EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000012500 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3043 bases
Position: chrgroupXIX:15928031-15931073
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016561	MMR_HSR1	PF01926.23	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016594	-	886	-	ENSGACP00000016561	180 (aa)	-	G3PG37

Gene Model

Click here to download ENSGACG00000012500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000012500	-	95	41.040	ENSGACG00000018033	arl3l2	93	41.040
ENSGACG00000012500	-	98	44.382	ENSGACG00000003070	arl3	93	44.382
ENSGACG00000012500	-	98	58.757	ENSGACG00000019098	arl1	98	58.757
ENSGACG00000012500	-	89	30.286	ENSGACG00000008616	sar1ab	87	30.286
ENSGACG00000012500	-	96	42.286	ENSGACG00000016756	-	96	42.286
ENSGACG00000012500	-	98	80.791	ENSGACG00000000746	arf3b	98	80.791
ENSGACG00000012500	-	87	42.593	ENSGACG00000013840	arl14	90	42.593
ENSGACG00000012500	-	87	44.444	ENSGACG00000000500	-	84	44.444
ENSGACG00000012500	-	96	48.571	ENSGACG00000019812	arl2	93	48.571
ENSGACG00000012500	-	100	40.884	ENSGACG00000015399	arl11	100	40.884
ENSGACG00000012500	-	88	43.452	ENSGACG00000003710	arl4d	84	43.452
ENSGACG00000012500	-	98	35.450	ENSGACG00000011497	arfrp1	93	35.450
ENSGACG00000012500	-	98	78.977	ENSGACG00000014195	-	95	78.977
ENSGACG00000012500	-	98	81.921	ENSGACG00000004343	arf2b	98	81.921
ENSGACG00000012500	-	100	44.444	ENSGACG00000001204	arl5a	98	44.693
ENSGACG00000012500	-	91	40.120	ENSGACG00000006779	-	90	40.120
ENSGACG00000012500	-	92	31.928	ENSGACG00000012267	arl8ba	89	31.928
ENSGACG00000012500	-	95	45.198	ENSGACG00000008143	arl4cb	92	45.198
ENSGACG00000012500	-	73	33.333	ENSGACG00000000273	arl8a	71	33.333
ENSGACG00000012500	-	91	45.294	ENSGACG00000012810	arl4aa	85	45.294
ENSGACG00000012500	-	92	33.133	ENSGACG00000011972	arl8bb	89	34.459
ENSGACG00000012500	-	99	81.006	ENSGACG00000017437	-	99	81.006
ENSGACG00000012500	-	97	45.402	ENSGACG00000004052	arl8	97	45.402
ENSGACG00000012500	-	94	38.764	ENSGACG00000015382	ARL6	96	38.764
ENSGACG00000012500	-	89	50.303	ENSGACG00000010096	-	95	50.303
ENSGACG00000012500	-	98	67.416	ENSGACG00000003831	-	99	67.416
ENSGACG00000012500	-	98	41.243	ENSGACG00000009321	arl5c	98	41.243
ENSGACG00000012500	-	98	79.661	ENSGACG00000009120	-	98	79.661
ENSGACG00000012500	-	99	43.784	ENSGACG00000000497	-	93	43.784
ENSGACG00000012500	-	99	86.034	ENSGACG00000000686	arf5	99	86.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012500	-	99	84.916	ENSG00000004059	ARF5	99	87.417	Homo_sapiens
ENSGACG00000012500	-	100	90.556	ENSAPOG00000000667	-	100	90.556	Acanthochromis_polyacanthus
ENSGACG00000012500	-	99	84.916	ENSAMEG00000004635	ARF5	99	84.916	Ailuropoda_melanoleuca
ENSGACG00000012500	-	99	87.151	ENSACIG00000005843	arf5	99	87.151	Amphilophus_citrinellus
ENSGACG00000012500	-	98	68.362	ENSACIG00000014610	zgc:110286	98	68.362	Amphilophus_citrinellus
ENSGACG00000012500	-	100	90.556	ENSACIG00000000467	-	100	90.556	Amphilophus_citrinellus
