EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000012697 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2043 bases
Position: chrgroupI:16493304-16495346
Accession: ZDB-GENE-040426-1116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016794	SBDS	PF01172.18	2e-33	1	1
ENSGACP00000016794	SBDS_C	PF09377.10	2.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000016828	-	1256	-	ENSGACP00000016794	249 (aa)	-	G3PGR9

Gene Model

Click here to download ENSGACG00000012697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012697	sbds	100	82.329	ENSG00000126524	SBDS	97	87.952	Homo_sapiens
ENSGACG00000012697	sbds	100	92.771	ENSAPOG00000014285	sbds	100	92.771	Acanthochromis_polyacanthus
ENSGACG00000012697	sbds	100	82.329	ENSAMEG00000018167	SBDS	99	82.329	Ailuropoda_melanoleuca
ENSGACG00000012697	sbds	100	90.873	ENSACIG00000007308	sbds	100	90.873	Amphilophus_citrinellus
ENSGACG00000012697	sbds	100	92.369	ENSAOCG00000016770	sbds	100	92.369	Amphiprion_ocellaris
ENSGACG00000012697	sbds	100	92.369	ENSAPEG00000015897	sbds	100	92.369	Amphiprion_percula
ENSGACG00000012697	sbds	100	92.369	ENSATEG00000006901	sbds	100	92.369	Anabas_testudineus
ENSGACG00000012697	sbds	83	81.068	ENSANAG00000037501	-	99	81.068	Aotus_nancymaae
ENSGACG00000012697	sbds	93	76.623	ENSANAG00000024342	-	95	79.518	Aotus_nancymaae
ENSGACG00000012697	sbds	100	92.771	ENSACLG00000018750	sbds	100	92.771	Astatotilapia_calliptera
ENSGACG00000012697	sbds	100	88.353	ENSAMXG00000005361	sbds	99	88.353	Astyanax_mexicanus
ENSGACG00000012697	sbds	100	82.329	ENSBTAG00000004051	SBDS	99	82.329	Bos_taurus
ENSGACG00000012697	sbds	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSGACG00000012697	sbds	100	82.329	ENSCJAG00000041007	SBDS	99	82.329	Callithrix_jacchus
ENSGACG00000012697	sbds	100	81.275	ENSCAFG00000010797	SBDS	99	81.275	Canis_familiaris
ENSGACG00000012697	sbds	100	82.329	ENSCAFG00020005357	SBDS	99	82.329	Canis_lupus_dingo
ENSGACG00000012697	sbds	100	82.329	ENSCHIG00000026854	SBDS	99	82.329	Capra_hircus
ENSGACG00000012697	sbds	100	82.329	ENSTSYG00000033822	SBDS	99	82.329	Carlito_syrichta
ENSGACG00000012697	sbds	65	80.368	ENSCAPG00000006634	SBDS	99	80.368	Cavia_aperea
ENSGACG00000012697	sbds	100	83.133	ENSCPOG00000036143	SBDS	99	83.133	Cavia_porcellus
ENSGACG00000012697	sbds	100	82.329	ENSCCAG00000020671	SBDS	99	82.329	Cebus_capucinus
ENSGACG00000012697	sbds	100	82.329	ENSCATG00000039026	SBDS	99	82.329	Cercocebus_atys
ENSGACG00000012697	sbds	99	58.871	ENSCLAG00000002113	-	99	58.871	Chinchilla_lanigera
ENSGACG00000012697	sbds	100	83.534	ENSCLAG00000005721	-	99	83.534	Chinchilla_lanigera
ENSGACG00000012697	sbds	100	82.329	ENSCSAG00000018275	SBDS	99	82.329	Chlorocebus_sabaeus
