EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000012495 (Gene tree)
Gene ID: -
Gene Symbol: efl1
Alias: eftud1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 25787 bases
Position: chrscaffold_98:171908-197694
Accession: ZDB-GENE-130103-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016548	GTP_EFTU	PF00009.27	7.2e-62	1	1
ENSGACP00000016556	GTP_EFTU_D2	PF03144.25	3.6e-10	1	1
ENSGACP00000016548	GTP_EFTU_D2	PF03144.25	5.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016589	-	2927	-	ENSGACP00000016556	860 (aa)	-	G3PG32
ENSGACT00000016581	-	3367	-	ENSGACP00000016548	1100 (aa)	-	G3PG24

Gene Model

Click here to download ENSGACG00000012495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000012495	efl1	90	32.242	ENSGACG00000009163	eftud2	84	32.242
ENSGACG00000012495	efl1	90	39.059	ENSGACG00000012793	-	97	39.059
ENSGACG00000012495	efl1	90	40.049	ENSGACG00000015308	eef2b	97	40.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012495	efl1	99	66.460	ENSG00000140598	EFL1	96	72.521	Homo_sapiens
ENSGACG00000012495	efl1	100	80.634	ENSAPOG00000000188	efl1	100	80.986	Acanthochromis_polyacanthus
ENSGACG00000012495	efl1	99	66.461	ENSAMEG00000006031	EFL1	99	66.549	Ailuropoda_melanoleuca
ENSGACG00000012495	efl1	100	80.936	ENSACIG00000017802	efl1	100	80.898	Amphilophus_citrinellus
ENSGACG00000012495	efl1	100	80.639	ENSAOCG00000023933	efl1	100	80.551	Amphiprion_ocellaris
ENSGACG00000012495	efl1	100	81.145	ENSAPEG00000000262	efl1	100	81.498	Amphiprion_percula
ENSGACG00000012495	efl1	100	80.722	ENSATEG00000012373	efl1	100	80.546	Anabas_testudineus
ENSGACG00000012495	efl1	100	67.279	ENSAPLG00000011147	EFL1	99	68.113	Anas_platyrhynchos
ENSGACG00000012495	efl1	99	67.320	ENSACAG00000011040	EFL1	99	67.320	Anolis_carolinensis
ENSGACG00000012495	efl1	99	66.637	ENSANAG00000027459	EFL1	99	66.726	Aotus_nancymaae
ENSGACG00000012495	efl1	100	81.366	ENSACLG00000025780	efl1	100	81.455	Astatotilapia_calliptera
ENSGACG00000012495	efl1	100	73.403	ENSAMXG00000019529	efl1	100	73.491	Astyanax_mexicanus
ENSGACG00000012495	efl1	99	67.374	ENSBTAG00000003410	EFL1	99	67.374	Bos_taurus
ENSGACG00000012495	efl1	91	43.925	WBGene00010732	K10C3.5	84	56.780	Caenorhabditis_elegans
ENSGACG00000012495	efl1	84	90.476	ENSCJAG00000015607	-	93	90.476	Callithrix_jacchus
ENSGACG00000012495	efl1	99	65.581	ENSCAFG00000013671	EFL1	99	65.581	Canis_familiaris
ENSGACG00000012495	efl1	99	67.110	ENSCHIG00000001883	EFL1	99	67.110	Capra_hircus
ENSGACG00000012495	efl1	99	66.162	ENSTSYG00000000348	EFL1	99	66.251	Carlito_syrichta
ENSGACG00000012495	efl1	99	56.678	ENSCAPG00000017944	EFL1	99	56.678	Cavia_aperea
ENSGACG00000012495	efl1	99	65.901	ENSCPOG00000001924	EFL1	99	65.989	Cavia_porcellus
ENSGACG00000012495	efl1	99	66.726	ENSCCAG00000034450	EFL1	99	66.814	Cebus_capucinus
ENSGACG00000012495	efl1	99	66.430	ENSCATG00000031678	-	99	66.519	Cercocebus_atys
ENSGACG00000012495	efl1	99	65.559	ENSCLAG00000010155	EFL1	99	65.472	Chinchilla_lanigera
ENSGACG00000012495	efl1	99	66.489	ENSCSAG00000015165	EFL1	99	66.578	Chlorocebus_sabaeus
ENSGACG00000012495	efl1	74	66.048	ENSCHOG00000014029	EFL1	78	66.048	Choloepus_hoffmanni
