EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000012858 (Gene tree)
Gene ID: -
Gene Symbol: rps29
Alias: zgc:113935
Full Name: ribosomal protein S29
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 890 bases
Position: chrgroupXVIII:14743704-14744593
Accession: ZDB-GENE-040622-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000016994	Ribosomal_S14	PF00253.21	1.7e-16	1	1
ENSGACP00000016990	Ribosomal_S14	PF00253.21	1.6e-15	1	1
ENSGACP00000016988	Ribosomal_S14	PF00253.21	3.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017022	-	187	-	ENSGACP00000016988	56 (aa)	-	G3PHB3
ENSGACT00000017028	-	248	-	ENSGACP00000016994	78 (aa)	-	G3PHB9
ENSGACT00000017024	-	277	-	ENSGACP00000016990	56 (aa)	-	G3PHB5

Gene Model

Click here to download ENSGACG00000012858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012858	rps29	100	94.643	ENSACIG00000003518	rps29	79	93.220	Amphilophus_citrinellus
ENSGACG00000012858	rps29	98	98.182	ENSANAG00000024423	-	100	98.182	Aotus_nancymaae
ENSGACG00000012858	rps29	88	71.429	ENSACLG00000000915	rps29	64	70.370	Astatotilapia_calliptera
ENSGACG00000012858	rps29	100	98.214	ENSBTAG00000052337	RPS29	100	98.214	Bos_taurus
ENSGACG00000012858	rps29	100	89.286	ENSCJAG00000031814	-	100	89.286	Callithrix_jacchus
ENSGACG00000012858	rps29	100	98.214	ENSCJAG00000039096	-	100	98.214	Callithrix_jacchus
ENSGACG00000012858	rps29	98	76.364	ENSCAFG00020021989	-	72	60.256	Canis_lupus_dingo
ENSGACG00000012858	rps29	100	91.071	ENSCAFG00020003021	-	100	91.071	Canis_lupus_dingo
ENSGACG00000012858	rps29	100	82.143	ENSCAFG00020002956	-	100	82.143	Canis_lupus_dingo
ENSGACG00000012858	rps29	100	92.857	ENSCHIG00000010682	-	100	92.857	Capra_hircus
ENSGACG00000012858	rps29	100	98.214	ENSTSYG00000030415	-	100	98.214	Carlito_syrichta
ENSGACG00000012858	rps29	100	75.000	ENSTSYG00000012410	-	100	75.000	Carlito_syrichta
ENSGACG00000012858	rps29	100	98.214	ENSCPOG00000032637	-	100	98.214	Cavia_porcellus
ENSGACG00000012858	rps29	100	98.214	ENSCCAG00000032090	-	100	98.214	Cebus_capucinus
ENSGACG00000012858	rps29	100	98.214	ENSCCAG00000001210	-	100	98.214	Cebus_capucinus
ENSGACG00000012858	rps29	100	96.429	ENSCCAG00000020608	-	100	96.429	Cebus_capucinus
ENSGACG00000012858	rps29	100	98.214	ENSCCAG00000019033	-	100	98.214	Cebus_capucinus
ENSGACG00000012858	rps29	100	96.429	ENSCCAG00000019847	-	100	96.429	Cebus_capucinus
ENSGACG00000012858	rps29	100	96.429	ENSCCAG00000032225	-	100	96.429	Cebus_capucinus
ENSGACG00000012858	rps29	100	69.643	ENSCATG00000041319	-	100	69.643	Cercocebus_atys
ENSGACG00000012858	rps29	100	98.214	ENSCATG00000011469	-	100	98.214	Cercocebus_atys
ENSGACG00000012858	rps29	100	98.214	ENSCATG00000017816	-	100	98.214	Cercocebus_atys
ENSGACG00000012858	rps29	100	98.214	ENSCSAG00000015276	-	100	98.214	Chlorocebus_sabaeus
ENSGACG00000012858	rps29	91	74.510	ENSCHOG00000011358	-	93	74.510	Choloepus_hoffmanni