ENSGACG00000012697	sbds	100	77.510	ENSCHOG00000003795	SBDS	99	77.510	Choloepus_hoffmanni
ENSGACG00000012697	sbds	100	83.936	ENSCPBG00000014893	SBDS	99	83.936	Chrysemys_picta_bellii
ENSGACG00000012697	sbds	100	66.000	ENSCSAVG00000011811	-	100	66.000	Ciona_savignyi
ENSGACG00000012697	sbds	100	81.928	ENSCANG00000032368	SBDS	99	81.928	Colobus_angolensis_palliatus
ENSGACG00000012697	sbds	65	80.368	ENSCGRG00001019886	Sbds	99	80.368	Cricetulus_griseus_chok1gshd
ENSGACG00000012697	sbds	83	82.039	ENSCGRG00000009211	Sbds	99	82.039	Cricetulus_griseus_crigri
ENSGACG00000012697	sbds	100	90.361	ENSCSEG00000005798	sbds	100	90.361	Cynoglossus_semilaevis
ENSGACG00000012697	sbds	100	90.763	ENSCVAG00000001053	sbds	100	90.763	Cyprinodon_variegatus
ENSGACG00000012697	sbds	100	85.944	ENSDARG00000027803	sbds	99	85.944	Danio_rerio
ENSGACG00000012697	sbds	100	82.329	ENSDNOG00000041174	SBDS	99	82.329	Dasypus_novemcinctus
ENSGACG00000012697	sbds	100	83.534	ENSDORG00000026218	Sbds	99	83.534	Dipodomys_ordii
ENSGACG00000012697	sbds	91	60.088	FBgn0035714	CG8549	99	59.438	Drosophila_melanogaster
ENSGACG00000012697	sbds	93	57.328	ENSEBUG00000015780	sbds	99	57.328	Eptatretus_burgeri
ENSGACG00000012697	sbds	100	82.329	ENSEASG00005008821	SBDS	99	82.329	Equus_asinus_asinus
ENSGACG00000012697	sbds	100	82.329	ENSECAG00000008202	SBDS	99	82.329	Equus_caballus
ENSGACG00000012697	sbds	84	63.942	ENSEEUG00000004768	SBDS	100	63.942	Erinaceus_europaeus
ENSGACG00000012697	sbds	100	87.149	ENSELUG00000008382	sbds	99	87.149	Esox_lucius
ENSGACG00000012697	sbds	100	82.329	ENSFCAG00000022142	SBDS	99	82.329	Felis_catus
ENSGACG00000012697	sbds	100	83.534	ENSFALG00000013808	SBDS	99	83.534	Ficedula_albicollis
ENSGACG00000012697	sbds	100	83.133	ENSFDAG00000018947	-	99	83.133	Fukomys_damarensis
ENSGACG00000012697	sbds	100	85.141	ENSFHEG00000000708	sbds	99	85.830	Fundulus_heteroclitus
ENSGACG00000012697	sbds	100	89.157	ENSGMOG00000018356	sbds	99	89.157	Gadus_morhua
ENSGACG00000012697	sbds	100	81.124	ENSGALG00000027989	SBDS	99	81.124	Gallus_gallus
ENSGACG00000012697	sbds	92	86.522	ENSGAFG00000014204	sbds	100	86.522	Gambusia_affinis
ENSGACG00000012697	sbds	86	84.038	ENSGAGG00000022402	SBDS	99	84.038	Gopherus_agassizii
ENSGACG00000012697	sbds	96	63.750	ENSGGOG00000040023	-	92	63.750	Gorilla_gorilla
ENSGACG00000012697	sbds	100	92.771	ENSHBUG00000002660	sbds	100	92.771	Haplochromis_burtoni
ENSGACG00000012697	sbds	100	81.928	ENSHGLG00000009671	SBDS	99	81.928	Heterocephalus_glaber_female
ENSGACG00000012697	sbds	100	81.928	ENSHGLG00100011332	SBDS	99	81.928	Heterocephalus_glaber_male
ENSGACG00000012697	sbds	100	86.747	ENSHCOG00000018606	sbds	100	86.747	Hippocampus_comes
ENSGACG00000012697	sbds	100	88.353	ENSIPUG00000006536	sbds	99	88.353	Ictalurus_punctatus
