EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000012471 (Gene tree)
Gene ID: -
Gene Symbol: trmt6
Alias: zgc:123193
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4305 bases
Position: chrgroupXVIII:14055659-14059963
Accession: ZDB-GENE-051120-141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016492	Gcd10p	PF04189.13	8.1e-68	1	1
ENSGACP00000016486	Gcd10p	PF04189.13	1.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016525	-	1512	-	ENSGACP00000016492	457 (aa)	-	G3PFW8
ENSGACT00000016519	-	1567	-	ENSGACP00000016486	473 (aa)	-	G3PFW2

Gene Model

Click here to download ENSGACG00000012471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012471	trmt6	93	58.537	ENSG00000089195	TRMT6	90	58.537	Homo_sapiens
ENSGACG00000012471	trmt6	99	78.252	ENSAPOG00000008036	trmt6	99	78.252	Acanthochromis_polyacanthus
ENSGACG00000012471	trmt6	93	57.301	ENSAMEG00000010635	TRMT6	90	57.301	Ailuropoda_melanoleuca
ENSGACG00000012471	trmt6	98	75.112	ENSACIG00000004608	trmt6	99	75.112	Amphilophus_citrinellus
ENSGACG00000012471	trmt6	98	78.924	ENSAOCG00000024322	trmt6	99	78.924	Amphiprion_ocellaris
ENSGACG00000012471	trmt6	99	78.846	ENSAPEG00000017334	trmt6	99	78.846	Amphiprion_percula
ENSGACG00000012471	trmt6	92	75.973	ENSATEG00000018498	trmt6	96	77.030	Anabas_testudineus
ENSGACG00000012471	trmt6	92	57.080	ENSAPLG00000007761	TRMT6	98	57.301	Anas_platyrhynchos
ENSGACG00000012471	trmt6	98	54.470	ENSACAG00000000575	TRMT6	99	54.545	Anolis_carolinensis
ENSGACG00000012471	trmt6	93	57.965	ENSANAG00000021260	TRMT6	96	54.906	Aotus_nancymaae
ENSGACG00000012471	trmt6	99	73.561	ENSACLG00000026034	trmt6	98	73.561	Astatotilapia_calliptera
ENSGACG00000012471	trmt6	97	67.756	ENSAMXG00000017116	trmt6	95	67.756	Astyanax_mexicanus
ENSGACG00000012471	trmt6	92	57.942	ENSBTAG00000001314	TRMT6	89	57.942	Bos_taurus
ENSGACG00000012471	trmt6	92	30.501	WBGene00014120	ZK858.7	93	31.442	Caenorhabditis_elegans
ENSGACG00000012471	trmt6	93	57.965	ENSCJAG00000021296	TRMT6	96	54.906	Callithrix_jacchus
ENSGACG00000012471	trmt6	93	57.238	ENSCAFG00000005969	TRMT6	90	57.399	Canis_familiaris
ENSGACG00000012471	trmt6	93	57.016	ENSCAFG00020000777	TRMT6	90	57.175	Canis_lupus_dingo
ENSGACG00000012471	trmt6	92	57.942	ENSCHIG00000010338	TRMT6	89	57.942	Capra_hircus
ENSGACG00000012471	trmt6	92	58.613	ENSTSYG00000004286	TRMT6	89	58.705	Carlito_syrichta
ENSGACG00000012471	trmt6	84	55.610	ENSCAPG00000015467	TRMT6	92	55.392	Cavia_aperea
ENSGACG00000012471	trmt6	97	56.290	ENSCPOG00000013809	TRMT6	94	56.290	Cavia_porcellus
ENSGACG00000012471	trmt6	96	54.906	ENSCCAG00000026939	TRMT6	96	54.906	Cebus_capucinus
ENSGACG00000012471	trmt6	97	56.667	ENSCATG00000041111	TRMT6	95	56.667	Cercocebus_atys