ENSGACG00000012858	rps29	98	74.545	ENSCPBG00000015078	-	68	72.414	Chrysemys_picta_bellii
ENSGACG00000012858	rps29	100	89.286	ENSCPBG00000019385	-	100	89.286	Chrysemys_picta_bellii
ENSGACG00000012858	rps29	100	98.214	ENSCPBG00000018320	-	100	98.214	Chrysemys_picta_bellii
ENSGACG00000012858	rps29	100	96.429	ENSCANG00000010019	-	100	96.429	Colobus_angolensis_palliatus
ENSGACG00000012858	rps29	100	98.214	ENSCANG00000037526	-	100	98.214	Colobus_angolensis_palliatus
ENSGACG00000012858	rps29	100	98.214	ENSCANG00000019407	-	100	98.214	Colobus_angolensis_palliatus
ENSGACG00000012858	rps29	100	87.500	ENSCGRG00001010167	-	100	87.500	Cricetulus_griseus_chok1gshd
ENSGACG00000012858	rps29	100	85.714	ENSCGRG00001005461	-	100	85.714	Cricetulus_griseus_chok1gshd
ENSGACG00000012858	rps29	100	98.214	ENSCGRG00001020113	Rps29	100	98.214	Cricetulus_griseus_chok1gshd
ENSGACG00000012858	rps29	100	80.357	ENSCGRG00001000990	-	66	80.357	Cricetulus_griseus_chok1gshd
ENSGACG00000012858	rps29	100	96.429	ENSCGRG00001001537	-	92	96.429	Cricetulus_griseus_chok1gshd
ENSGACG00000012858	rps29	100	80.357	ENSCGRG00000019197	-	66	80.357	Cricetulus_griseus_crigri
ENSGACG00000012858	rps29	100	85.714	ENSCGRG00000019460	-	100	85.714	Cricetulus_griseus_crigri
ENSGACG00000012858	rps29	100	87.500	ENSCGRG00000019055	-	100	87.500	Cricetulus_griseus_crigri
ENSGACG00000012858	rps29	100	96.429	ENSCGRG00000018591	-	92	96.429	Cricetulus_griseus_crigri
ENSGACG00000012858	rps29	100	71.429	ENSCGRG00000009208	-	100	71.429	Cricetulus_griseus_crigri
ENSGACG00000012858	rps29	100	98.214	ENSCSEG00000001818	rps29	62	98.214	Cynoglossus_semilaevis
ENSGACG00000012858	rps29	100	98.214	ENSDARG00000041232	rps29	100	98.214	Danio_rerio
ENSGACG00000012858	rps29	100	83.333	ENSDORG00000013874	-	100	83.333	Dipodomys_ordii
ENSGACG00000012858	rps29	100	94.643	ENSDORG00000028731	-	100	94.643	Dipodomys_ordii
ENSGACG00000012858	rps29	100	89.286	ENSDORG00000026532	-	100	89.286	Dipodomys_ordii
ENSGACG00000012858	rps29	100	83.929	ENSEBUG00000011966	rps29	66	84.211	Eptatretus_burgeri
ENSGACG00000012858	rps29	98	65.455	ENSEASG00005020582	-	95	65.455	Equus_asinus_asinus
ENSGACG00000012858	rps29	98	98.182	ENSEASG00005007821	-	74	90.323	Equus_asinus_asinus
ENSGACG00000012858	rps29	98	98.182	ENSECAG00000011782	RPS29	74	90.323	Equus_caballus
ENSGACG00000012858	rps29	100	78.571	ENSFCAG00000024162	-	100	78.571	Felis_catus
ENSGACG00000012858	rps29	100	98.214	ENSFALG00000001808	-	92	98.214	Ficedula_albicollis
ENSGACG00000012858	rps29	100	98.214	ENSFALG00000001738	-	92	98.214	Ficedula_albicollis
ENSGACG00000012858	rps29	98	83.636	ENSGAGG00000016743	-	92	83.636	Gopherus_agassizii
ENSGACG00000012858	rps29	84	93.617	ENSGAGG00000025088	-	57	93.617	Gopherus_agassizii
ENSGACG00000012858	rps29	100	98.214	ENSGGOG00000042996	-	100	98.214	Gorilla_gorilla
ENSGACG00000012858	rps29	100	94.643	ENSGGOG00000042896	-	100	94.643	Gorilla_gorilla