ENSGACG00000012697	sbds	100	79.920	ENSJJAG00000012033	-	99	79.920	Jaculus_jaculus
ENSGACG00000012697	sbds	100	60.714	ENSJJAG00000003934	-	99	60.714	Jaculus_jaculus
ENSGACG00000012697	sbds	100	90.361	ENSKMAG00000018542	sbds	100	90.361	Kryptolebias_marmoratus
ENSGACG00000012697	sbds	100	89.157	ENSLBEG00000016687	sbds	100	89.157	Labrus_bergylta
ENSGACG00000012697	sbds	100	69.960	ENSLACG00000018916	SBDS	99	69.960	Latimeria_chalumnae
ENSGACG00000012697	sbds	100	88.755	ENSLOCG00000004073	sbds	99	88.755	Lepisosteus_oculatus
ENSGACG00000012697	sbds	100	81.928	ENSLAFG00000008763	SBDS	99	81.928	Loxodonta_africana
ENSGACG00000012697	sbds	100	82.329	ENSMFAG00000032620	SBDS	99	82.329	Macaca_fascicularis
ENSGACG00000012697	sbds	100	82.329	ENSMMUG00000045653	SBDS	99	82.329	Macaca_mulatta
ENSGACG00000012697	sbds	100	82.329	ENSMNEG00000031523	SBDS	99	82.329	Macaca_nemestrina
ENSGACG00000012697	sbds	100	65.613	ENSMLEG00000036826	SBDS	99	65.613	Mandrillus_leucophaeus
ENSGACG00000012697	sbds	100	91.968	ENSMAMG00000016062	sbds	100	91.968	Mastacembelus_armatus
ENSGACG00000012697	sbds	100	92.771	ENSMZEG00005024385	sbds	100	92.771	Maylandia_zebra
ENSGACG00000012697	sbds	100	81.124	ENSMGAG00000002119	SBDS	99	81.124	Meleagris_gallopavo
ENSGACG00000012697	sbds	100	67.068	ENSMAUG00000022214	-	100	67.068	Mesocricetus_auratus
ENSGACG00000012697	sbds	100	82.329	ENSMICG00000014366	SBDS	99	82.329	Microcebus_murinus
ENSGACG00000012697	sbds	100	82.731	ENSMOCG00000011739	Sbds	99	82.731	Microtus_ochrogaster
ENSGACG00000012697	sbds	100	80.400	ENSMMOG00000005061	sbds	100	80.400	Mola_mola
ENSGACG00000012697	sbds	100	83.936	ENSMODG00000006644	SBDS	99	83.936	Monodelphis_domestica
ENSGACG00000012697	sbds	100	90.763	ENSMALG00000010219	sbds	100	90.763	Monopterus_albus
ENSGACG00000012697	sbds	100	83.534	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSGACG00000012697	sbds	100	83.936	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSGACG00000012697	sbds	100	83.534	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSGACG00000012697	sbds	100	83.936	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSGACG00000012697	sbds	67	80.838	ENSMPUG00000016192	SBDS	96	80.838	Mustela_putorius_furo
ENSGACG00000012697	sbds	73	77.901	ENSMLUG00000013575	SBDS	99	77.901	Myotis_lucifugus
ENSGACG00000012697	sbds	100	82.731	ENSNGAG00000012093	Sbds	99	82.731	Nannospalax_galili
ENSGACG00000012697	sbds	100	92.771	ENSNBRG00000017027	sbds	100	92.771	Neolamprologus_brichardi
ENSGACG00000012697	sbds	100	82.329	ENSNLEG00000013288	SBDS	99	82.329	Nomascus_leucogenys
ENSGACG00000012697	sbds	100	83.133	ENSOPRG00000008721	SBDS	99	83.133	Ochotona_princeps
