EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013134 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3446 bases
Position: chrgroupXI:12741840-12745285
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017368	MMR_HSR1	PF01926.23	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017402	-	1354	-	ENSGACP00000017368	404 (aa)	-	G3PIE0

Gene Model

Click here to download ENSGACG00000013134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013134	si:ch211-11k18.4	64	74.231	ENSGACG00000009399	si:dkey-98f17.5	100	74.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013134	si:ch211-11k18.4	99	61.443	ENSAPOG00000010378	si:dkey-98f17.5	83	67.222	Acanthochromis_polyacanthus
ENSGACG00000013134	si:ch211-11k18.4	100	89.356	ENSAPOG00000018833	si:ch211-11k18.4	90	89.356	Acanthochromis_polyacanthus
ENSGACG00000013134	si:ch211-11k18.4	99	86.139	ENSACIG00000006696	si:ch211-11k18.4	90	86.139	Amphilophus_citrinellus
ENSGACG00000013134	si:ch211-11k18.4	99	61.596	ENSACIG00000017719	si:dkey-98f17.5	85	63.613	Amphilophus_citrinellus
ENSGACG00000013134	si:ch211-11k18.4	100	89.851	ENSAOCG00000014284	si:ch211-11k18.4	90	89.851	Amphiprion_ocellaris
ENSGACG00000013134	si:ch211-11k18.4	99	61.692	ENSAOCG00000008661	si:dkey-98f17.5	80	67.500	Amphiprion_ocellaris
ENSGACG00000013134	si:ch211-11k18.4	99	61.692	ENSAPEG00000022447	si:dkey-98f17.5	80	67.500	Amphiprion_percula
ENSGACG00000013134	si:ch211-11k18.4	100	89.604	ENSAPEG00000014910	si:ch211-11k18.4	90	89.604	Amphiprion_percula
ENSGACG00000013134	si:ch211-11k18.4	100	89.109	ENSATEG00000004775	si:ch211-11k18.4	90	89.109	Anabas_testudineus
ENSGACG00000013134	si:ch211-11k18.4	99	61.500	ENSATEG00000007188	si:dkey-98f17.5	85	63.351	Anabas_testudineus
ENSGACG00000013134	si:ch211-11k18.4	93	66.138	ENSACAG00000028632	-	88	64.500	Anolis_carolinensis
ENSGACG00000013134	si:ch211-11k18.4	99	61.940	ENSACLG00000001308	si:dkey-98f17.5	85	63.874	Astatotilapia_calliptera
ENSGACG00000013134	si:ch211-11k18.4	100	90.594	ENSACLG00000007907	si:ch211-11k18.4	90	90.594	Astatotilapia_calliptera
ENSGACG00000013134	si:ch211-11k18.4	100	82.921	ENSAMXG00000017817	si:ch211-11k18.4	90	82.921	Astyanax_mexicanus
ENSGACG00000013134	si:ch211-11k18.4	100	61.386	ENSAMXG00000001190	si:dkey-98f17.5	80	67.778	Astyanax_mexicanus
ENSGACG00000013134	si:ch211-11k18.4	93	61.804	ENSCING00000020807	-	99	61.804	Ciona_intestinalis
ENSGACG00000013134	si:ch211-11k18.4	91	63.686	ENSCSAVG00000009987	-	82	63.686	Ciona_savignyi
ENSGACG00000013134	si:ch211-11k18.4	100	83.168	ENSCSEG00000017661	si:ch211-11k18.4	89	83.168	Cynoglossus_semilaevis
ENSGACG00000013134	si:ch211-11k18.4	99	61.596	ENSCSEG00000017512	si:dkey-98f17.5	79	65.789	Cynoglossus_semilaevis
ENSGACG00000013134	si:ch211-11k18.4	100	88.861	ENSCVAG00000015346	si:ch211-11k18.4	90	88.861	Cyprinodon_variegatus
ENSGACG00000013134	si:ch211-11k18.4	99	61.940	ENSCVAG00000011351	si:dkey-98f17.5	85	64.230	Cyprinodon_variegatus