ENSGACG00000012858	rps29	100	98.214	ENSHBUG00000018115	rps29	100	98.214	Haplochromis_burtoni
ENSGACG00000012858	rps29	100	80.357	ENSJJAG00000011627	-	100	80.357	Jaculus_jaculus
ENSGACG00000012858	rps29	100	98.214	ENSLAFG00000031145	-	100	98.214	Loxodonta_africana
ENSGACG00000012858	rps29	100	98.214	ENSMFAG00000026635	-	100	98.214	Macaca_fascicularis
ENSGACG00000012858	rps29	100	85.714	ENSMMUG00000043202	-	100	85.714	Macaca_mulatta
ENSGACG00000012858	rps29	100	91.071	ENSMMUG00000032153	-	100	91.071	Macaca_mulatta
ENSGACG00000012858	rps29	100	96.429	ENSMMUG00000040278	-	100	96.429	Macaca_mulatta
ENSGACG00000012858	rps29	100	98.214	ENSMMUG00000043502	-	100	98.214	Macaca_mulatta
ENSGACG00000012858	rps29	100	98.214	ENSMMUG00000008939	-	100	98.214	Macaca_mulatta
ENSGACG00000012858	rps29	100	98.214	ENSMNEG00000027952	-	100	98.214	Macaca_nemestrina
ENSGACG00000012858	rps29	100	98.214	ENSMNEG00000037893	-	100	98.214	Macaca_nemestrina
ENSGACG00000012858	rps29	100	96.429	ENSMLEG00000026733	-	100	96.429	Mandrillus_leucophaeus
ENSGACG00000012858	rps29	100	98.214	ENSMZEG00005012261	rps29	100	98.214	Maylandia_zebra
ENSGACG00000012858	rps29	100	98.214	ENSMGAG00000013705	-	100	98.214	Meleagris_gallopavo
ENSGACG00000012858	rps29	98	85.455	ENSMAUG00000019410	-	100	85.455	Mesocricetus_auratus
ENSGACG00000012858	rps29	100	87.500	ENSMAUG00000005362	-	100	87.500	Mesocricetus_auratus
ENSGACG00000012858	rps29	63	97.143	ENSMAUG00000000899	-	100	97.143	Mesocricetus_auratus
ENSGACG00000012858	rps29	100	98.214	ENSMICG00000045654	-	100	98.214	Microcebus_murinus
ENSGACG00000012858	rps29	100	94.643	ENSMICG00000041582	-	100	94.643	Microcebus_murinus
ENSGACG00000012858	rps29	100	98.214	ENSMOCG00000017681	Rps29	100	98.214	Microtus_ochrogaster
ENSGACG00000012858	rps29	96	98.148	ENSMMOG00000005119	rps29	51	98.148	Mola_mola
ENSGACG00000012858	rps29	100	87.500	ENSMODG00000025305	-	100	87.500	Monodelphis_domestica
ENSGACG00000012858	rps29	100	98.214	MGP_CAROLIEiJ_G0017795	-	100	98.214	Mus_caroli
ENSGACG00000012858	rps29	100	98.214	ENSMUSG00000034892	Rps29	100	98.214	Mus_musculus
ENSGACG00000012858	rps29	100	98.214	MGP_PahariEiJ_G0029551	-	100	98.214	Mus_pahari
ENSGACG00000012858	rps29	100	98.214	MGP_SPRETEiJ_G0018641	Rps29	100	98.214	Mus_spretus
ENSGACG00000012858	rps29	100	89.286	MGP_SPRETEiJ_G0019597	-	92	89.286	Mus_spretus
ENSGACG00000012858	rps29	98	98.182	ENSMLUG00000025007	-	100	98.182	Myotis_lucifugus
ENSGACG00000012858	rps29	100	89.286	ENSMLUG00000029871	-	100	89.286	Myotis_lucifugus
ENSGACG00000012858	rps29	100	98.214	ENSMLUG00000025262	-	100	98.214	Myotis_lucifugus
ENSGACG00000012858	rps29	100	78.571	ENSNGAG00000011632	-	100	78.571	Nannospalax_galili
ENSGACG00000012858	rps29	100	98.214	ENSNGAG00000013159	Rps29	100	98.214	Nannospalax_galili
ENSGACG00000012858	rps29	100	94.643	ENSNBRG00000021854	rps29	75	93.333	Neolamprologus_brichardi