ENSGACG00000012495	efl1	99	66.959	ENSCPBG00000017638	EFL1	99	67.047	Chrysemys_picta_bellii
ENSGACG00000012495	efl1	99	57.845	ENSCSAVG00000001787	-	98	59.155	Ciona_savignyi
ENSGACG00000012495	efl1	99	66.372	ENSCANG00000038093	EFL1	99	66.460	Colobus_angolensis_palliatus
ENSGACG00000012495	efl1	99	63.097	ENSCGRG00001010826	Efl1	99	63.186	Cricetulus_griseus_chok1gshd
ENSGACG00000012495	efl1	99	66.106	ENSCGRG00000003273	Efl1	99	65.929	Cricetulus_griseus_crigri
ENSGACG00000012495	efl1	100	76.119	ENSCSEG00000005856	efl1	99	76.512	Cynoglossus_semilaevis
ENSGACG00000012495	efl1	100	74.711	ENSCVAG00000011863	efl1	95	74.570	Cyprinodon_variegatus
ENSGACG00000012495	efl1	100	73.801	ENSDARG00000079672	efl1	98	73.582	Danio_rerio
ENSGACG00000012495	efl1	99	66.431	ENSDNOG00000006097	EFL1	99	66.519	Dasypus_novemcinctus
ENSGACG00000012495	efl1	99	65.606	ENSDORG00000000719	Efl1	99	65.694	Dipodomys_ordii
ENSGACG00000012495	efl1	99	46.558	FBgn0053158	CG33158	99	46.920	Drosophila_melanogaster
ENSGACG00000012495	efl1	100	58.161	ENSETEG00000004309	EFL1	99	60.365	Echinops_telfairi
ENSGACG00000012495	efl1	84	67.619	ENSEBUG00000010738	efl1	99	67.619	Eptatretus_burgeri
ENSGACG00000012495	efl1	99	67.260	ENSEASG00005007108	EFL1	99	67.260	Equus_asinus_asinus
ENSGACG00000012495	efl1	100	65.212	ENSECAG00000016354	EFL1	99	66.791	Equus_caballus
ENSGACG00000012495	efl1	69	70.317	ENSEEUG00000006326	EFL1	79	70.317	Erinaceus_europaeus
ENSGACG00000012495	efl1	100	70.242	ENSELUG00000002520	efl1	99	76.610	Esox_lucius
ENSGACG00000012495	efl1	99	66.490	ENSFCAG00000007741	EFL1	99	66.490	Felis_catus
ENSGACG00000012495	efl1	99	67.683	ENSFALG00000011103	EFL1	99	67.596	Ficedula_albicollis
ENSGACG00000012495	efl1	99	65.961	ENSFDAG00000009023	EFL1	93	72.414	Fukomys_damarensis
ENSGACG00000012495	efl1	100	75.957	ENSFHEG00000017795	efl1	100	75.936	Fundulus_heteroclitus
ENSGACG00000012495	efl1	99	75.455	ENSGMOG00000005041	efl1	100	75.364	Gadus_morhua
ENSGACG00000012495	efl1	99	67.568	ENSGALG00000006225	EFL1	99	67.568	Gallus_gallus
ENSGACG00000012495	efl1	99	67.810	ENSGAGG00000022841	EFL1	99	67.810	Gopherus_agassizii
ENSGACG00000012495	efl1	100	62.486	ENSGGOG00000005017	EFL1	100	62.103	Gorilla_gorilla
ENSGACG00000012495	efl1	100	81.649	ENSHBUG00000022667	efl1	100	81.649	Haplochromis_burtoni
ENSGACG00000012495	efl1	99	63.209	ENSHGLG00000011798	EFL1	99	63.339	Heterocephalus_glaber_female
ENSGACG00000012495	efl1	99	65.603	ENSHGLG00100010319	EFTUD1	94	79.487	Heterocephalus_glaber_male
ENSGACG00000012495	efl1	100	77.460	ENSHCOG00000007325	efl1	100	77.100	Hippocampus_comes
ENSGACG00000012495	efl1	100	71.631	ENSIPUG00000023360	EFTUD1	100	71.720	Ictalurus_punctatus
ENSGACG00000012495	efl1	100	64.318	ENSSTOG00000022945	EFL1	99	63.717	Ictidomys_tridecemlineatus
ENSGACG00000012495	efl1	99	66.283	ENSJJAG00000018598	Efl1	99	66.372	Jaculus_jaculus
ENSGACG00000012495	efl1	100	79.982	ENSLBEG00000015269	efl1	100	79.894	Labrus_bergylta
ENSGACG00000012495	efl1	100	68.651	ENSLACG00000016121	EFL1	100	68.564	Latimeria_chalumnae
