EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000012961 (Gene tree)
Gene ID: -
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3361 bases
Position: chrgroupXI:12598339-12601699
Accession: ZDB-GENE-050320-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017155	GTP_EFTU	PF00009.27	1.1e-55	1	1
ENSGACP00000017152	GTP_EFTU	PF00009.27	1.9e-55	1	1
ENSGACP00000017155	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSGACP00000017152	GTP_EFTU_D2	PF03144.25	1.6e-16	1	1
ENSGACP00000017152	GTP_EFTU_D3	PF03143.17	4.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017189	-	1528	-	ENSGACP00000017155	349 (aa)	-	G3PHS9
ENSGACT00000017186	-	1536	-	ENSGACP00000017152	445 (aa)	-	G3PHS6

Gene Model

Click here to download ENSGACG00000012961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000012961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000012961	tufm	88	34.670	ENSGACG00000002182	-	95	32.287
ENSGACG00000012961	tufm	88	34.286	ENSGACG00000018090	eef1a1b	94	31.011
ENSGACG00000012961	tufm	88	34.670	ENSGACG00000002143	-	96	31.556
ENSGACG00000012961	tufm	88	34.097	ENSGACG00000004505	si:dkey-37o8.1	96	31.027
ENSGACG00000012961	tufm	88	30.769	ENSGACG00000011035	hbs1l	51	30.769
ENSGACG00000012961	tufm	88	33.333	ENSGACG00000002175	-	95	30.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000012961	tufm	92	81.056	ENSG00000178952	TUFM	93	77.962	Homo_sapiens
ENSGACG00000012961	tufm	100	92.152	ENSAPOG00000013385	tufm	100	92.152	Acanthochromis_polyacanthus
ENSGACG00000012961	tufm	94	80.793	ENSAMEG00000015551	TUFM	93	78.385	Ailuropoda_melanoleuca
ENSGACG00000012961	tufm	95	91.239	ENSACIG00000007388	tufm	97	90.261	Amphilophus_citrinellus
ENSGACG00000012961	tufm	100	91.928	ENSAOCG00000001032	tufm	100	91.928	Amphiprion_ocellaris
ENSGACG00000012961	tufm	100	91.928	ENSAPEG00000015751	tufm	100	91.928	Amphiprion_percula
ENSGACG00000012961	tufm	100	90.807	ENSATEG00000002905	tufm	97	90.807	Anabas_testudineus
ENSGACG00000012961	tufm	92	82.609	ENSACAG00000005399	TUFM	89	80.488	Anolis_carolinensis
ENSGACG00000012961	tufm	97	75.221	ENSANAG00000022206	TUFM	93	74.822	Aotus_nancymaae
ENSGACG00000012961	tufm	100	91.480	ENSACLG00000007403	tufm	93	91.480	Astatotilapia_calliptera
ENSGACG00000012961	tufm	94	80.183	ENSBTAG00000019216	TUFM	93	77.672	Bos_taurus
ENSGACG00000012961	tufm	90	61.371	WBGene00007000	tufm-1	80	58.250	Caenorhabditis_elegans
ENSGACG00000012961	tufm	97	75.516	ENSCJAG00000006236	TUFM	93	75.059	Callithrix_jacchus
ENSGACG00000012961	tufm	99	75.388	ENSCAFG00000017216	TUFM	93	78.147	Canis_familiaris
ENSGACG00000012961	tufm	99	75.388	ENSCAFG00020017574	TUFM	93	78.147	Canis_lupus_dingo
ENSGACG00000012961	tufm	94	80.488	ENSCHIG00000020583	TUFM	93	77.910	Capra_hircus