ENSGACG00000012858	rps29	100	76.786	ENSNLEG00000031810	-	64	76.786	Nomascus_leucogenys
ENSGACG00000012858	rps29	100	96.429	ENSNLEG00000018259	-	100	96.429	Nomascus_leucogenys
ENSGACG00000012858	rps29	100	98.214	ENSODEG00000019220	-	100	98.214	Octodon_degus
ENSGACG00000012858	rps29	100	91.071	ENSODEG00000019457	-	100	91.071	Octodon_degus
ENSGACG00000012858	rps29	100	94.643	ENSODEG00000019960	-	100	94.643	Octodon_degus
ENSGACG00000012858	rps29	100	98.214	ENSODEG00000018519	-	100	98.214	Octodon_degus
ENSGACG00000012858	rps29	93	92.308	ENSODEG00000019249	-	100	92.308	Octodon_degus
ENSGACG00000012858	rps29	100	98.214	ENSONIG00000000829	rps29	100	98.214	Oreochromis_niloticus
ENSGACG00000012858	rps29	100	98.214	ENSOCUG00000027423	RPS29	100	98.214	Oryctolagus_cuniculus
ENSGACG00000012858	rps29	98	98.182	ENSOMEG00000010831	rps29	93	77.027	Oryzias_melastigma
ENSGACG00000012858	rps29	100	87.500	ENSOGAG00000032475	-	100	87.500	Otolemur_garnettii
ENSGACG00000012858	rps29	100	87.500	ENSOGAG00000033843	-	100	87.500	Otolemur_garnettii
ENSGACG00000012858	rps29	100	89.286	ENSOARG00000007891	-	92	89.286	Ovis_aries
ENSGACG00000012858	rps29	100	96.429	ENSPPRG00000011061	-	100	96.429	Panthera_pardus
ENSGACG00000012858	rps29	100	98.214	ENSPPRG00000022391	-	100	98.214	Panthera_pardus
ENSGACG00000012858	rps29	100	76.786	ENSPPRG00000017352	-	100	76.786	Panthera_pardus
ENSGACG00000012858	rps29	100	98.214	ENSPTIG00000006207	-	100	98.214	Panthera_tigris_altaica
ENSGACG00000012858	rps29	100	87.500	ENSPANG00000029212	-	100	87.500	Papio_anubis
ENSGACG00000012858	rps29	100	98.214	ENSPANG00000023730	-	100	98.214	Papio_anubis
ENSGACG00000012858	rps29	100	98.214	ENSPANG00000033247	-	100	98.214	Papio_anubis
ENSGACG00000012858	rps29	100	98.214	ENSPPYG00000005785	RPS29	100	98.214	Pongo_abelii
ENSGACG00000012858	rps29	100	83.929	ENSPCOG00000015576	-	100	83.929	Propithecus_coquereli
ENSGACG00000012858	rps29	100	98.214	ENSPCOG00000024671	-	100	98.214	Propithecus_coquereli
ENSGACG00000012858	rps29	100	98.214	ENSRNOG00000028939	Rps29	100	98.214	Rattus_norvegicus
ENSGACG00000012858	rps29	100	98.214	ENSRNOG00000032542	LOC108351482	100	98.214	Rattus_norvegicus
ENSGACG00000012858	rps29	100	98.214	ENSRNOG00000004196	LOC108350501	100	98.214	Rattus_norvegicus
ENSGACG00000012858	rps29	100	98.214	ENSRNOG00000029443	LOC108352650	100	98.214	Rattus_norvegicus
ENSGACG00000012858	rps29	100	96.429	ENSRBIG00000007567	-	100	96.429	Rhinopithecus_bieti
ENSGACG00000012858	rps29	100	96.429	ENSRBIG00000011261	-	100	96.429	Rhinopithecus_bieti
ENSGACG00000012858	rps29	100	98.214	ENSRBIG00000016462	-	100	98.214	Rhinopithecus_bieti
ENSGACG00000012858	rps29	100	96.429	ENSRBIG00000020563	-	100	96.429	Rhinopithecus_bieti
ENSGACG00000012858	rps29	100	98.214	ENSRBIG00000017110	-	100	98.214	Rhinopithecus_bieti