ENSGACG00000013134	si:ch211-11k18.4	100	61.330	ENSDARG00000068863	si:dkey-98f17.5	84	65.147	Danio_rerio
ENSGACG00000013134	si:ch211-11k18.4	100	83.168	ENSDARG00000087869	si:ch211-11k18.4	100	89.796	Danio_rerio
ENSGACG00000013134	si:ch211-11k18.4	91	57.453	ENSEBUG00000007620	si:dkey-98f17.5	99	57.453	Eptatretus_burgeri
ENSGACG00000013134	si:ch211-11k18.4	100	61.728	ENSELUG00000003365	si:dkey-98f17.5	91	65.497	Esox_lucius
ENSGACG00000013134	si:ch211-11k18.4	99	61.443	ENSFHEG00000012744	si:dkey-98f17.5	85	63.446	Fundulus_heteroclitus
ENSGACG00000013134	si:ch211-11k18.4	100	86.881	ENSFHEG00000019820	si:ch211-11k18.4	90	86.881	Fundulus_heteroclitus
ENSGACG00000013134	si:ch211-11k18.4	100	78.960	ENSGMOG00000003492	si:ch211-11k18.4	100	78.960	Gadus_morhua
ENSGACG00000013134	si:ch211-11k18.4	99	61.097	ENSGAFG00000012362	si:dkey-98f17.5	76	63.089	Gambusia_affinis
ENSGACG00000013134	si:ch211-11k18.4	100	86.139	ENSGAFG00000005677	si:ch211-11k18.4	90	86.139	Gambusia_affinis
ENSGACG00000013134	si:ch211-11k18.4	100	90.594	ENSHBUG00000020638	si:ch211-11k18.4	90	90.594	Haplochromis_burtoni
ENSGACG00000013134	si:ch211-11k18.4	99	62.095	ENSHBUG00000008331	si:dkey-98f17.5	85	64.136	Haplochromis_burtoni
ENSGACG00000013134	si:ch211-11k18.4	98	60.957	ENSHCOG00000016505	si:dkey-98f17.5	85	63.061	Hippocampus_comes
ENSGACG00000013134	si:ch211-11k18.4	100	86.881	ENSHCOG00000014773	si:ch211-11k18.4	90	86.881	Hippocampus_comes
ENSGACG00000013134	si:ch211-11k18.4	92	63.514	ENSIPUG00000019981	si:dkey-98f17.5	82	63.514	Ictalurus_punctatus
ENSGACG00000013134	si:ch211-11k18.4	100	68.812	ENSIPUG00000016694	si:ch211-11k18.4	84	70.681	Ictalurus_punctatus
ENSGACG00000013134	si:ch211-11k18.4	91	84.699	ENSIPUG00000016678	si:ch211-11k18.4	90	84.699	Ictalurus_punctatus
ENSGACG00000013134	si:ch211-11k18.4	99	60.599	ENSKMAG00000014997	si:dkey-98f17.5	81	65.205	Kryptolebias_marmoratus
ENSGACG00000013134	si:ch211-11k18.4	100	87.376	ENSKMAG00000009327	si:ch211-11k18.4	90	87.376	Kryptolebias_marmoratus
ENSGACG00000013134	si:ch211-11k18.4	99	61.347	ENSLBEG00000012756	si:dkey-98f17.5	85	63.351	Labrus_bergylta
ENSGACG00000013134	si:ch211-11k18.4	99	60.401	ENSLACG00000017433	si:dkey-98f17.5	83	62.434	Latimeria_chalumnae
ENSGACG00000013134	si:ch211-11k18.4	99	64.750	ENSLACG00000004899	-	85	66.406	Latimeria_chalumnae
ENSGACG00000013134	si:ch211-11k18.4	94	72.775	ENSLACG00000006280	si:ch211-11k18.4	90	71.921	Latimeria_chalumnae
ENSGACG00000013134	si:ch211-11k18.4	99	62.035	ENSLOCG00000003824	si:dkey-98f17.5	85	64.062	Lepisosteus_oculatus
ENSGACG00000013134	si:ch211-11k18.4	100	90.594	ENSMAMG00000002536	si:ch211-11k18.4	93	90.594	Mastacembelus_armatus
ENSGACG00000013134	si:ch211-11k18.4	99	62.095	ENSMAMG00000014528	si:dkey-98f17.5	85	64.136	Mastacembelus_armatus
ENSGACG00000013134	si:ch211-11k18.4	99	62.189	ENSMZEG00005016572	si:dkey-98f17.5	85	64.136	Maylandia_zebra