ENSGACG00000012500	-	100	90.000	ENSAOCG00000008113	-	100	90.000	Amphiprion_ocellaris
ENSGACG00000012500	-	100	85.000	ENSAOCG00000023329	arf5	100	85.000	Amphiprion_ocellaris
ENSGACG00000012500	-	100	85.000	ENSAPEG00000024614	arf5	100	85.000	Amphiprion_percula
ENSGACG00000012500	-	100	90.000	ENSAPEG00000003087	-	100	90.000	Amphiprion_percula
ENSGACG00000012500	-	99	87.151	ENSATEG00000003053	ARF5	99	87.151	Anabas_testudineus
ENSGACG00000012500	-	100	91.667	ENSATEG00000001302	-	100	91.667	Anabas_testudineus
ENSGACG00000012500	-	99	84.916	ENSANAG00000026446	ARF5	99	84.916	Aotus_nancymaae
ENSGACG00000012500	-	99	87.709	ENSACLG00000005705	arf5	99	87.709	Astatotilapia_calliptera
ENSGACG00000012500	-	100	90.556	ENSACLG00000025604	-	100	90.556	Astatotilapia_calliptera
ENSGACG00000012500	-	99	85.475	ENSAMXG00000031467	arf4a	99	85.475	Astyanax_mexicanus
ENSGACG00000012500	-	99	86.034	ENSAMXG00000031774	ARF5	99	86.034	Astyanax_mexicanus
ENSGACG00000012500	-	99	87.709	ENSAMXG00000004249	-	99	87.709	Astyanax_mexicanus
ENSGACG00000012500	-	99	88.268	ENSAMXG00000038224	-	99	88.268	Astyanax_mexicanus
ENSGACG00000012500	-	99	84.916	ENSBTAG00000009366	ARF5	99	84.916	Bos_taurus
ENSGACG00000012500	-	99	84.916	WBGene00000183	arf-3	99	84.916	Caenorhabditis_elegans
ENSGACG00000012500	-	99	84.916	ENSCJAG00000017604	ARF5	99	84.916	Callithrix_jacchus
ENSGACG00000012500	-	99	71.362	ENSCAFG00020021629	ARF5	99	71.362	Canis_lupus_dingo
ENSGACG00000012500	-	99	84.916	ENSCHIG00000018906	ARF5	99	84.916	Capra_hircus
ENSGACG00000012500	-	99	83.333	ENSCPOG00000006239	ARF5	99	83.333	Cavia_porcellus
ENSGACG00000012500	-	99	84.916	ENSCCAG00000027943	-	99	84.916	Cebus_capucinus
ENSGACG00000012500	-	99	84.916	ENSCATG00000010217	ARF5	99	84.916	Cercocebus_atys
ENSGACG00000012500	-	99	84.916	ENSCLAG00000007930	ARF5	99	84.916	Chinchilla_lanigera
ENSGACG00000012500	-	99	84.916	ENSCSAG00000010208	ARF5	99	84.916	Chlorocebus_sabaeus
ENSGACG00000012500	-	100	75.000	ENSCING00000004846	-	100	75.000	Ciona_intestinalis
ENSGACG00000012500	-	100	73.626	ENSCSAVG00000001959	-	100	73.626	Ciona_savignyi
ENSGACG00000012500	-	89	84.375	ENSCANG00000037234	ARF5	98	84.375	Colobus_angolensis_palliatus
ENSGACG00000012500	-	99	84.916	ENSCGRG00001024919	Arf5	99	84.916	Cricetulus_griseus_chok1gshd
ENSGACG00000012500	-	99	82.682	ENSCSEG00000006004	arf5	99	82.682	Cynoglossus_semilaevis
ENSGACG00000012500	-	99	87.709	ENSCVAG00000007314	-	99	87.709	Cyprinodon_variegatus
ENSGACG00000012500	-	99	87.709	ENSCVAG00000009124	ARF5	99	87.709	Cyprinodon_variegatus
ENSGACG00000012500	-	100	89.444	ENSCVAG00000011381	-	100	89.444	Cyprinodon_variegatus
ENSGACG00000012500	-	99	68.889	ENSDARG00000074210	ARF5	88	68.889	Danio_rerio
ENSGACG00000012500	-	99	88.268	ENSDARG00000113899	zgc:77650	99	88.268	Danio_rerio
ENSGACG00000012500	-	99	88.268	ENSDARG00000070472	arf5	99	88.268	Danio_rerio
ENSGACG00000012500	-	99	85.475	ENSDARG00000045989	arf4a	99	85.475	Danio_rerio