ENSGACG00000012697	sbds	100	65.060	ENSODEG00000001116	-	99	65.060	Octodon_degus
ENSGACG00000012697	sbds	100	63.454	ENSODEG00000000137	-	84	66.265	Octodon_degus
ENSGACG00000012697	sbds	100	74.699	ENSODEG00000019253	-	84	74.699	Octodon_degus
ENSGACG00000012697	sbds	100	93.574	ENSONIG00000005874	sbds	100	93.574	Oreochromis_niloticus
ENSGACG00000012697	sbds	83	82.524	ENSOANG00000007674	-	99	82.524	Ornithorhynchus_anatinus
ENSGACG00000012697	sbds	100	83.534	ENSOCUG00000003170	SBDS	99	83.534	Oryctolagus_cuniculus
ENSGACG00000012697	sbds	100	87.952	ENSORLG00000023489	sbds	100	87.952	Oryzias_latipes
ENSGACG00000012697	sbds	100	87.550	ENSORLG00020019282	sbds	100	87.550	Oryzias_latipes_hni
ENSGACG00000012697	sbds	100	87.550	ENSORLG00015008005	sbds	100	87.550	Oryzias_latipes_hsok
ENSGACG00000012697	sbds	100	88.353	ENSOMEG00000022747	sbds	100	88.353	Oryzias_melastigma
ENSGACG00000012697	sbds	100	69.076	ENSOGAG00000015036	-	99	69.076	Otolemur_garnettii
ENSGACG00000012697	sbds	100	82.731	ENSOGAG00000009011	-	99	82.731	Otolemur_garnettii
ENSGACG00000012697	sbds	100	82.329	ENSOARG00000010609	SBDS	99	82.329	Ovis_aries
ENSGACG00000012697	sbds	100	81.526	ENSPPAG00000043889	-	99	81.526	Pan_paniscus
ENSGACG00000012697	sbds	100	82.329	ENSPPRG00000002307	SBDS	99	82.329	Panthera_pardus
ENSGACG00000012697	sbds	100	82.329	ENSPTIG00000021308	SBDS	99	82.329	Panthera_tigris_altaica
ENSGACG00000012697	sbds	100	82.329	ENSPTRG00000019254	SBDS	99	82.329	Pan_troglodytes
ENSGACG00000012697	sbds	100	68.675	ENSPTRG00000050835	-	99	68.675	Pan_troglodytes
ENSGACG00000012697	sbds	87	80.645	ENSPTRG00000048174	-	96	80.645	Pan_troglodytes
ENSGACG00000012697	sbds	100	68.675	ENSPTRG00000047744	-	99	68.675	Pan_troglodytes
ENSGACG00000012697	sbds	100	82.329	ENSPANG00000004078	SBDS	99	82.329	Papio_anubis
ENSGACG00000012697	sbds	100	89.960	ENSPKIG00000006489	sbds	99	89.960	Paramormyrops_kingsleyae
ENSGACG00000012697	sbds	83	82.609	ENSPSIG00000014603	SBDS	99	82.609	Pelodiscus_sinensis
ENSGACG00000012697	sbds	100	91.566	ENSPMGG00000004246	sbds	100	91.566	Periophthalmus_magnuspinnatus
ENSGACG00000012697	sbds	100	82.731	ENSPEMG00000008728	Sbds	99	82.731	Peromyscus_maniculatus_bairdii
ENSGACG00000012697	sbds	100	83.936	ENSPCIG00000029718	SBDS	99	83.936	Phascolarctos_cinereus
ENSGACG00000012697	sbds	100	87.550	ENSPFOG00000015837	sbds	100	87.550	Poecilia_formosa
ENSGACG00000012697	sbds	100	87.952	ENSPLAG00000003641	sbds	100	87.952	Poecilia_latipinna
ENSGACG00000012697	sbds	100	87.550	ENSPMEG00000019483	sbds	100	87.550	Poecilia_mexicana
ENSGACG00000012697	sbds	100	87.550	ENSPREG00000018758	sbds	100	87.550	Poecilia_reticulata
ENSGACG00000012697	sbds	100	82.329	ENSPPYG00000017513	SBDS	99	82.329	Pongo_abelii