ENSGACG00000012961	tufm	100	75.221	ENSTSYG00000026053	TUFM	93	77.725	Carlito_syrichta
ENSGACG00000012961	tufm	94	80.793	ENSCPOG00000010534	TUFM	93	78.385	Cavia_porcellus
ENSGACG00000012961	tufm	97	75.221	ENSCCAG00000033296	TUFM	93	74.822	Cebus_capucinus
ENSGACG00000012961	tufm	94	80.183	ENSCATG00000035822	TUFM	93	77.672	Cercocebus_atys
ENSGACG00000012961	tufm	99	76.339	ENSCLAG00000013969	TUFM	92	79.187	Chinchilla_lanigera
ENSGACG00000012961	tufm	94	79.878	ENSCSAG00000006314	TUFM	93	77.197	Chlorocebus_sabaeus
ENSGACG00000012961	tufm	100	75.221	ENSCHOG00000009077	TUFM	93	77.962	Choloepus_hoffmanni
ENSGACG00000012961	tufm	96	82.335	ENSCPBG00000003874	TUFM	91	80.907	Chrysemys_picta_bellii
ENSGACG00000012961	tufm	91	62.025	ENSCING00000002841	-	94	58.416	Ciona_intestinalis
ENSGACG00000012961	tufm	93	61.728	ENSCSAVG00000009380	-	88	58.537	Ciona_savignyi
ENSGACG00000012961	tufm	100	74.723	ENSCANG00000035829	TUFM	93	77.251	Colobus_angolensis_palliatus
ENSGACG00000012961	tufm	94	79.878	ENSCGRG00001022949	Tufm	93	77.435	Cricetulus_griseus_chok1gshd
ENSGACG00000012961	tufm	97	51.884	ENSCGRG00000013193	-	91	54.327	Cricetulus_griseus_crigri
ENSGACG00000012961	tufm	94	79.878	ENSCGRG00000001868	-	93	77.435	Cricetulus_griseus_crigri
ENSGACG00000012961	tufm	100	85.874	ENSCSEG00000013841	tufm	100	85.874	Cynoglossus_semilaevis
ENSGACG00000012961	tufm	100	92.377	ENSCVAG00000006251	tufm	100	92.377	Cyprinodon_variegatus
ENSGACG00000012961	tufm	100	83.632	ENSDARG00000104173	tufm	99	83.632	Danio_rerio
ENSGACG00000012961	tufm	97	76.991	ENSDNOG00000047636	TUFM	92	77.033	Dasypus_novemcinctus
ENSGACG00000012961	tufm	89	69.677	ENSDORG00000023544	-	89	68.633	Dipodomys_ordii
ENSGACG00000012961	tufm	92	72.050	FBgn0024556	mEFTu1	81	70.750	Drosophila_melanogaster
ENSGACG00000012961	tufm	94	63.914	ENSETEG00000009601	TUFM	89	65.915	Echinops_telfairi
ENSGACG00000012961	tufm	92	73.913	ENSEBUG00000015907	tufm	66	73.500	Eptatretus_burgeri
ENSGACG00000012961	tufm	95	79.518	ENSEASG00005015477	TUFM	91	78.589	Equus_asinus_asinus
ENSGACG00000012961	tufm	95	79.518	ENSECAG00000019763	TUFM	91	78.589	Equus_caballus
ENSGACG00000012961	tufm	92	78.882	ENSEEUG00000001402	TUFM	89	78.873	Erinaceus_europaeus
ENSGACG00000012961	tufm	100	87.500	ENSELUG00000013410	tufm	96	87.500	Esox_lucius
ENSGACG00000012961	tufm	94	80.488	ENSFCAG00000003103	TUFM	60	78.385	Felis_catus
ENSGACG00000012961	tufm	89	73.869	ENSFDAG00000010881	TUFM	99	74.921	Fukomys_damarensis
ENSGACG00000012961	tufm	99	79.769	ENSFHEG00000020646	tufm	93	83.971	Fundulus_heteroclitus
ENSGACG00000012961	tufm	100	86.323	ENSGMOG00000014616	tufm	100	86.323	Gadus_morhua
ENSGACG00000012961	tufm	100	91.480	ENSGAFG00000004682	tufm	100	91.480	Gambusia_affinis
ENSGACG00000012961	tufm	99	79.827	ENSGAGG00000006132	TUFM	99	82.338	Gopherus_agassizii