ENSGACG00000012500	-	99	84.916	ENSDORG00000000325	Arf5	99	84.916	Dipodomys_ordii
ENSGACG00000012500	-	99	83.799	FBgn0013749	Arf102F	99	83.799	Drosophila_melanogaster
ENSGACG00000012500	-	97	81.609	ENSETEG00000009275	ARF5	99	81.609	Echinops_telfairi
ENSGACG00000012500	-	99	82.123	ENSEBUG00000014420	-	99	82.123	Eptatretus_burgeri
ENSGACG00000012500	-	99	70.391	ENSEBUG00000004484	-	99	70.391	Eptatretus_burgeri
ENSGACG00000012500	-	99	72.626	ENSELUG00000014428	arf4	99	72.626	Esox_lucius
ENSGACG00000012500	-	99	84.916	ENSFCAG00000005482	ARF5	99	84.916	Felis_catus
ENSGACG00000012500	-	99	87.151	ENSFHEG00000023119	arf5	99	87.151	Fundulus_heteroclitus
ENSGACG00000012500	-	99	85.475	ENSGMOG00000008747	arf5	99	85.475	Gadus_morhua
ENSGACG00000012500	-	99	86.034	ENSGMOG00000019109	-	99	86.034	Gadus_morhua
ENSGACG00000012500	-	99	87.709	ENSGAFG00000018703	arf5	99	87.709	Gambusia_affinis
ENSGACG00000012500	-	100	87.778	ENSGAFG00000005163	-	100	87.778	Gambusia_affinis
ENSGACG00000012500	-	99	86.034	ENSGAGG00000000231	ARF5	99	86.034	Gopherus_agassizii
ENSGACG00000012500	-	99	84.916	ENSGGOG00000016749	ARF5	99	84.916	Gorilla_gorilla
ENSGACG00000012500	-	100	90.556	ENSHBUG00000011041	-	100	90.556	Haplochromis_burtoni
ENSGACG00000012500	-	99	87.709	ENSHBUG00000008546	arf5	99	87.709	Haplochromis_burtoni
ENSGACG00000012500	-	99	84.916	ENSHGLG00000007494	ARF5	99	84.916	Heterocephalus_glaber_female
ENSGACG00000012500	-	100	83.333	ENSHGLG00100006040	ARF5	60	83.333	Heterocephalus_glaber_male
ENSGACG00000012500	-	99	87.151	ENSHCOG00000015577	-	100	87.151	Hippocampus_comes
ENSGACG00000012500	-	99	68.156	ENSIPUG00000006913	-	70	68.156	Ictalurus_punctatus
ENSGACG00000012500	-	99	86.034	ENSIPUG00000007016	arf4	99	86.034	Ictalurus_punctatus
ENSGACG00000012500	-	99	87.151	ENSIPUG00000004159	Arf5	99	87.151	Ictalurus_punctatus
ENSGACG00000012500	-	99	87.151	ENSIPUG00000004215	arf5	99	87.151	Ictalurus_punctatus
ENSGACG00000012500	-	99	84.916	ENSSTOG00000002104	ARF5	99	84.916	Ictidomys_tridecemlineatus
ENSGACG00000012500	-	99	84.916	ENSJJAG00000005105	Arf5	99	84.916	Jaculus_jaculus
ENSGACG00000012500	-	100	90.000	ENSKMAG00000012816	-	100	90.000	Kryptolebias_marmoratus
ENSGACG00000012500	-	99	86.034	ENSLBEG00000026532	arf5	99	86.034	Labrus_bergylta
ENSGACG00000012500	-	99	83.708	ENSLBEG00000012002	-	98	83.708	Labrus_bergylta
ENSGACG00000012500	-	99	84.916	ENSLAFG00000011469	ARF5	99	84.916	Loxodonta_africana
ENSGACG00000012500	-	99	84.916	ENSMFAG00000019772	ARF5	99	84.916	Macaca_fascicularis
ENSGACG00000012500	-	99	84.916	ENSMMUG00000046381	ARF5	99	84.916	Macaca_mulatta
ENSGACG00000012500	-	99	84.916	ENSMNEG00000040893	ARF5	99	84.916	Macaca_nemestrina
ENSGACG00000012500	-	99	86.592	ENSMAMG00000021160	arf5	99	86.592	Mastacembelus_armatus
ENSGACG00000012500	-	100	91.111	ENSMAMG00000008223	-	100	91.111	Mastacembelus_armatus
ENSGACG00000012500	-	99	87.709	ENSMZEG00005015033	arf5	66	87.709	Maylandia_zebra
ENSGACG00000012500	-	88	90.506	ENSMZEG00005019741	-	94	90.506	Maylandia_zebra