ENSGACG00000012495	efl1	100	73.374	ENSLOCG00000012862	efl1	99	73.222	Lepisosteus_oculatus
ENSGACG00000012495	efl1	99	65.722	ENSLAFG00000012504	EFL1	99	65.810	Loxodonta_africana
ENSGACG00000012495	efl1	99	66.578	ENSMFAG00000032657	-	99	66.667	Macaca_fascicularis
ENSGACG00000012495	efl1	100	64.914	ENSMMUG00000023353	EFL1	99	64.716	Macaca_mulatta
ENSGACG00000012495	efl1	99	66.489	ENSMNEG00000041671	-	99	66.578	Macaca_nemestrina
ENSGACG00000012495	efl1	99	66.430	ENSMLEG00000033735	EFL1	99	66.519	Mandrillus_leucophaeus
ENSGACG00000012495	efl1	100	80.477	ENSMAMG00000011336	efl1	100	80.551	Mastacembelus_armatus
ENSGACG00000012495	efl1	100	81.616	ENSMZEG00005003012	efl1	100	81.705	Maylandia_zebra
ENSGACG00000012495	efl1	99	67.870	ENSMGAG00000007991	EFL1	99	67.870	Meleagris_gallopavo
ENSGACG00000012495	efl1	99	66.372	ENSMAUG00000010709	Efl1	99	66.195	Mesocricetus_auratus
ENSGACG00000012495	efl1	99	66.549	ENSMICG00000027853	EFL1	95	72.519	Microcebus_murinus
ENSGACG00000012495	efl1	99	66.578	ENSMOCG00000007470	Efl1	99	66.667	Microtus_ochrogaster
ENSGACG00000012495	efl1	100	75.372	ENSMMOG00000015370	efl1	100	72.896	Mola_mola
ENSGACG00000012495	efl1	99	66.078	ENSMODG00000019386	EFL1	99	66.166	Monodelphis_domestica
ENSGACG00000012495	efl1	100	80.018	ENSMALG00000018810	efl1	100	79.754	Monopterus_albus
ENSGACG00000012495	efl1	99	66.343	MGP_CAROLIEiJ_G0029936	Efl1	98	74.370	Mus_caroli
ENSGACG00000012495	efl1	99	65.415	ENSMUSG00000038563	Efl1	98	73.799	Mus_musculus
ENSGACG00000012495	efl1	99	65.819	MGP_PahariEiJ_G0013157	Efl1	98	73.799	Mus_pahari
ENSGACG00000012495	efl1	99	73.469	MGP_SPRETEiJ_G0031038	Efl1	99	73.469	Mus_spretus
ENSGACG00000012495	efl1	99	65.429	ENSMPUG00000015494	EFL1	99	65.782	Mustela_putorius_furo
ENSGACG00000012495	efl1	99	66.726	ENSNGAG00000017740	Efl1	99	66.814	Nannospalax_galili
ENSGACG00000012495	efl1	100	65.257	ENSNLEG00000010679	EFL1	100	65.810	Nomascus_leucogenys
ENSGACG00000012495	efl1	63	79.592	ENSMEUG00000012049	-	69	79.592	Notamacropus_eugenii
ENSGACG00000012495	efl1	58	87.097	ENSOPRG00000012488	-	57	87.097	Ochotona_princeps
ENSGACG00000012495	efl1	99	64.846	ENSODEG00000016193	EFL1	99	64.943	Octodon_degus
ENSGACG00000012495	efl1	100	81.112	ENSONIG00000003394	efl1	100	81.377	Oreochromis_niloticus
ENSGACG00000012495	efl1	99	66.163	ENSOCUG00000012163	EFL1	99	66.252	Oryctolagus_cuniculus
ENSGACG00000012495	efl1	81	73.684	ENSORLG00000020390	efl1	100	73.759	Oryzias_latipes
ENSGACG00000012495	efl1	100	75.579	ENSORLG00015012031	efl1	100	75.312	Oryzias_latipes_hsok
ENSGACG00000012495	efl1	100	77.143	ENSOMEG00000022784	efl1	100	76.565	Oryzias_melastigma
ENSGACG00000012495	efl1	99	66.960	ENSOARG00000014452	EFL1	99	66.960	Ovis_aries
ENSGACG00000012495	efl1	99	61.804	ENSPPAG00000039672	EFL1	99	61.892	Pan_paniscus
ENSGACG00000012495	efl1	99	66.844	ENSPPRG00000002193	EFL1	99	66.726	Panthera_pardus
ENSGACG00000012495	efl1	99	66.755	ENSPTIG00000007053	EFL1	99	66.637	Panthera_tigris_altaica
ENSGACG00000012495	efl1	99	66.401	ENSPTRG00000007374	EFL1	99	66.490	Pan_troglodytes
ENSGACG00000012495	efl1	99	66.489	ENSPANG00000015635	-	98	66.578	Papio_anubis