ENSGACG00000013134	si:ch211-11k18.4	100	90.347	ENSMZEG00005008941	si:ch211-11k18.4	90	90.347	Maylandia_zebra
ENSGACG00000013134	si:ch211-11k18.4	100	81.683	ENSMMOG00000012485	si:ch211-11k18.4	89	81.683	Mola_mola
ENSGACG00000013134	si:ch211-11k18.4	100	86.386	ENSMALG00000019735	si:ch211-11k18.4	90	86.386	Monopterus_albus
ENSGACG00000013134	si:ch211-11k18.4	99	61.596	ENSMALG00000012761	si:dkey-98f17.5	82	67.222	Monopterus_albus
ENSGACG00000013134	si:ch211-11k18.4	100	89.851	ENSNBRG00000002220	si:ch211-11k18.4	92	89.851	Neolamprologus_brichardi
ENSGACG00000013134	si:ch211-11k18.4	99	62.189	ENSNBRG00000006068	si:dkey-98f17.5	85	64.136	Neolamprologus_brichardi
ENSGACG00000013134	si:ch211-11k18.4	99	62.438	ENSONIG00000013568	si:dkey-98f17.5	85	64.491	Oreochromis_niloticus
ENSGACG00000013134	si:ch211-11k18.4	100	90.099	ENSONIG00000019412	si:ch211-11k18.4	90	90.099	Oreochromis_niloticus
ENSGACG00000013134	si:ch211-11k18.4	89	62.881	ENSORLG00000007958	si:dkey-98f17.5	79	65.205	Oryzias_latipes
ENSGACG00000013134	si:ch211-11k18.4	100	85.149	ENSORLG00000012015	si:ch211-11k18.4	90	85.149	Oryzias_latipes
ENSGACG00000013134	si:ch211-11k18.4	100	84.653	ENSORLG00020012386	si:ch211-11k18.4	90	84.653	Oryzias_latipes_hni
ENSGACG00000013134	si:ch211-11k18.4	99	60.848	ENSORLG00020013350	si:dkey-98f17.5	85	62.827	Oryzias_latipes_hni
ENSGACG00000013134	si:ch211-11k18.4	100	85.891	ENSORLG00015022862	si:ch211-11k18.4	90	85.891	Oryzias_latipes_hsok
ENSGACG00000013134	si:ch211-11k18.4	99	60.945	ENSORLG00015002000	si:dkey-98f17.5	85	62.924	Oryzias_latipes_hsok
ENSGACG00000013134	si:ch211-11k18.4	100	62.069	ENSOMEG00000003154	si:dkey-98f17.5	85	65.946	Oryzias_melastigma
ENSGACG00000013134	si:ch211-11k18.4	100	86.386	ENSOMEG00000018686	si:ch211-11k18.4	90	86.386	Oryzias_melastigma
ENSGACG00000013134	si:ch211-11k18.4	93	83.511	ENSPKIG00000018807	si:ch211-11k18.4	90	81.436	Paramormyrops_kingsleyae
ENSGACG00000013134	si:ch211-11k18.4	100	62.469	ENSPKIG00000024621	si:dkey-98f17.5	85	64.491	Paramormyrops_kingsleyae
ENSGACG00000013134	si:ch211-11k18.4	100	76.980	ENSPKIG00000023918	-	88	76.980	Paramormyrops_kingsleyae
ENSGACG00000013134	si:ch211-11k18.4	100	88.366	ENSPMGG00000016507	si:ch211-11k18.4	90	88.366	Periophthalmus_magnuspinnatus
ENSGACG00000013134	si:ch211-11k18.4	92	65.768	ENSPMGG00000019065	si:dkey-98f17.5	82	65.768	Periophthalmus_magnuspinnatus
ENSGACG00000013134	si:ch211-11k18.4	100	87.376	ENSPFOG00000007976	si:ch211-11k18.4	90	87.376	Poecilia_formosa
ENSGACG00000013134	si:ch211-11k18.4	99	61.481	ENSPFOG00000015142	si:dkey-98f17.5	85	63.472	Poecilia_formosa
ENSGACG00000013134	si:ch211-11k18.4	99	61.940	ENSPLAG00000003709	si:dkey-98f17.5	85	63.969	Poecilia_latipinna
ENSGACG00000013134	si:ch211-11k18.4	100	87.376	ENSPLAG00000019794	si:ch211-11k18.4	90	87.376	Poecilia_latipinna
