EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013190 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 12851 bases
Position: chrgroupVIII:17135817-17148667
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017454	ResIII	PF04851.15	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017488	-	3627	-	ENSGACP00000017454	1209 (aa)	-	G3PIM6

Gene Model

Click here to download ENSGACG00000013190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013190	si:ch73-63e15.2	78	63.946	ENSGACG00000015633	sbno1	77	60.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013190	si:ch73-63e15.2	94	69.686	ENSG00000064932	SBNO2	87	69.251	Homo_sapiens
ENSGACG00000013190	si:ch73-63e15.2	95	92.087	ENSAPOG00000003185	si:ch73-63e15.2	87	88.425	Acanthochromis_polyacanthus
ENSGACG00000013190	si:ch73-63e15.2	95	92.522	ENSAOCG00000016581	si:ch73-63e15.2	93	88.377	Amphiprion_ocellaris
ENSGACG00000013190	si:ch73-63e15.2	95	92.435	ENSAPEG00000008862	si:ch73-63e15.2	76	92.435	Amphiprion_percula
ENSGACG00000013190	si:ch73-63e15.2	95	91.304	ENSATEG00000023838	si:ch73-63e15.2	93	87.644	Anabas_testudineus
ENSGACG00000013190	si:ch73-63e15.2	95	72.213	ENSAPLG00000007158	SBNO2	90	72.127	Anas_platyrhynchos
ENSGACG00000013190	si:ch73-63e15.2	94	68.902	ENSANAG00000026685	SBNO2	88	68.467	Aotus_nancymaae
ENSGACG00000013190	si:ch73-63e15.2	96	86.781	ENSACLG00000005090	si:ch73-63e15.2	72	87.391	Astatotilapia_calliptera
ENSGACG00000013190	si:ch73-63e15.2	95	80.260	ENSAMXG00000015881	si:ch73-63e15.2	82	80.331	Astyanax_mexicanus
ENSGACG00000013190	si:ch73-63e15.2	96	79.587	ENSAMXG00000018868	sbno2a	95	79.814	Astyanax_mexicanus
ENSGACG00000013190	si:ch73-63e15.2	94	70.122	ENSBTAG00000020780	SBNO2	87	69.948	Bos_taurus
ENSGACG00000013190	si:ch73-63e15.2	94	70.357	ENSCAFG00000019543	SBNO2	88	67.541	Canis_familiaris
ENSGACG00000013190	si:ch73-63e15.2	94	70.357	ENSCAFG00020017115	SBNO2	88	70.096	Canis_lupus_dingo
ENSGACG00000013190	si:ch73-63e15.2	94	69.948	ENSCHIG00000026127	SBNO2	85	69.774	Capra_hircus
ENSGACG00000013190	si:ch73-63e15.2	93	68.049	ENSCAPG00000005731	SBNO2	93	67.696	Cavia_aperea
ENSGACG00000013190	si:ch73-63e15.2	94	68.011	ENSCPOG00000007477	SBNO2	86	67.273	Cavia_porcellus
ENSGACG00000013190	si:ch73-63e15.2	94	68.815	ENSCCAG00000037518	SBNO2	88	68.554	Cebus_capucinus
ENSGACG00000013190	si:ch73-63e15.2	94	69.861	ENSCATG00000037046	SBNO2	87	69.251	Cercocebus_atys
ENSGACG00000013190	si:ch73-63e15.2	95	68.870	ENSCLAG00000010178	SBNO2	99	69.231	Chinchilla_lanigera
ENSGACG00000013190	si:ch73-63e15.2	94	69.774	ENSCSAG00000012317	SBNO2	83	69.164	Chlorocebus_sabaeus
ENSGACG00000013190	si:ch73-63e15.2	97	70.135	ENSCPBG00000008920	SBNO2	89	73.747	Chrysemys_picta_bellii
ENSGACG00000013190	si:ch73-63e15.2	90	69.672	ENSCANG00000036745	SBNO2	95	69.308	Colobus_angolensis_palliatus
ENSGACG00000013190	si:ch73-63e15.2	95	67.558	ENSCGRG00001023960	Sbno2	85	67.213	Cricetulus_griseus_chok1gshd
ENSGACG00000013190	si:ch73-63e15.2	95	68.879	ENSCGRG00000011984	Sbno2	85	68.534	Cricetulus_griseus_crigri
