EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000012556 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7512 bases
Position: chrgroupXI:11812939-11820450
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016596	MMR_HSR1	PF01926.23	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016629	-	1045	-	ENSGACP00000016596	311 (aa)	-	G3PG72

Gene Model

Click here to download ENSGACG00000012556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000012556	-	86	98.876	ENSGACG00000001319	-	99	98.876
ENSGACG00000012556	-	88	95.238	ENSGACG00000012548	-	93	95.238
ENSGACG00000012556	-	86	36.667	ENSGACG00000009755	zgc:153654	59	36.667
ENSGACG00000012556	-	87	36.162	ENSGACG00000007958	si:ch211-197g15.10	63	35.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012556	-	85	53.585	ENSACIG00000004501	-	92	53.585	Amphilophus_citrinellus
ENSGACG00000012556	-	83	62.403	ENSACIG00000000741	-	95	60.300	Amphilophus_citrinellus
ENSGACG00000012556	-	86	54.682	ENSACIG00000004444	-	96	54.682	Amphilophus_citrinellus
ENSGACG00000012556	-	84	59.770	ENSACIG00000015616	-	97	56.877	Amphilophus_citrinellus
ENSGACG00000012556	-	84	56.705	ENSACIG00000004521	-	92	56.705	Amphilophus_citrinellus
ENSGACG00000012556	-	83	60.465	ENSACIG00000004426	-	88	60.465	Amphilophus_citrinellus
ENSGACG00000012556	-	84	59.770	ENSACIG00000015684	-	93	59.770	Amphilophus_citrinellus
ENSGACG00000012556	-	84	55.725	ENSACIG00000004408	-	91	55.725	Amphilophus_citrinellus
ENSGACG00000012556	-	77	42.857	ENSACIG00000015237	-	90	42.857	Amphilophus_citrinellus
ENSGACG00000012556	-	87	56.204	ENSAOCG00000002056	-	91	56.204	Amphiprion_ocellaris
ENSGACG00000012556	-	87	55.147	ENSAPEG00000021053	-	96	55.147	Amphiprion_percula
ENSGACG00000012556	-	86	54.887	ENSATEG00000002869	-	94	54.887	Anabas_testudineus
ENSGACG00000012556	-	90	47.703	ENSATEG00000002718	-	85	48.718	Anabas_testudineus
ENSGACG00000012556	-	84	52.672	ENSACLG00000027615	-	98	52.672	Astatotilapia_calliptera
ENSGACG00000012556	-	86	46.296	ENSACLG00000010292	-	95	46.296	Astatotilapia_calliptera
ENSGACG00000012556	-	82	47.287	ENSACLG00000018321	-	90	47.287	Astatotilapia_calliptera
ENSGACG00000012556	-	83	57.752	ENSACLG00000016487	-	90	56.134	Astatotilapia_calliptera
ENSGACG00000012556	-	83	50.193	ENSACLG00000002020	-	95	50.193	Astatotilapia_calliptera
ENSGACG00000012556	-	78	45.902	ENSACLG00000016390	-	94	45.902	Astatotilapia_calliptera
ENSGACG00000012556	-	80	36.508	ENSAMXG00000037563	-	89	36.508	Astyanax_mexicanus
ENSGACG00000012556	-	83	49.416	ENSCSEG00000018832	-	95	49.416	Cynoglossus_semilaevis
ENSGACG00000012556	-	81	50.198	ENSCVAG00000023166	-	96	50.000	Cyprinodon_variegatus
ENSGACG00000012556	-	56	44.068	ENSCVAG00000014640	-	81	44.068	Cyprinodon_variegatus
ENSGACG00000012556	-	79	45.669	ENSCVAG00000007214	-	96	45.669	Cyprinodon_variegatus
ENSGACG00000012556	-	88	45.324	ENSCVAG00000016719	-	96	45.126	Cyprinodon_variegatus
ENSGACG00000012556	-	85	41.199	ENSDARG00000075791	si:dkey-79f11.5	84	41.199	Danio_rerio
ENSGACG00000012556	-	56	35.429	ENSDARG00000092361	si:dkey-79f11.7	71	35.714	Danio_rerio