ENSGACG00000012500	-	99	84.916	ENSMAUG00000014825	Arf5	99	84.916	Mesocricetus_auratus
ENSGACG00000012500	-	99	84.916	ENSMICG00000000091	ARF5	99	84.916	Microcebus_murinus
ENSGACG00000012500	-	99	84.916	ENSMOCG00000022861	Arf5	99	84.916	Microtus_ochrogaster
ENSGACG00000012500	-	99	84.358	ENSMODG00000015229	ARF5	99	84.358	Monodelphis_domestica
ENSGACG00000012500	-	99	67.598	ENSMALG00000022638	zgc:110286	100	67.598	Monopterus_albus
ENSGACG00000012500	-	100	91.111	ENSMALG00000006020	-	100	91.111	Monopterus_albus
ENSGACG00000012500	-	99	87.151	ENSMALG00000010117	-	99	87.151	Monopterus_albus
ENSGACG00000012500	-	99	84.916	MGP_CAROLIEiJ_G0028156	Arf5	99	84.916	Mus_caroli
ENSGACG00000012500	-	99	84.916	ENSMUSG00000020440	Arf5	99	84.916	Mus_musculus
ENSGACG00000012500	-	99	84.916	MGP_PahariEiJ_G0021914	Arf5	99	84.916	Mus_pahari
ENSGACG00000012500	-	99	84.916	MGP_SPRETEiJ_G0029156	Arf5	99	84.916	Mus_spretus
ENSGACG00000012500	-	99	84.916	ENSMPUG00000006675	ARF5	99	84.916	Mustela_putorius_furo
ENSGACG00000012500	-	99	84.916	ENSMLUG00000017122	ARF5	99	84.916	Myotis_lucifugus
ENSGACG00000012500	-	99	84.916	ENSNGAG00000011743	Arf5	99	84.916	Nannospalax_galili
ENSGACG00000012500	-	99	87.709	ENSNBRG00000018854	arf5	99	87.709	Neolamprologus_brichardi
ENSGACG00000012500	-	99	84.916	ENSODEG00000011800	ARF5	99	84.916	Octodon_degus
ENSGACG00000012500	-	99	87.709	ENSONIG00000007594	arf5	99	87.709	Oreochromis_niloticus
ENSGACG00000012500	-	100	90.556	ENSONIG00000014890	-	100	90.556	Oreochromis_niloticus
ENSGACG00000012500	-	99	84.916	ENSOCUG00000024365	ARF5	99	84.916	Oryctolagus_cuniculus
ENSGACG00000012500	-	100	90.000	ENSORLG00020001755	-	100	90.000	Oryzias_latipes_hni
ENSGACG00000012500	-	100	90.556	ENSOMEG00000000211	-	65	90.556	Oryzias_melastigma
ENSGACG00000012500	-	99	87.151	ENSOMEG00000020821	ARF5	99	87.151	Oryzias_melastigma
ENSGACG00000012500	-	99	84.916	ENSOGAG00000013336	ARF5	99	84.916	Otolemur_garnettii
ENSGACG00000012500	-	99	84.916	ENSPPAG00000037755	ARF5	99	84.916	Pan_paniscus
ENSGACG00000012500	-	99	84.916	ENSPPRG00000004674	ARF5	99	84.916	Panthera_pardus
ENSGACG00000012500	-	99	84.916	ENSPTRG00000019651	ARF5	99	84.916	Pan_troglodytes
ENSGACG00000012500	-	99	84.916	ENSPANG00000032970	ARF5	99	84.916	Papio_anubis
ENSGACG00000012500	-	99	86.034	ENSPKIG00000025381	-	99	86.034	Paramormyrops_kingsleyae
ENSGACG00000012500	-	100	85.000	ENSPKIG00000013814	-	100	85.000	Paramormyrops_kingsleyae
ENSGACG00000012500	-	99	84.916	ENSPKIG00000025349	arf4a	99	84.916	Paramormyrops_kingsleyae
ENSGACG00000012500	-	99	84.916	ENSPMGG00000009985	-	99	84.916	Periophthalmus_magnuspinnatus
ENSGACG00000012500	-	99	84.916	ENSPEMG00000021476	Arf5	99	84.916	Peromyscus_maniculatus_bairdii
ENSGACG00000012500	-	99	77.095	ENSPMAG00000009600	arf4a	100	77.095	Petromyzon_marinus
ENSGACG00000012500	-	100	87.293	ENSPFOG00000017992	-	100	87.293	Poecilia_formosa
ENSGACG00000012500	-	99	87.709	ENSPFOG00000015817	arf5	99	87.709	Poecilia_formosa