ENSGACG00000013190	si:ch73-63e15.2	95	86.075	ENSCSEG00000006856	si:ch73-63e15.2	92	90.255	Cynoglossus_semilaevis
ENSGACG00000013190	si:ch73-63e15.2	95	87.565	ENSCVAG00000005663	si:ch73-63e15.2	76	87.565	Cyprinodon_variegatus
ENSGACG00000013190	si:ch73-63e15.2	95	78.028	ENSDARG00000098801	sbno2a	84	78.806	Danio_rerio
ENSGACG00000013190	si:ch73-63e15.2	95	79.376	ENSDARG00000016188	SBNO2	81	79.634	Danio_rerio
ENSGACG00000013190	si:ch73-63e15.2	94	69.922	ENSDORG00000002916	Sbno2	84	69.110	Dipodomys_ordii
ENSGACG00000013190	si:ch73-63e15.2	94	70.183	ENSEASG00005021621	SBNO2	88	69.922	Equus_asinus_asinus
ENSGACG00000013190	si:ch73-63e15.2	94	69.922	ENSECAG00000011827	SBNO2	88	70.009	Equus_caballus
ENSGACG00000013190	si:ch73-63e15.2	95	86.707	ENSELUG00000020457	si:ch73-63e15.2	78	86.707	Esox_lucius
ENSGACG00000013190	si:ch73-63e15.2	97	71.271	ENSFALG00000013988	SBNO2	84	72.241	Ficedula_albicollis
ENSGACG00000013190	si:ch73-63e15.2	94	66.146	ENSFDAG00000015186	SBNO2	87	66.319	Fukomys_damarensis
ENSGACG00000013190	si:ch73-63e15.2	96	87.144	ENSFHEG00000022262	si:ch73-63e15.2	76	87.803	Fundulus_heteroclitus
ENSGACG00000013190	si:ch73-63e15.2	99	85.738	ENSGMOG00000007542	si:ch73-63e15.2	99	85.491	Gadus_morhua
ENSGACG00000013190	si:ch73-63e15.2	94	73.721	ENSGALG00000037522	SBNO2	84	73.634	Gallus_gallus
ENSGACG00000013190	si:ch73-63e15.2	96	87.910	ENSGAFG00000004860	si:ch73-63e15.2	90	88.052	Gambusia_affinis
ENSGACG00000013190	si:ch73-63e15.2	95	73.689	ENSGAGG00000008348	SBNO2	86	73.603	Gopherus_agassizii
ENSGACG00000013190	si:ch73-63e15.2	96	86.942	ENSHBUG00000010742	si:ch73-63e15.2	76	87.641	Haplochromis_burtoni
ENSGACG00000013190	si:ch73-63e15.2	94	69.466	ENSHGLG00000008739	SBNO2	85	68.712	Heterocephalus_glaber_female
ENSGACG00000013190	si:ch73-63e15.2	94	69.398	ENSHGLG00100005269	SBNO2	99	69.137	Heterocephalus_glaber_male
ENSGACG00000013190	si:ch73-63e15.2	95	87.043	ENSHCOG00000000884	si:ch73-63e15.2	85	87.130	Hippocampus_comes
ENSGACG00000013190	si:ch73-63e15.2	96	81.018	ENSIPUG00000019672	sbno2	92	81.197	Ictalurus_punctatus
ENSGACG00000013190	si:ch73-63e15.2	95	80.522	ENSIPUG00000000537	si:ch73-63e15.2	83	80.522	Ictalurus_punctatus
ENSGACG00000013190	si:ch73-63e15.2	94	70.096	ENSSTOG00000025832	SBNO2	84	69.922	Ictidomys_tridecemlineatus
ENSGACG00000013190	si:ch73-63e15.2	95	65.923	ENSJJAG00000017397	Sbno2	85	66.376	Jaculus_jaculus
ENSGACG00000013190	si:ch73-63e15.2	96	88.322	ENSKMAG00000005541	si:ch73-63e15.2	76	88.599	Kryptolebias_marmoratus
ENSGACG00000013190	si:ch73-63e15.2	54	84.488	ENSLBEG00000005937	-	100	84.187	Labrus_bergylta
ENSGACG00000013190	si:ch73-63e15.2	95	92.235	ENSLBEG00000025016	si:ch73-63e15.2	95	89.958	Labrus_bergylta
ENSGACG00000013190	si:ch73-63e15.2	54	69.848	ENSLACG00000012598	SBNO2	97	73.480	Latimeria_chalumnae
ENSGACG00000013190	si:ch73-63e15.2	100	81.152	ENSLOCG00000004643	si:ch73-63e15.2	84	84.448	Lepisosteus_oculatus
ENSGACG00000013190	si:ch73-63e15.2	93	66.197	ENSLAFG00000008824	SBNO2	89	65.669	Loxodonta_africana