ENSGACG00000012556	-	80	38.281	ENSDARG00000095309	si:dkey-79f11.9	87	38.866	Danio_rerio
ENSGACG00000012556	-	67	45.933	ENSDARG00000015678	si:dkeyp-75b4.9	99	45.933	Danio_rerio
ENSGACG00000012556	-	86	40.892	ENSDARG00000107486	CR855320.3	91	40.892	Danio_rerio
ENSGACG00000012556	-	85	37.778	ENSDARG00000029720	si:dkeyp-9d4.2	90	38.519	Danio_rerio
ENSGACG00000012556	-	88	38.321	ENSDARG00000010729	CABZ01073795.1	92	38.202	Danio_rerio
ENSGACG00000012556	-	99	39.806	ENSDARG00000095673	si:dkey-79f11.8	82	41.636	Danio_rerio
ENSGACG00000012556	-	87	40.293	ENSDARG00000092634	CABZ01000634.1	92	40.293	Danio_rerio
ENSGACG00000012556	-	87	40.659	ENSDARG00000093857	si:dkey-79f11.10	85	40.659	Danio_rerio
ENSGACG00000012556	-	82	44.882	ENSFHEG00000018078	-	92	44.882	Fundulus_heteroclitus
ENSGACG00000012556	-	69	49.321	ENSFHEG00000019992	-	73	49.321	Fundulus_heteroclitus
ENSGACG00000012556	-	85	48.519	ENSFHEG00000021105	-	88	48.519	Fundulus_heteroclitus
ENSGACG00000012556	-	89	48.014	ENSFHEG00000018069	-	91	48.699	Fundulus_heteroclitus
ENSGACG00000012556	-	78	43.725	ENSGAFG00000019422	-	95	43.725	Gambusia_affinis
ENSGACG00000012556	-	87	45.588	ENSGAFG00000019423	-	60	45.588	Gambusia_affinis
ENSGACG00000012556	-	80	54.435	ENSHBUG00000010945	-	92	54.435	Haplochromis_burtoni
ENSGACG00000012556	-	83	43.023	ENSIPUG00000005624	-	95	43.023	Ictalurus_punctatus
ENSGACG00000012556	-	85	42.205	ENSIPUG00000007632	-	75	42.205	Ictalurus_punctatus
ENSGACG00000012556	-	62	33.668	ENSIPUG00000006725	-	98	33.668	Ictalurus_punctatus
ENSGACG00000012556	-	85	43.396	ENSIPUG00000006852	-	83	43.396	Ictalurus_punctatus
ENSGACG00000012556	-	81	50.198	ENSKMAG00000000369	-	93	50.198	Kryptolebias_marmoratus
ENSGACG00000012556	-	88	47.292	ENSKMAG00000000325	-	90	50.593	Kryptolebias_marmoratus
ENSGACG00000012556	-	86	50.000	ENSKMAG00000006729	-	99	50.000	Kryptolebias_marmoratus
ENSGACG00000012556	-	84	53.640	ENSMAMG00000003570	-	91	53.640	Mastacembelus_armatus
ENSGACG00000012556	-	90	44.561	ENSMAMG00000003546	-	91	45.091	Mastacembelus_armatus
ENSGACG00000012556	-	84	56.705	ENSMZEG00005008329	-	98	56.705	Maylandia_zebra
ENSGACG00000012556	-	82	47.287	ENSMZEG00005015498	-	90	47.287	Maylandia_zebra
ENSGACG00000012556	-	84	56.705	ENSMZEG00005008301	-	98	56.322	Maylandia_zebra
ENSGACG00000012556	-	85	48.106	ENSNBRG00000020744	-	91	47.584	Neolamprologus_brichardi
ENSGACG00000012556	-	89	45.329	ENSNBRG00000023290	-	89	47.584	Neolamprologus_brichardi
ENSGACG00000012556	-	85	54.682	ENSNBRG00000020806	-	91	54.682	Neolamprologus_brichardi
ENSGACG00000012556	-	84	55.172	ENSNBRG00000022075	-	91	55.253	Neolamprologus_brichardi
ENSGACG00000012556	-	79	57.959	ENSNBRG00000020781	-	98	57.959	Neolamprologus_brichardi
ENSGACG00000012556	-	84	57.854	ENSNBRG00000006386	-	98	57.854	Neolamprologus_brichardi
ENSGACG00000012556	-	87	53.676	ENSNBRG00000006414	-	92	53.309	Neolamprologus_brichardi
ENSGACG00000012556	-	82	48.450	ENSNBRG00000024253	-	87	48.450	Neolamprologus_brichardi
ENSGACG00000012556	-	79	54.251	ENSONIG00000017465	-	99	54.251	Oreochromis_niloticus
ENSGACG00000012556	-	83	57.143	ENSONIG00000015167	-	100	57.143	Oreochromis_niloticus