ENSGACG00000012961	tufm	92	81.056	ENSGGOG00000014136	TUFM	93	77.962	Gorilla_gorilla
ENSGACG00000012961	tufm	100	91.928	ENSHBUG00000019031	tufm	93	91.928	Haplochromis_burtoni
ENSGACG00000012961	tufm	94	78.287	ENSHGLG00000006613	TUFM	92	77.218	Heterocephalus_glaber_female
ENSGACG00000012961	tufm	94	73.700	ENSHGLG00100004096	TUFM	92	73.381	Heterocephalus_glaber_male
ENSGACG00000012961	tufm	99	90.315	ENSHCOG00000014418	tufm	99	90.315	Hippocampus_comes
ENSGACG00000012961	tufm	100	86.099	ENSIPUG00000022457	tufm	100	86.099	Ictalurus_punctatus
ENSGACG00000012961	tufm	95	45.183	ENSIPUG00000020682	-	91	53.459	Ictalurus_punctatus
ENSGACG00000012961	tufm	99	74.945	ENSSTOG00000011837	TUFM	93	77.672	Ictidomys_tridecemlineatus
ENSGACG00000012961	tufm	94	80.122	ENSJJAG00000011840	Tufm	93	77.910	Jaculus_jaculus
ENSGACG00000012961	tufm	100	88.341	ENSKMAG00000009794	tufm	100	88.341	Kryptolebias_marmoratus
ENSGACG00000012961	tufm	100	90.562	ENSLBEG00000023735	tufm	100	90.562	Labrus_bergylta
ENSGACG00000012961	tufm	96	81.602	ENSLACG00000008242	TUFM	91	82.850	Latimeria_chalumnae
ENSGACG00000012961	tufm	99	72.422	ENSLAFG00000028911	TUFM	93	74.822	Loxodonta_africana
ENSGACG00000012961	tufm	100	75.000	ENSMFAG00000033739	TUFM	93	77.725	Macaca_fascicularis
ENSGACG00000012961	tufm	100	75.000	ENSMMUG00000003303	TUFM	93	77.725	Macaca_mulatta
ENSGACG00000012961	tufm	100	75.000	ENSMNEG00000006031	TUFM	93	77.725	Macaca_nemestrina
ENSGACG00000012961	tufm	94	80.183	ENSMLEG00000042133	TUFM	93	77.672	Mandrillus_leucophaeus
ENSGACG00000012961	tufm	100	89.686	ENSMAMG00000002053	tufm	100	89.686	Mastacembelus_armatus
ENSGACG00000012961	tufm	100	91.704	ENSMZEG00005010857	tufm	93	91.704	Maylandia_zebra
ENSGACG00000012961	tufm	99	74.945	ENSMAUG00000010490	Tufm	93	77.672	Mesocricetus_auratus
ENSGACG00000012961	tufm	94	78.963	ENSMICG00000007650	TUFM	93	76.722	Microcebus_murinus
ENSGACG00000012961	tufm	99	75.388	ENSMOCG00000010051	Tufm	93	77.910	Microtus_ochrogaster
ENSGACG00000012961	tufm	95	90.663	ENSMMOG00000012344	tufm	93	89.474	Mola_mola
ENSGACG00000012961	tufm	94	80.488	ENSMODG00000015564	TUFM	92	78.897	Monodelphis_domestica
ENSGACG00000012961	tufm	100	89.213	ENSMALG00000020254	tufm	100	89.213	Monopterus_albus
ENSGACG00000012961	tufm	99	75.388	MGP_CAROLIEiJ_G0030449	-	93	78.147	Mus_caroli
ENSGACG00000012961	tufm	99	75.388	MGP_CAROLIEiJ_G0030448	-	98	79.825	Mus_caroli
ENSGACG00000012961	tufm	99	75.388	ENSMUSG00000073838	Tufm	98	79.825	Mus_musculus
ENSGACG00000012961	tufm	99	75.610	MGP_PahariEiJ_G0013659	-	93	78.385	Mus_pahari
ENSGACG00000012961	tufm	99	75.610	MGP_PahariEiJ_G0013658	-	98	79.825	Mus_pahari
ENSGACG00000012961	tufm	99	75.610	MGP_SPRETEiJ_G0031562	-	98	80.702	Mus_spretus