ENSGACG00000012471	trmt6	89	57.639	ENSCLAG00000013978	TRMT6	86	57.407	Chinchilla_lanigera
ENSGACG00000012471	trmt6	97	56.667	ENSCSAG00000013461	TRMT6	95	56.667	Chlorocebus_sabaeus
ENSGACG00000012471	trmt6	73	47.802	ENSCHOG00000012537	TRMT6	71	47.802	Choloepus_hoffmanni
ENSGACG00000012471	trmt6	97	56.871	ENSCPBG00000023406	TRMT6	97	57.294	Chrysemys_picta_bellii
ENSGACG00000012471	trmt6	93	37.838	ENSCING00000002472	-	96	37.442	Ciona_intestinalis
ENSGACG00000012471	trmt6	90	41.043	ENSCSAVG00000001680	-	94	40.488	Ciona_savignyi
ENSGACG00000012471	trmt6	97	56.667	ENSCANG00000002381	TRMT6	95	56.667	Colobus_angolensis_palliatus
ENSGACG00000012471	trmt6	92	59.243	ENSCGRG00001003385	Trmt6	89	59.202	Cricetulus_griseus_chok1gshd
ENSGACG00000012471	trmt6	92	59.243	ENSCGRG00000006540	Trmt6	89	59.202	Cricetulus_griseus_crigri
ENSGACG00000012471	trmt6	99	73.774	ENSCSEG00000002228	trmt6	99	73.932	Cynoglossus_semilaevis
ENSGACG00000012471	trmt6	99	72.708	ENSCVAG00000000341	trmt6	99	72.708	Cyprinodon_variegatus
ENSGACG00000012471	trmt6	100	68.817	ENSDARG00000042344	trmt6	100	68.817	Danio_rerio
ENSGACG00000012471	trmt6	95	56.559	ENSDNOG00000012785	TRMT6	91	56.769	Dasypus_novemcinctus
ENSGACG00000012471	trmt6	97	56.250	ENSDORG00000006458	Trmt6	95	56.485	Dipodomys_ordii
ENSGACG00000012471	trmt6	93	31.343	FBgn0031832	CG9596	96	30.702	Drosophila_melanogaster
ENSGACG00000012471	trmt6	56	35.581	ENSETEG00000017282	-	78	35.581	Echinops_telfairi
ENSGACG00000012471	trmt6	97	58.297	ENSEASG00005001411	TRMT6	95	59.050	Equus_asinus_asinus
ENSGACG00000012471	trmt6	93	58.389	ENSECAG00000023914	TRMT6	90	58.389	Equus_caballus
ENSGACG00000012471	trmt6	96	55.649	ENSEEUG00000006635	TRMT6	95	55.765	Erinaceus_europaeus
ENSGACG00000012471	trmt6	98	74.273	ENSELUG00000013378	trmt6	80	74.273	Esox_lucius
ENSGACG00000012471	trmt6	93	58.000	ENSFCAG00000003102	TRMT6	90	58.000	Felis_catus
ENSGACG00000012471	trmt6	92	57.047	ENSFALG00000013575	TRMT6	98	57.494	Ficedula_albicollis
ENSGACG00000012471	trmt6	97	55.649	ENSFDAG00000015117	TRMT6	95	55.649	Fukomys_damarensis
ENSGACG00000012471	trmt6	99	75.480	ENSFHEG00000019957	trmt6	99	75.480	Fundulus_heteroclitus
ENSGACG00000012471	trmt6	98	68.527	ENSGMOG00000011059	trmt6	100	68.527	Gadus_morhua
ENSGACG00000012471	trmt6	97	55.882	ENSGALG00000009169	TRMT6	97	55.882	Gallus_gallus
ENSGACG00000012471	trmt6	99	73.191	ENSGAFG00000008618	trmt6	99	73.191	Gambusia_affinis
ENSGACG00000012471	trmt6	97	57.595	ENSGAGG00000008464	TRMT6	98	58.315	Gopherus_agassizii
ENSGACG00000012471	trmt6	93	58.370	ENSGGOG00000008597	TRMT6	90	58.370	Gorilla_gorilla
ENSGACG00000012471	trmt6	99	73.987	ENSHBUG00000016631	trmt6	99	73.987	Haplochromis_burtoni