ENSGACG00000012858	rps29	100	98.214	ENSRROG00000037175	-	100	98.214	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	98.214	ENSRROG00000009364	-	100	98.214	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	98.214	ENSRROG00000020854	-	100	98.214	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	94.643	ENSRROG00000017887	-	100	94.643	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	98.214	ENSRROG00000011987	-	100	98.214	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	98.214	ENSRROG00000009633	-	100	98.214	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	96.429	ENSRROG00000015879	-	100	96.429	Rhinopithecus_roxellana
ENSGACG00000012858	rps29	100	94.643	ENSSBOG00000009349	-	100	94.643	Saimiri_boliviensis_boliviensis
ENSGACG00000012858	rps29	100	96.429	ENSSBOG00000012724	-	100	96.429	Saimiri_boliviensis_boliviensis
ENSGACG00000012858	rps29	100	96.429	ENSSBOG00000019207	-	100	96.429	Saimiri_boliviensis_boliviensis
ENSGACG00000012858	rps29	63	97.143	ENSSBOG00000029046	-	66	97.143	Saimiri_boliviensis_boliviensis
ENSGACG00000012858	rps29	98	98.182	ENSSFOG00015000394	-	73	98.182	Scleropages_formosus
ENSGACG00000012858	rps29	100	96.429	ENSSDUG00000009578	rps29	71	92.063	Seriola_dumerili
ENSGACG00000012858	rps29	61	97.059	ENSSLDG00000000160	-	55	84.783	Seriola_lalandi_dorsalis
ENSGACG00000012858	rps29	100	98.214	ENSSSCG00000038507	-	100	98.214	Sus_scrofa
ENSGACG00000012858	rps29	100	76.786	ENSSSCG00000001855	-	100	76.786	Sus_scrofa
ENSGACG00000012858	rps29	100	85.714	ENSSSCG00000035779	-	100	85.714	Sus_scrofa
ENSGACG00000012858	rps29	100	82.143	ENSSSCG00000037150	-	100	82.143	Sus_scrofa
ENSGACG00000012858	rps29	100	91.071	ENSUAMG00000002506	-	100	91.071	Ursus_americanus
ENSGACG00000012858	rps29	71	85.000	ENSUAMG00000005201	-	75	85.000	Ursus_americanus
ENSGACG00000012858	rps29	100	78.571	ENSUAMG00000003050	-	100	78.571	Ursus_americanus
ENSGACG00000012858	rps29	100	98.214	ENSUAMG00000022821	-	100	98.214	Ursus_americanus
ENSGACG00000012858	rps29	100	92.857	ENSUAMG00000016993	-	100	92.857	Ursus_americanus
ENSGACG00000012858	rps29	98	96.364	ENSUAMG00000012422	-	54	96.364	Ursus_americanus
ENSGACG00000012858	rps29	100	92.857	ENSUMAG00000019137	-	100	92.857	Ursus_maritimus
ENSGACG00000012858	rps29	100	78.571	ENSUMAG00000008130	-	100	78.571	Ursus_maritimus
ENSGACG00000012858	rps29	98	96.364	ENSUMAG00000007648	-	54	96.364	Ursus_maritimus
ENSGACG00000012858	rps29	100	89.286	ENSUMAG00000012903	-	100	89.286	Ursus_maritimus
ENSGACG00000012858	rps29	100	85.714	ENSVVUG00000016811	-	100	85.714	Vulpes_vulpes
ENSGACG00000012858	rps29	98	76.364	ENSVVUG00000029871	-	75	60.256	Vulpes_vulpes
ENSGACG00000012858	rps29	100	92.857	ENSVVUG00000000785	-	100	92.857	Vulpes_vulpes
ENSGACG00000012858	rps29	100	98.214	ENSXETG00000027734	rps29	100	98.214	Xenopus_tropicalis
ENSGACG00000012858	rps29	100	96.429	ENSXCOG00000007248	rps29	77	95.000	Xiphophorus_couchianus
ENSGACG00000012858	rps29	80	97.778	ENSXMAG00000019760	-	80	97.778	Xiphophorus_maculatus