACG00000012307	apex2	81	60.104	ENSPCOG00000016083	APEX2	61	61.376	Propithecus_coquereli
ENSGACG00000012307	apex2	81	67.647	ENSPVAG00000007851	APEX2	56	67.647	Pteropus_vampyrus
ENSGACG00000012307	apex2	91	84.000	ENSPNYG00000015698	apex2	65	84.000	Pundamilia_nyererei
ENSGACG00000012307	apex2	94	52.632	ENSRNOG00000000166	Apex2	61	61.702	Rattus_norvegicus
ENSGACG00000012307	apex2	81	59.585	ENSRBIG00000036500	APEX2	61	60.847	Rhinopithecus_bieti
ENSGACG00000012307	apex2	64	39.130	YBL019W	APN2	50	39.130	Saccharomyces_cerevisiae
ENSGACG00000012307	apex2	64	60.104	ENSSBOG00000030500	-	61	61.376	Saimiri_boliviensis_boliviensis
ENSGACG00000012307	apex2	80	49.080	ENSSBOG00000003489	-	55	50.314	Saimiri_boliviensis_boliviensis
ENSGACG00000012307	apex2	93	65.556	ENSSHAG00000007846	APEX2	60	67.045	Sarcophilus_harrisii
ENSGACG00000012307	apex2	91	82.857	ENSSFOG00015010354	apex2	65	82.857	Scleropages_formosus
ENSGACG00000012307	apex2	97	85.475	ENSSMAG00000012753	apex2	70	87.429	Scophthalmus_maximus
ENSGACG00000012307	apex2	92	88.827	ENSSDUG00000022892	apex2	65	90.341	Seriola_dumerili
ENSGACG00000012307	apex2	92	89.385	ENSSLDG00000024347	apex2	66	90.909	Seriola_lalandi_dorsalis
ENSGACG00000012307	apex2	91	88.571	ENSSPAG00000016279	apex2	65	88.571	Stegastes_partitus
ENSGACG00000012307	apex2	85	60.104	ENSSSCG00000012348	-	60	61.376	Sus_scrofa
ENSGACG00000012307	apex2	90	84.000	ENSTRUG00000015660	apex2	65	84.000	Takifugu_rubripes
ENSGACG00000012307	apex2	69	76.042	ENSTNIG00000003725	apex2	58	81.111	Tetraodon_nigroviridis
ENSGACG00000012307	apex2	81	61.140	ENSUAMG00000004720	APEX2	79	61.905	Ursus_americanus
ENSGACG00000012307	apex2	63	61.290	ENSUMAG00000002892	APEX2	59	56.383	Ursus_maritimus
ENSGACG00000012307	apex2	84	60.622	ENSVVUG00000005989	APEX2	60	61.905	Vulpes_vulpes
ENSGACG00000012307	apex2	94	58.333	ENSXETG00000022026	apex2	56	60.000	Xenopus_tropicalis
ENSGACG00000012307	apex2	88	88.571	ENSXMAG00000025740	apex2	65	88.571	Xiphophorus_maculatus