ENSGACG00000012471	trmt6	96	55.889	ENSHGLG00000015405	TRMT6	89	57.718	Heterocephalus_glaber_female
ENSGACG00000012471	trmt6	96	55.889	ENSHGLG00100004120	TRMT6	89	57.718	Heterocephalus_glaber_male
ENSGACG00000012471	trmt6	99	72.234	ENSHCOG00000000118	trmt6	98	72.234	Hippocampus_comes
ENSGACG00000012471	trmt6	98	68.053	ENSIPUG00000019365	trmt6	99	68.271	Ictalurus_punctatus
ENSGACG00000012471	trmt6	96	55.021	ENSSTOG00000006863	TRMT6	95	55.021	Ictidomys_tridecemlineatus
ENSGACG00000012471	trmt6	93	55.824	ENSJJAG00000007315	Trmt6	89	58.315	Jaculus_jaculus
ENSGACG00000012471	trmt6	99	76.695	ENSKMAG00000001295	trmt6	99	76.695	Kryptolebias_marmoratus
ENSGACG00000012471	trmt6	99	76.321	ENSLBEG00000025654	trmt6	99	76.321	Labrus_bergylta
ENSGACG00000012471	trmt6	97	58.996	ENSLACG00000016478	TRMT6	97	58.824	Latimeria_chalumnae
ENSGACG00000012471	trmt6	97	66.242	ENSLOCG00000016451	trmt6	97	66.883	Lepisosteus_oculatus
ENSGACG00000012471	trmt6	96	55.115	ENSLAFG00000032216	TRMT6	96	55.115	Loxodonta_africana
ENSGACG00000012471	trmt6	97	56.667	ENSMFAG00000044360	TRMT6	95	56.667	Macaca_fascicularis
ENSGACG00000012471	trmt6	97	56.667	ENSMMUG00000013728	TRMT6	95	56.667	Macaca_mulatta
ENSGACG00000012471	trmt6	97	56.667	ENSMNEG00000041831	TRMT6	95	56.667	Macaca_nemestrina
ENSGACG00000012471	trmt6	97	56.667	ENSMLEG00000040762	TRMT6	95	56.667	Mandrillus_leucophaeus
ENSGACG00000012471	trmt6	98	77.155	ENSMAMG00000012101	trmt6	99	77.155	Mastacembelus_armatus
ENSGACG00000012471	trmt6	99	73.987	ENSMZEG00005010771	trmt6	98	73.987	Maylandia_zebra
ENSGACG00000012471	trmt6	97	56.303	ENSMGAG00000007678	TRMT6	97	56.476	Meleagris_gallopavo
ENSGACG00000012471	trmt6	92	58.482	ENSMAUG00000008719	Trmt6	89	58.482	Mesocricetus_auratus
ENSGACG00000012471	trmt6	97	56.159	ENSMICG00000011626	TRMT6	90	58.278	Microcebus_murinus
ENSGACG00000012471	trmt6	96	56.303	ENSMOCG00000022320	Trmt6	89	58.559	Microtus_ochrogaster
ENSGACG00000012471	trmt6	98	73.523	ENSMMOG00000004412	trmt6	99	73.523	Mola_mola
ENSGACG00000012471	trmt6	97	55.485	ENSMODG00000003784	TRMT6	95	55.485	Monodelphis_domestica
ENSGACG00000012471	trmt6	98	73.318	ENSMALG00000018140	trmt6	98	73.318	Monopterus_albus
ENSGACG00000012471	trmt6	96	57.620	MGP_CAROLIEiJ_G0024344	Trmt6	96	56.695	Mus_caroli
ENSGACG00000012471	trmt6	96	57.620	ENSMUSG00000037376	Trmt6	95	57.620	Mus_musculus
ENSGACG00000012471	trmt6	96	57.773	MGP_PahariEiJ_G0025789	Trmt6	95	57.773	Mus_pahari
ENSGACG00000012471	trmt6	96	57.322	MGP_SPRETEiJ_G0025264	Trmt6	96	56.485	Mus_spretus
ENSGACG00000012471	trmt6	87	55.425	ENSMPUG00000006317	TRMT6	89	56.738	Mustela_putorius_furo
ENSGACG00000012471	trmt6	93	56.018	ENSMLUG00000006491	TRMT6	90	56.703	Myotis_lucifugus