ENSGACG00000012495	efl1	99	72.272	ENSPKIG00000018456	efl1	99	72.247	Paramormyrops_kingsleyae
ENSGACG00000012495	efl1	99	67.193	ENSPSIG00000007790	EFL1	99	67.193	Pelodiscus_sinensis
ENSGACG00000012495	efl1	100	59.710	ENSPMAG00000002026	efl1	100	61.323	Petromyzon_marinus
ENSGACG00000012495	efl1	99	67.050	ENSPCIG00000004372	EFL1	99	67.050	Phascolarctos_cinereus
ENSGACG00000012495	efl1	100	76.444	ENSPFOG00000018687	efl1	100	76.800	Poecilia_formosa
ENSGACG00000012495	efl1	100	76.444	ENSPLAG00000001988	efl1	100	76.800	Poecilia_latipinna
ENSGACG00000012495	efl1	100	76.581	ENSPMEG00000000402	efl1	100	76.937	Poecilia_mexicana
ENSGACG00000012495	efl1	100	76.533	ENSPREG00000022085	efl1	100	76.889	Poecilia_reticulata
ENSGACG00000012495	efl1	99	66.844	ENSPPYG00000006724	EFL1	99	66.933	Pongo_abelii
ENSGACG00000012495	efl1	99	66.139	ENSPVAG00000003189	EFL1	99	65.677	Pteropus_vampyrus
ENSGACG00000012495	efl1	100	72.679	ENSPNYG00000019406	efl1	100	72.856	Pundamilia_nyererei
ENSGACG00000012495	efl1	100	73.726	ENSPNAG00000012104	efl1	100	73.545	Pygocentrus_nattereri
ENSGACG00000012495	efl1	99	66.461	ENSRNOG00000032723	Efl1	99	66.461	Rattus_norvegicus
ENSGACG00000012495	efl1	99	66.460	ENSRBIG00000040576	EFL1	99	66.549	Rhinopithecus_bieti
ENSGACG00000012495	efl1	99	64.386	ENSRROG00000031475	EFL1	99	64.474	Rhinopithecus_roxellana
ENSGACG00000012495	efl1	99	40.218	YNL163C	RIA1	99	40.218	Saccharomyces_cerevisiae
ENSGACG00000012495	efl1	99	66.637	ENSSBOG00000018280	EFL1	99	66.726	Saimiri_boliviensis_boliviensis
ENSGACG00000012495	efl1	99	63.172	ENSSHAG00000018863	EFL1	99	63.260	Sarcophilus_harrisii
ENSGACG00000012495	efl1	100	73.958	ENSSFOG00015016244	efl1	100	73.698	Scleropages_formosus
ENSGACG00000012495	efl1	100	80.674	ENSSMAG00000016928	efl1	100	80.319	Scophthalmus_maximus
ENSGACG00000012495	efl1	100	82.011	ENSSDUG00000013271	efl1	100	82.011	Seriola_dumerili
ENSGACG00000012495	efl1	100	82.436	ENSSLDG00000014655	efl1	100	82.171	Seriola_lalandi_dorsalis
ENSGACG00000012495	efl1	99	67.776	ENSSPUG00000000941	EFL1	99	67.776	Sphenodon_punctatus
ENSGACG00000012495	efl1	100	81.882	ENSSPAG00000011885	efl1	100	81.706	Stegastes_partitus
ENSGACG00000012495	efl1	99	66.519	ENSSSCG00000001792	EFL1	99	66.607	Sus_scrofa
ENSGACG00000012495	efl1	99	68.486	ENSTGUG00000007850	EFL1	99	68.398	Taeniopygia_guttata
ENSGACG00000012495	efl1	100	75.114	ENSTNIG00000003399	efl1	100	70.557	Tetraodon_nigroviridis
ENSGACG00000012495	efl1	76	68.056	ENSTBEG00000011804	EFL1	78	71.429	Tupaia_belangeri
ENSGACG00000012495	efl1	100	64.726	ENSTTRG00000011243	EFL1	99	65.724	Tursiops_truncatus
ENSGACG00000012495	efl1	99	66.313	ENSUAMG00000022106	EFL1	99	66.401	Ursus_americanus
ENSGACG00000012495	efl1	99	66.578	ENSUMAG00000010303	EFL1	99	66.667	Ursus_maritimus
ENSGACG00000012495	efl1	88	74.477	ENSVPAG00000005735	EFL1	89	74.477	Vicugna_pacos
ENSGACG00000012495	efl1	99	65.669	ENSVVUG00000004967	EFL1	99	65.669	Vulpes_vulpes
ENSGACG00000012495	efl1	100	68.564	ENSXETG00000015701	EFL1	100	68.297	Xenopus_tropicalis
ENSGACG00000012495	efl1	100	76.356	ENSXMAG00000023705	efl1	100	76.356	Xiphophorus_maculatus