ENSGACG00000012500	-	99	87.709	ENSPLAG00000006742	arf5	99	87.709	Poecilia_latipinna
ENSGACG00000012500	-	100	87.778	ENSPLAG00000015630	-	100	87.778	Poecilia_latipinna
ENSGACG00000012500	-	99	87.709	ENSPMEG00000009605	arf5	99	87.709	Poecilia_mexicana
ENSGACG00000012500	-	100	87.778	ENSPMEG00000004624	-	100	87.778	Poecilia_mexicana
ENSGACG00000012500	-	99	84.916	ENSPCOG00000027640	ARF5	99	84.916	Propithecus_coquereli
ENSGACG00000012500	-	99	84.916	ENSPVAG00000013940	ARF5	99	84.916	Pteropus_vampyrus
ENSGACG00000012500	-	100	90.556	ENSPNYG00000004931	-	100	90.556	Pundamilia_nyererei
ENSGACG00000012500	-	99	87.709	ENSPNYG00000001663	arf5	99	87.709	Pundamilia_nyererei
ENSGACG00000012500	-	99	84.358	ENSPNAG00000004745	arf4a	99	84.358	Pygocentrus_nattereri
ENSGACG00000012500	-	99	68.715	ENSPNAG00000004475	-	99	68.715	Pygocentrus_nattereri
ENSGACG00000012500	-	99	87.709	ENSPNAG00000024427	-	99	87.709	Pygocentrus_nattereri
ENSGACG00000012500	-	99	72.067	ENSPNAG00000005054	-	99	72.067	Pygocentrus_nattereri
ENSGACG00000012500	-	99	84.916	ENSRNOG00000007806	Arf5	99	84.916	Rattus_norvegicus
ENSGACG00000012500	-	99	84.916	ENSRBIG00000039868	ARF5	99	84.916	Rhinopithecus_bieti
ENSGACG00000012500	-	99	84.916	ENSRROG00000041157	ARF5	99	84.916	Rhinopithecus_roxellana
ENSGACG00000012500	-	99	84.916	ENSSBOG00000021669	ARF5	99	84.916	Saimiri_boliviensis_boliviensis
ENSGACG00000012500	-	99	84.358	ENSSHAG00000015053	ARF5	99	84.358	Sarcophilus_harrisii
ENSGACG00000012500	-	99	77.654	ENSSFOG00015007701	-	99	77.654	Scleropages_formosus
ENSGACG00000012500	-	99	85.475	ENSSFOG00015020707	ARF5	99	85.475	Scleropages_formosus
ENSGACG00000012500	-	99	87.151	ENSSMAG00000011361	arf5	99	87.151	Scophthalmus_maximus
ENSGACG00000012500	-	100	88.333	ENSSMAG00000004541	-	100	88.333	Scophthalmus_maximus
ENSGACG00000012500	-	99	87.151	ENSSDUG00000005105	arf5	99	87.151	Seriola_dumerili
ENSGACG00000012500	-	99	87.151	ENSSLDG00000017188	arf5	99	87.151	Seriola_lalandi_dorsalis
ENSGACG00000012500	-	100	92.222	ENSSPAG00000022680	-	100	92.222	Stegastes_partitus
ENSGACG00000012500	-	99	86.034	ENSSPAG00000014434	arf5	99	86.034	Stegastes_partitus
ENSGACG00000012500	-	99	84.916	ENSSSCG00000016593	ARF5	99	84.916	Sus_scrofa
ENSGACG00000012500	-	99	86.034	ENSTRUG00000025462	-	100	86.034	Takifugu_rubripes
ENSGACG00000012500	-	99	83.799	ENSTNIG00000017954	-	100	83.799	Tetraodon_nigroviridis
ENSGACG00000012500	-	99	86.592	ENSTNIG00000003348	arf5	100	86.592	Tetraodon_nigroviridis
ENSGACG00000012500	-	89	85.714	ENSTTRG00000006043	ARF5	99	85.714	Tursiops_truncatus
ENSGACG00000012500	-	99	84.916	ENSUAMG00000012982	ARF5	99	84.916	Ursus_americanus
ENSGACG00000012500	-	99	84.916	ENSVVUG00000007062	ARF5	99	84.916	Vulpes_vulpes
ENSGACG00000012500	-	100	87.778	ENSXCOG00000020384	-	100	87.778	Xiphophorus_couchianus
ENSGACG00000012500	-	100	87.778	ENSXMAG00000004558	-	100	87.778	Xiphophorus_maculatus
ENSGACG00000012500	-	99	87.709	ENSXMAG00000015306	arf5	99	87.709	Xiphophorus_maculatus