ENSGACG00000012697	sbds	100	81.928	ENSPCOG00000021098	SBDS	99	81.928	Propithecus_coquereli
ENSGACG00000012697	sbds	100	82.731	ENSPVAG00000009369	SBDS	99	82.731	Pteropus_vampyrus
ENSGACG00000012697	sbds	100	93.173	ENSPNYG00000022403	sbds	100	93.173	Pundamilia_nyererei
ENSGACG00000012697	sbds	100	89.558	ENSPNAG00000001120	sbds	99	89.558	Pygocentrus_nattereri
ENSGACG00000012697	sbds	100	83.534	ENSRNOG00000000888	Sbds	99	83.534	Rattus_norvegicus
ENSGACG00000012697	sbds	100	82.329	ENSRBIG00000035557	SBDS	99	82.329	Rhinopithecus_bieti
ENSGACG00000012697	sbds	100	67.871	ENSRROG00000041986	-	99	67.871	Rhinopithecus_roxellana
ENSGACG00000012697	sbds	100	82.329	ENSRROG00000040842	-	99	82.329	Rhinopithecus_roxellana
ENSGACG00000012697	sbds	96	41.870	YLR022C	-	96	41.870	Saccharomyces_cerevisiae
ENSGACG00000012697	sbds	93	80.087	ENSSBOG00000022460	SBDS	99	80.087	Saimiri_boliviensis_boliviensis
ENSGACG00000012697	sbds	100	71.888	ENSSHAG00000010263	SBDS	99	71.888	Sarcophilus_harrisii
ENSGACG00000012697	sbds	100	88.755	ENSSFOG00015001108	sbds	99	88.755	Scleropages_formosus
ENSGACG00000012697	sbds	100	93.574	ENSSMAG00000020506	sbds	100	93.574	Scophthalmus_maximus
ENSGACG00000012697	sbds	100	91.165	ENSSDUG00000001528	sbds	100	91.165	Seriola_dumerili
ENSGACG00000012697	sbds	100	90.763	ENSSLDG00000003659	sbds	100	90.763	Seriola_lalandi_dorsalis
ENSGACG00000012697	sbds	61	87.582	ENSSARG00000013132	-	100	87.582	Sorex_araneus
ENSGACG00000012697	sbds	73	89.535	ENSSARG00000001899	-	73	89.535	Sorex_araneus
ENSGACG00000012697	sbds	100	82.731	ENSSPUG00000002699	SBDS	99	82.731	Sphenodon_punctatus
ENSGACG00000012697	sbds	100	92.369	ENSSPAG00000016419	sbds	100	84.800	Stegastes_partitus
ENSGACG00000012697	sbds	100	82.329	ENSSSCG00000007732	SBDS	99	82.329	Sus_scrofa
ENSGACG00000012697	sbds	66	84.146	ENSTGUG00000003426	SBDS	99	84.146	Taeniopygia_guttata
ENSGACG00000012697	sbds	100	91.968	ENSTRUG00000021443	sbds	100	91.968	Takifugu_rubripes
ENSGACG00000012697	sbds	100	91.968	ENSTNIG00000019000	sbds	100	91.968	Tetraodon_nigroviridis
ENSGACG00000012697	sbds	84	69.231	ENSTBEG00000001178	SBDS	100	69.231	Tupaia_belangeri
ENSGACG00000012697	sbds	100	64.257	ENSTTRG00000003921	SBDS	99	64.257	Tursiops_truncatus
ENSGACG00000012697	sbds	100	82.329	ENSUAMG00000001326	SBDS	99	82.329	Ursus_americanus
ENSGACG00000012697	sbds	100	82.329	ENSUMAG00000015353	SBDS	99	82.329	Ursus_maritimus
ENSGACG00000012697	sbds	100	82.329	ENSVVUG00000016478	SBDS	99	82.329	Vulpes_vulpes
ENSGACG00000012697	sbds	100	82.731	ENSXETG00000010093	sbds	99	82.731	Xenopus_tropicalis
ENSGACG00000012697	sbds	100	77.912	ENSXCOG00000010639	sbds	100	77.912	Xiphophorus_couchianus
ENSGACG00000012697	sbds	100	87.952	ENSXMAG00000006065	sbds	100	87.952	Xiphophorus_maculatus