ENSGACG00000012961	tufm	99	69.877	MGP_SPRETEiJ_G0031563	-	94	72.052	Mus_spretus
ENSGACG00000012961	tufm	79	81.455	ENSMPUG00000012816	TUFM	98	78.919	Mustela_putorius_furo
ENSGACG00000012961	tufm	97	77.876	ENSMLUG00000012335	-	92	77.698	Myotis_lucifugus
ENSGACG00000012961	tufm	99	75.166	ENSNGAG00000008610	Tufm	93	77.910	Nannospalax_galili
ENSGACG00000012961	tufm	82	90.959	ENSNBRG00000006466	tufm	96	91.436	Neolamprologus_brichardi
ENSGACG00000012961	tufm	94	77.273	ENSNLEG00000011063	TUFM	92	73.286	Nomascus_leucogenys
ENSGACG00000012961	tufm	93	80.061	ENSMEUG00000011131	TUFM	100	79.827	Notamacropus_eugenii
ENSGACG00000012961	tufm	99	64.732	ENSOPRG00000002318	-	91	67.386	Ochotona_princeps
ENSGACG00000012961	tufm	100	92.152	ENSONIG00000019389	tufm	100	92.152	Oreochromis_niloticus
ENSGACG00000012961	tufm	93	81.846	ENSOANG00000013114	TUFM	95	79.759	Ornithorhynchus_anatinus
ENSGACG00000012961	tufm	94	80.793	ENSOCUG00000002683	TUFM	92	78.571	Oryctolagus_cuniculus
ENSGACG00000012961	tufm	100	91.928	ENSORLG00000011497	tufm	100	91.928	Oryzias_latipes
ENSGACG00000012961	tufm	100	91.928	ENSORLG00020013437	tufm	100	91.928	Oryzias_latipes_hni
ENSGACG00000012961	tufm	100	91.704	ENSORLG00015003107	tufm	100	91.704	Oryzias_latipes_hsok
ENSGACG00000012961	tufm	100	92.825	ENSOMEG00000016958	tufm	100	92.825	Oryzias_melastigma
ENSGACG00000012961	tufm	95	79.091	ENSOGAG00000006875	TUFM	93	76.960	Otolemur_garnettii
ENSGACG00000012961	tufm	90	81.789	ENSOARG00000002357	TUFM	97	79.353	Ovis_aries
ENSGACG00000012961	tufm	92	81.056	ENSPPAG00000035168	TUFM	93	77.962	Pan_paniscus
ENSGACG00000012961	tufm	94	80.488	ENSPPRG00000014248	TUFM	93	78.385	Panthera_pardus
ENSGACG00000012961	tufm	96	78.806	ENSPTIG00000009980	TUFM	98	78.657	Panthera_tigris_altaica
ENSGACG00000012961	tufm	92	81.056	ENSPTRG00000007939	TUFM	93	77.962	Pan_troglodytes
ENSGACG00000012961	tufm	100	74.779	ENSPANG00000019624	TUFM	93	77.488	Papio_anubis
ENSGACG00000012961	tufm	100	84.598	ENSPKIG00000023809	tufm	98	82.812	Paramormyrops_kingsleyae
ENSGACG00000012961	tufm	71	78.095	ENSPSIG00000005302	TUFM	100	78.095	Pelodiscus_sinensis
ENSGACG00000012961	tufm	95	88.822	ENSPMGG00000015631	tufm	99	88.038	Periophthalmus_magnuspinnatus
ENSGACG00000012961	tufm	99	75.388	ENSPEMG00000012208	Tufm	93	77.910	Peromyscus_maniculatus_bairdii
ENSGACG00000012961	tufm	94	79.878	ENSPCIG00000025208	TUFM	91	78.177	Phascolarctos_cinereus
ENSGACG00000012961	tufm	100	89.462	ENSPFOG00000007043	tufm	100	89.462	Poecilia_formosa
ENSGACG00000012961	tufm	96	90.120	ENSPLAG00000014372	tufm	94	89.474	Poecilia_latipinna
ENSGACG00000012961	tufm	100	87.277	ENSPMEG00000014520	-	100	87.220	Poecilia_mexicana
ENSGACG00000012961	tufm	100	89.686	ENSPMEG00000019508	tufm	100	89.686	Poecilia_mexicana