ENSGACG00000012556	-	58	59.116	ENSONIG00000013227	-	100	59.116	Oreochromis_niloticus
ENSGACG00000012556	-	78	50.813	ENSONIG00000016843	-	99	50.813	Oreochromis_niloticus
ENSGACG00000012556	-	88	41.727	ENSONIG00000018790	-	94	41.727	Oreochromis_niloticus
ENSGACG00000012556	-	79	55.510	ENSONIG00000012317	-	98	55.510	Oreochromis_niloticus
ENSGACG00000012556	-	83	56.371	ENSONIG00000012319	-	99	56.371	Oreochromis_niloticus
ENSGACG00000012556	-	84	55.556	ENSONIG00000015247	-	92	55.556	Oreochromis_niloticus
ENSGACG00000012556	-	82	53.906	ENSONIG00000015371	-	99	53.906	Oreochromis_niloticus
ENSGACG00000012556	-	85	45.283	ENSPMGG00000022341	-	79	45.283	Periophthalmus_magnuspinnatus
ENSGACG00000012556	-	83	47.925	ENSPMGG00000002695	-	98	47.925	Periophthalmus_magnuspinnatus
ENSGACG00000012556	-	83	52.510	ENSPMGG00000012906	-	92	53.282	Periophthalmus_magnuspinnatus
ENSGACG00000012556	-	86	44.403	ENSPMGG00000004994	-	93	44.403	Periophthalmus_magnuspinnatus
ENSGACG00000012556	-	86	49.254	ENSPFOG00000003807	-	94	49.254	Poecilia_formosa
ENSGACG00000012556	-	86	45.896	ENSPFOG00000015455	-	89	45.896	Poecilia_formosa
ENSGACG00000012556	-	86	48.881	ENSPFOG00000003841	-	93	48.529	Poecilia_formosa
ENSGACG00000012556	-	87	44.891	ENSPFOG00000015493	-	94	44.891	Poecilia_formosa
ENSGACG00000012556	-	99	43.226	ENSPFOG00000015382	-	94	47.232	Poecilia_formosa
ENSGACG00000012556	-	87	47.037	ENSPLAG00000018274	-	96	47.037	Poecilia_latipinna
ENSGACG00000012556	-	83	45.946	ENSPMEG00000018626	-	91	45.946	Poecilia_mexicana
ENSGACG00000012556	-	99	43.366	ENSPMEG00000018635	-	94	47.407	Poecilia_mexicana
ENSGACG00000012556	-	86	46.919	ENSPREG00000005137	-	95	48.341	Poecilia_reticulata
ENSGACG00000012556	-	88	53.650	ENSPNYG00000024019	-	91	53.480	Pundamilia_nyererei
ENSGACG00000012556	-	82	47.287	ENSPNYG00000001584	-	90	47.287	Pundamilia_nyererei
ENSGACG00000012556	-	87	53.676	ENSPNYG00000005478	-	94	53.676	Pundamilia_nyererei
ENSGACG00000012556	-	86	44.195	ENSPNAG00000009266	-	97	44.195	Pygocentrus_nattereri
ENSGACG00000012556	-	86	36.525	ENSPNAG00000006327	-	68	36.525	Pygocentrus_nattereri
ENSGACG00000012556	-	86	52.060	ENSSDUG00000002417	-	98	52.060	Seriola_dumerili
ENSGACG00000012556	-	85	51.880	ENSSDUG00000002359	-	98	51.880	Seriola_dumerili
ENSGACG00000012556	-	87	52.015	ENSSLDG00000008952	-	96	52.015	Seriola_lalandi_dorsalis
ENSGACG00000012556	-	86	52.809	ENSSLDG00000016397	-	99	52.809	Seriola_lalandi_dorsalis
ENSGACG00000012556	-	83	57.854	ENSSPAG00000012915	-	98	57.854	Stegastes_partitus
ENSGACG00000012556	-	86	58.736	ENSSPAG00000012856	-	95	58.736	Stegastes_partitus
ENSGACG00000012556	-	54	50.289	ENSXCOG00000003913	-	87	50.289	Xiphophorus_couchianus
ENSGACG00000012556	-	62	52.020	ENSXCOG00000008517	-	61	52.020	Xiphophorus_couchianus
ENSGACG00000012556	-	72	44.737	ENSXCOG00000019639	-	86	44.737	Xiphophorus_couchianus
ENSGACG00000012556	-	86	49.632	ENSXMAG00000029117	-	96	49.632	Xiphophorus_maculatus
ENSGACG00000012556	-	85	46.241	ENSXMAG00000009973	-	91	46.512	Xiphophorus_maculatus
ENSGACG00000012556	-	83	45.385	ENSXMAG00000009971	-	68	45.385	Xiphophorus_maculatus