ENSGACG00000013190	si:ch73-63e15.2	94	68.233	ENSMFAG00000040030	SBNO2	89	67.624	Macaca_fascicularis
ENSGACG00000013190	si:ch73-63e15.2	94	69.774	ENSMMUG00000010886	SBNO2	87	67.624	Macaca_mulatta
ENSGACG00000013190	si:ch73-63e15.2	98	68.523	ENSMNEG00000039927	SBNO2	87	69.338	Macaca_nemestrina
ENSGACG00000013190	si:ch73-63e15.2	87	70.321	ENSMLEG00000038556	SBNO2	90	69.943	Mandrillus_leucophaeus
ENSGACG00000013190	si:ch73-63e15.2	95	90.199	ENSMAMG00000018758	si:ch73-63e15.2	75	90.199	Mastacembelus_armatus
ENSGACG00000013190	si:ch73-63e15.2	96	86.856	ENSMZEG00005010682	si:ch73-63e15.2	72	87.554	Maylandia_zebra
ENSGACG00000013190	si:ch73-63e15.2	94	73.293	ENSMGAG00000003801	SBNO2	89	73.374	Meleagris_gallopavo
ENSGACG00000013190	si:ch73-63e15.2	95	69.284	ENSMAUG00000008034	Sbno2	85	69.025	Mesocricetus_auratus
ENSGACG00000013190	si:ch73-63e15.2	99	67.193	ENSMICG00000013071	SBNO2	92	66.944	Microcebus_murinus
ENSGACG00000013190	si:ch73-63e15.2	95	69.138	ENSMOCG00000010504	Sbno2	85	68.879	Microtus_ochrogaster
ENSGACG00000013190	si:ch73-63e15.2	95	71.664	ENSMODG00000005382	SBNO2	81	71.577	Monodelphis_domestica
ENSGACG00000013190	si:ch73-63e15.2	79	81.092	ENSMALG00000021831	si:ch73-63e15.2	96	80.567	Monopterus_albus
ENSGACG00000013190	si:ch73-63e15.2	95	68.534	ENSMUSG00000035673	Sbno2	92	68.788	Mus_musculus
ENSGACG00000013190	si:ch73-63e15.2	95	68.594	MGP_PahariEiJ_G0030976	Sbno2	85	68.248	Mus_pahari
ENSGACG00000013190	si:ch73-63e15.2	95	68.680	MGP_SPRETEiJ_G0016381	Sbno2	91	68.421	Mus_spretus
ENSGACG00000013190	si:ch73-63e15.2	81	72.110	ENSMPUG00000008747	SBNO2	90	72.008	Mustela_putorius_furo
ENSGACG00000013190	si:ch73-63e15.2	95	67.990	ENSNGAG00000004308	Sbno2	87	67.817	Nannospalax_galili
ENSGACG00000013190	si:ch73-63e15.2	92	85.779	ENSNBRG00000022968	si:ch73-63e15.2	95	87.889	Neolamprologus_brichardi
ENSGACG00000013190	si:ch73-63e15.2	87	70.213	ENSNLEG00000001305	SBNO2	86	70.213	Nomascus_leucogenys
ENSGACG00000013190	si:ch73-63e15.2	78	67.513	ENSMEUG00000013511	-	78	67.407	Notamacropus_eugenii
ENSGACG00000013190	si:ch73-63e15.2	94	68.178	ENSOPRG00000017238	SBNO2	94	68.003	Ochotona_princeps
ENSGACG00000013190	si:ch73-63e15.2	94	68.412	ENSODEG00000011822	SBNO2	86	67.672	Octodon_degus
ENSGACG00000013190	si:ch73-63e15.2	96	87.457	ENSONIG00000002490	si:ch73-63e15.2	91	87.630	Oreochromis_niloticus
ENSGACG00000013190	si:ch73-63e15.2	94	87.325	ENSORLG00000000913	si:ch73-63e15.2	77	86.938	Oryzias_latipes
ENSGACG00000013190	si:ch73-63e15.2	94	87.238	ENSORLG00020010978	si:ch73-63e15.2	77	86.851	Oryzias_latipes_hni
ENSGACG00000013190	si:ch73-63e15.2	94	87.052	ENSORLG00015000202	si:ch73-63e15.2	77	86.776	Oryzias_latipes_hsok
ENSGACG00000013190	si:ch73-63e15.2	96	86.593	ENSOMEG00000000359	si:ch73-63e15.2	73	87.295	Oryzias_melastigma
ENSGACG00000013190	si:ch73-63e15.2	94	67.160	ENSOARG00000011130	SBNO2	86	66.986	Ovis_aries
ENSGACG00000013190	si:ch73-63e15.2	94	68.826	ENSPPAG00000032482	SBNO2	89	68.566	Pan_paniscus