ENSGACG00000012471	trmt6	96	56.092	ENSNGAG00000015251	Trmt6	95	56.092	Nannospalax_galili
ENSGACG00000012471	trmt6	98	72.991	ENSNBRG00000020261	trmt6	99	72.991	Neolamprologus_brichardi
ENSGACG00000012471	trmt6	95	57.701	ENSNLEG00000013957	TRMT6	92	57.701	Nomascus_leucogenys
ENSGACG00000012471	trmt6	86	54.157	ENSMEUG00000009179	TRMT6	99	54.157	Notamacropus_eugenii
ENSGACG00000012471	trmt6	97	55.556	ENSOPRG00000008564	TRMT6	97	56.092	Ochotona_princeps
ENSGACG00000012471	trmt6	89	57.143	ENSODEG00000005657	TRMT6	86	57.209	Octodon_degus
ENSGACG00000012471	trmt6	99	73.362	ENSONIG00000000968	trmt6	99	73.362	Oreochromis_niloticus
ENSGACG00000012471	trmt6	92	57.718	ENSOANG00000008403	-	99	57.718	Ornithorhynchus_anatinus
ENSGACG00000012471	trmt6	97	56.875	ENSOCUG00000014669	TRMT6	96	56.875	Oryctolagus_cuniculus
ENSGACG00000012471	trmt6	99	72.611	ENSORLG00000009862	trmt6	99	72.611	Oryzias_latipes
ENSGACG00000012471	trmt6	99	72.399	ENSORLG00020001466	trmt6	99	72.399	Oryzias_latipes_hni
ENSGACG00000012471	trmt6	99	72.187	ENSORLG00015015552	trmt6	99	72.187	Oryzias_latipes_hsok
ENSGACG00000012471	trmt6	97	71.179	ENSOMEG00000019874	trmt6	99	71.490	Oryzias_melastigma
ENSGACG00000012471	trmt6	93	58.186	ENSOGAG00000012950	TRMT6	90	58.186	Otolemur_garnettii
ENSGACG00000012471	trmt6	92	57.942	ENSOARG00000017993	TRMT6	89	57.942	Ovis_aries
ENSGACG00000012471	trmt6	93	57.965	ENSPPAG00000036809	TRMT6	90	57.965	Pan_paniscus
ENSGACG00000012471	trmt6	93	57.906	ENSPPRG00000000424	TRMT6	90	57.906	Panthera_pardus
ENSGACG00000012471	trmt6	93	57.906	ENSPTIG00000010629	TRMT6	90	57.906	Panthera_tigris_altaica
ENSGACG00000012471	trmt6	93	58.758	ENSPTRG00000013231	TRMT6	90	58.758	Pan_troglodytes
ENSGACG00000012471	trmt6	97	56.667	ENSPANG00000009284	TRMT6	95	56.667	Papio_anubis
ENSGACG00000012471	trmt6	97	67.026	ENSPKIG00000003441	trmt6	96	68.233	Paramormyrops_kingsleyae
ENSGACG00000012471	trmt6	97	56.356	ENSPSIG00000017048	TRMT6	99	55.280	Pelodiscus_sinensis
ENSGACG00000012471	trmt6	94	73.611	ENSPMGG00000021074	trmt6	96	73.636	Periophthalmus_magnuspinnatus
ENSGACG00000012471	trmt6	97	56.042	ENSPEMG00000023268	Trmt6	89	58.520	Peromyscus_maniculatus_bairdii
ENSGACG00000012471	trmt6	96	55.603	ENSPCIG00000001546	TRMT6	92	55.603	Phascolarctos_cinereus
ENSGACG00000012471	trmt6	99	72.500	ENSPFOG00000003037	trmt6	99	72.500	Poecilia_formosa
ENSGACG00000012471	trmt6	99	73.461	ENSPLAG00000005143	trmt6	99	73.461	Poecilia_latipinna
ENSGACG00000012471	trmt6	99	73.885	ENSPMEG00000014875	trmt6	99	73.885	Poecilia_mexicana
ENSGACG00000012471	trmt6	98	73.094	ENSPREG00000016227	trmt6	99	73.094	Poecilia_reticulata
ENSGACG00000012471	trmt6	93	58.980	ENSPPYG00000010691	TRMT6	90	58.980	Pongo_abelii