ENSGACG00000013134	si:ch211-11k18.4	99	61.845	ENSPMEG00000018709	si:dkey-98f17.5	80	63.874	Poecilia_mexicana
ENSGACG00000013134	si:ch211-11k18.4	100	87.129	ENSPMEG00000024198	si:ch211-11k18.4	93	87.129	Poecilia_mexicana
ENSGACG00000013134	si:ch211-11k18.4	99	86.284	ENSPREG00000015319	si:ch211-11k18.4	92	86.284	Poecilia_reticulata
ENSGACG00000013134	si:ch211-11k18.4	100	61.728	ENSPREG00000000708	si:dkey-98f17.5	86	65.591	Poecilia_reticulata
ENSGACG00000013134	si:ch211-11k18.4	100	90.842	ENSPNYG00000017099	si:ch211-11k18.4	90	90.842	Pundamilia_nyererei
ENSGACG00000013134	si:ch211-11k18.4	99	62.095	ENSPNYG00000017266	si:dkey-98f17.5	85	64.136	Pundamilia_nyererei
ENSGACG00000013134	si:ch211-11k18.4	100	83.168	ENSPNAG00000022138	si:ch211-11k18.4	90	83.168	Pygocentrus_nattereri
ENSGACG00000013134	si:ch211-11k18.4	99	62.035	ENSPNAG00000021352	si:dkey-98f17.5	82	66.486	Pygocentrus_nattereri
ENSGACG00000013134	si:ch211-11k18.4	100	77.228	ENSSFOG00015000985	si:ch211-11k18.4	85	77.228	Scleropages_formosus
ENSGACG00000013134	si:ch211-11k18.4	100	59.804	ENSSFOG00015017965	si:dkey-98f17.5	85	61.358	Scleropages_formosus
ENSGACG00000013134	si:ch211-11k18.4	100	88.119	ENSSMAG00000009651	si:ch211-11k18.4	90	88.119	Scophthalmus_maximus
ENSGACG00000013134	si:ch211-11k18.4	99	61.097	ENSSMAG00000011905	si:dkey-98f17.5	86	63.089	Scophthalmus_maximus
ENSGACG00000013134	si:ch211-11k18.4	98	61.461	ENSSDUG00000013457	si:dkey-98f17.5	84	63.395	Seriola_dumerili
ENSGACG00000013134	si:ch211-11k18.4	100	89.604	ENSSDUG00000016411	si:ch211-11k18.4	90	89.604	Seriola_dumerili
ENSGACG00000013134	si:ch211-11k18.4	98	61.209	ENSSLDG00000025395	si:dkey-98f17.5	80	65.833	Seriola_lalandi_dorsalis
ENSGACG00000013134	si:ch211-11k18.4	100	89.356	ENSSLDG00000019145	si:ch211-11k18.4	90	89.356	Seriola_lalandi_dorsalis
ENSGACG00000013134	si:ch211-11k18.4	80	69.632	ENSSPUG00000010096	-	88	66.762	Sphenodon_punctatus
ENSGACG00000013134	si:ch211-11k18.4	100	88.614	ENSSPAG00000010697	si:ch211-11k18.4	90	88.614	Stegastes_partitus
ENSGACG00000013134	si:ch211-11k18.4	99	61.692	ENSSPAG00000018800	si:dkey-98f17.5	81	66.667	Stegastes_partitus
ENSGACG00000013134	si:ch211-11k18.4	100	88.119	ENSTRUG00000020291	si:ch211-11k18.4	90	88.119	Takifugu_rubripes
ENSGACG00000013134	si:ch211-11k18.4	99	61.443	ENSTRUG00000021287	si:dkey-98f17.5	80	67.867	Takifugu_rubripes
ENSGACG00000013134	si:ch211-11k18.4	100	67.813	ENSXETG00000031783	-	82	72.507	Xenopus_tropicalis
ENSGACG00000013134	si:ch211-11k18.4	99	61.194	ENSXCOG00000017002	si:dkey-98f17.5	79	67.416	Xiphophorus_couchianus
ENSGACG00000013134	si:ch211-11k18.4	98	83.249	ENSXCOG00000018094	si:ch211-11k18.4	84	86.327	Xiphophorus_couchianus
ENSGACG00000013134	si:ch211-11k18.4	99	60.848	ENSXMAG00000007688	si:dkey-98f17.5	77	65.676	Xiphophorus_maculatus
ENSGACG00000013134	si:ch211-11k18.4	100	87.624	ENSXMAG00000021235	si:ch211-11k18.4	90	87.624	Xiphophorus_maculatus