ENSGACG00000012961	tufm	100	90.135	ENSPREG00000013913	tufm	100	90.135	Poecilia_reticulata
ENSGACG00000012961	tufm	94	79.573	ENSPPYG00000007226	TUFM	93	76.722	Pongo_abelii
ENSGACG00000012961	tufm	97	70.882	ENSPCAG00000015294	TUFM	93	72.038	Procavia_capensis
ENSGACG00000012961	tufm	94	78.963	ENSPCOG00000012267	TUFM	92	76.905	Propithecus_coquereli
ENSGACG00000012961	tufm	99	91.667	ENSPNYG00000008905	tufm	100	91.667	Pundamilia_nyererei
ENSGACG00000012961	tufm	100	88.565	ENSPNAG00000018881	tufm	100	88.565	Pygocentrus_nattereri
ENSGACG00000012961	tufm	99	75.610	ENSRNOG00000018604	Tufm	93	78.385	Rattus_norvegicus
ENSGACG00000012961	tufm	94	79.878	ENSRBIG00000042008	-	93	74.347	Rhinopithecus_bieti
ENSGACG00000012961	tufm	65	76.991	ENSRBIG00000036713	-	93	78.261	Rhinopithecus_bieti
ENSGACG00000012961	tufm	100	75.166	ENSRROG00000036858	-	93	77.725	Rhinopithecus_roxellana
ENSGACG00000012961	tufm	77	77.695	ENSRROG00000044977	-	74	76.923	Rhinopithecus_roxellana
ENSGACG00000012961	tufm	92	66.564	YOR187W	TUF1	93	61.520	Saccharomyces_cerevisiae
ENSGACG00000012961	tufm	97	75.516	ENSSBOG00000026542	TUFM	93	75.238	Saimiri_boliviensis_boliviensis
ENSGACG00000012961	tufm	98	77.064	ENSSHAG00000012121	TUFM	97	79.187	Sarcophilus_harrisii
ENSGACG00000012961	tufm	100	83.705	ENSSFOG00015013352	tufm	100	82.589	Scleropages_formosus
ENSGACG00000012961	tufm	100	90.359	ENSSMAG00000010053	tufm	100	90.359	Scophthalmus_maximus
ENSGACG00000012961	tufm	100	91.480	ENSSDUG00000016896	tufm	100	91.480	Seriola_dumerili
ENSGACG00000012961	tufm	100	91.256	ENSSLDG00000006494	tufm	100	91.256	Seriola_lalandi_dorsalis
ENSGACG00000012961	tufm	94	79.268	ENSSARG00000011228	TUFM	95	79.224	Sorex_araneus
ENSGACG00000012961	tufm	97	69.912	ENSSPUG00000016312	TUFM	96	71.770	Sphenodon_punctatus
ENSGACG00000012961	tufm	100	89.462	ENSSPAG00000009936	tufm	99	89.686	Stegastes_partitus
ENSGACG00000012961	tufm	94	80.183	ENSSSCG00000007803	TUFM	93	77.672	Sus_scrofa
ENSGACG00000012961	tufm	100	89.462	ENSTRUG00000008300	tufm	100	89.462	Takifugu_rubripes
ENSGACG00000012961	tufm	94	76.220	ENSTBEG00000015029	TUFM	91	76.499	Tupaia_belangeri
ENSGACG00000012961	tufm	65	77.974	ENSTTRG00000005930	-	57	78.599	Tursiops_truncatus
ENSGACG00000012961	tufm	79	79.636	ENSTTRG00000001980	-	100	79.636	Tursiops_truncatus
ENSGACG00000012961	tufm	100	74.779	ENSUAMG00000001471	TUFM	93	77.251	Ursus_americanus
ENSGACG00000012961	tufm	91	81.646	ENSUMAG00000009341	TUFM	99	79.557	Ursus_maritimus
ENSGACG00000012961	tufm	79	79.636	ENSVPAG00000009541	TUFM	100	79.636	Vicugna_pacos
ENSGACG00000012961	tufm	99	75.831	ENSVVUG00000024170	TUFM	93	78.385	Vulpes_vulpes
ENSGACG00000012961	tufm	84	52.895	ENSXETG00000028019	-	78	91.489	Xenopus_tropicalis
ENSGACG00000012961	tufm	99	88.986	ENSXMAG00000011848	tufm	96	91.148	Xiphophorus_maculatus