ENSGACG00000012471	trmt6	97	55.717	ENSPCAG00000012098	TRMT6	96	55.324	Procavia_capensis
ENSGACG00000012471	trmt6	97	55.741	ENSPCOG00000020723	TRMT6	90	58.000	Propithecus_coquereli
ENSGACG00000012471	trmt6	97	50.837	ENSPVAG00000007539	TRMT6	95	51.158	Pteropus_vampyrus
ENSGACG00000012471	trmt6	95	77.419	ENSPNYG00000000918	trmt6	97	77.419	Pundamilia_nyererei
ENSGACG00000012471	trmt6	98	68.522	ENSPNAG00000019279	trmt6	97	68.831	Pygocentrus_nattereri
ENSGACG00000012471	trmt6	96	55.672	ENSRNOG00000021270	Trmt6	96	55.672	Rattus_norvegicus
ENSGACG00000012471	trmt6	97	56.875	ENSRBIG00000031132	TRMT6	95	56.875	Rhinopithecus_bieti
ENSGACG00000012471	trmt6	97	56.667	ENSRROG00000045329	TRMT6	95	56.667	Rhinopithecus_roxellana
ENSGACG00000012471	trmt6	93	58.129	ENSSBOG00000033602	-	96	54.906	Saimiri_boliviensis_boliviensis
ENSGACG00000012471	trmt6	75	55.464	ENSSBOG00000019803	-	94	51.768	Saimiri_boliviensis_boliviensis
ENSGACG00000012471	trmt6	99	54.004	ENSSHAG00000010754	TRMT6	96	53.814	Sarcophilus_harrisii
ENSGACG00000012471	trmt6	98	68.815	ENSSFOG00015008429	trmt6	99	68.815	Scleropages_formosus
ENSGACG00000012471	trmt6	99	76.972	ENSSMAG00000005352	trmt6	99	77.516	Scophthalmus_maximus
ENSGACG00000012471	trmt6	99	79.104	ENSSDUG00000008294	trmt6	99	79.104	Seriola_dumerili
ENSGACG00000012471	trmt6	99	78.678	ENSSLDG00000002180	trmt6	99	78.846	Seriola_lalandi_dorsalis
ENSGACG00000012471	trmt6	97	52.621	ENSSARG00000005487	TRMT6	95	52.621	Sorex_araneus
ENSGACG00000012471	trmt6	99	77.660	ENSSPAG00000011628	trmt6	99	77.660	Stegastes_partitus
ENSGACG00000012471	trmt6	92	57.718	ENSSSCG00000007046	TRMT6	64	57.556	Sus_scrofa
ENSGACG00000012471	trmt6	97	55.882	ENSTGUG00000002195	TRMT6	97	57.325	Taeniopygia_guttata
ENSGACG00000012471	trmt6	98	71.076	ENSTRUG00000007153	trmt6	99	71.076	Takifugu_rubripes
ENSGACG00000012471	trmt6	99	73.166	ENSTNIG00000010726	TRMT6	99	73.319	Tetraodon_nigroviridis
ENSGACG00000012471	trmt6	56	68.033	ENSTBEG00000016317	TRMT6	52	68.033	Tupaia_belangeri
ENSGACG00000012471	trmt6	93	57.684	ENSTTRG00000012889	TRMT6	90	57.684	Tursiops_truncatus
ENSGACG00000012471	trmt6	93	57.238	ENSUAMG00000008674	TRMT6	89	57.238	Ursus_americanus
ENSGACG00000012471	trmt6	93	57.238	ENSUMAG00000004999	TRMT6	90	57.238	Ursus_maritimus
ENSGACG00000012471	trmt6	97	55.280	ENSVPAG00000002371	TRMT6	95	55.280	Vicugna_pacos
ENSGACG00000012471	trmt6	93	57.016	ENSVVUG00000023370	TRMT6	90	57.175	Vulpes_vulpes
ENSGACG00000012471	trmt6	99	55.992	ENSXETG00000004501	trmt6	99	56.198	Xenopus_tropicalis
ENSGACG00000012471	trmt6	96	70.909	ENSXCOG00000007761	trmt6	98	70.909	Xiphophorus_couchianus
ENSGACG00000012471	trmt6	99	73.885	ENSXMAG00000008592	trmt6	99	73.885	Xiphophorus_maculatus