ENSGACG00000013190	si:ch73-63e15.2	98	68.270	ENSPTRG00000010185	SBNO2	87	69.251	Pan_troglodytes
ENSGACG00000013190	si:ch73-63e15.2	94	66.376	ENSPANG00000009658	SBNO2	87	65.767	Papio_anubis
ENSGACG00000013190	si:ch73-63e15.2	94	82.777	ENSPKIG00000024201	si:ch73-63e15.2	82	82.578	Paramormyrops_kingsleyae
ENSGACG00000013190	si:ch73-63e15.2	89	75.646	ENSPKIG00000009707	-	83	78.692	Paramormyrops_kingsleyae
ENSGACG00000013190	si:ch73-63e15.2	80	73.882	ENSPSIG00000002852	SBNO2	99	73.679	Pelodiscus_sinensis
ENSGACG00000013190	si:ch73-63e15.2	96	84.370	ENSPMGG00000014375	si:ch73-63e15.2	87	84.028	Periophthalmus_magnuspinnatus
ENSGACG00000013190	si:ch73-63e15.2	95	67.069	ENSPEMG00000024122	Sbno2	85	66.695	Peromyscus_maniculatus_bairdii
ENSGACG00000013190	si:ch73-63e15.2	93	72.124	ENSPCIG00000011264	SBNO2	82	71.664	Phascolarctos_cinereus
ENSGACG00000013190	si:ch73-63e15.2	96	88.342	ENSPFOG00000004096	si:ch73-63e15.2	99	87.358	Poecilia_formosa
ENSGACG00000013190	si:ch73-63e15.2	96	88.256	ENSPLAG00000014653	si:ch73-63e15.2	76	88.619	Poecilia_latipinna
ENSGACG00000013190	si:ch73-63e15.2	96	88.256	ENSPMEG00000002129	si:ch73-63e15.2	90	86.884	Poecilia_mexicana
ENSGACG00000013190	si:ch73-63e15.2	96	88.083	ENSPREG00000006755	si:ch73-63e15.2	72	88.445	Poecilia_reticulata
ENSGACG00000013190	si:ch73-63e15.2	89	68.558	ENSPCAG00000012256	SBNO2	79	68.279	Procavia_capensis
ENSGACG00000013190	si:ch73-63e15.2	95	62.931	ENSPCOG00000015216	SBNO2	91	61.245	Propithecus_coquereli
ENSGACG00000013190	si:ch73-63e15.2	96	86.856	ENSPNYG00000019926	si:ch73-63e15.2	76	87.554	Pundamilia_nyererei
ENSGACG00000013190	si:ch73-63e15.2	95	81.732	ENSPNAG00000020260	si:ch73-63e15.2	82	81.723	Pygocentrus_nattereri
ENSGACG00000013190	si:ch73-63e15.2	95	80.000	ENSPNAG00000026609	sbno2a	85	78.506	Pygocentrus_nattereri
ENSGACG00000013190	si:ch73-63e15.2	95	69.025	ENSRNOG00000013987	Sbno2	89	68.680	Rattus_norvegicus
ENSGACG00000013190	si:ch73-63e15.2	99	62.458	ENSRBIG00000009740	SBNO2	86	67.769	Rhinopithecus_bieti
ENSGACG00000013190	si:ch73-63e15.2	83	72.426	ENSRROG00000044671	SBNO2	85	71.569	Rhinopithecus_roxellana
ENSGACG00000013190	si:ch73-63e15.2	94	69.164	ENSSBOG00000023562	SBNO2	88	68.641	Saimiri_boliviensis_boliviensis
ENSGACG00000013190	si:ch73-63e15.2	93	72.350	ENSSHAG00000010241	SBNO2	97	72.173	Sarcophilus_harrisii
ENSGACG00000013190	si:ch73-63e15.2	95	81.104	ENSSFOG00015005861	si:ch73-63e15.2	92	81.282	Scleropages_formosus
ENSGACG00000013190	si:ch73-63e15.2	95	91.565	ENSSMAG00000012489	si:ch73-63e15.2	73	91.565	Scophthalmus_maximus
ENSGACG00000013190	si:ch73-63e15.2	95	92.254	ENSSDUG00000003527	si:ch73-63e15.2	73	92.254	Seriola_dumerili
ENSGACG00000013190	si:ch73-63e15.2	95	92.254	ENSSLDG00000004623	si:ch73-63e15.2	73	92.254	Seriola_lalandi_dorsalis
ENSGACG00000013190	si:ch73-63e15.2	95	92.696	ENSSPAG00000017717	si:ch73-63e15.2	75	92.696	Stegastes_partitus
ENSGACG00000013190	si:ch73-63e15.2	95	69.370	ENSSSCG00000030042	SBNO2	88	69.660	Sus_scrofa
ENSGACG00000013190	si:ch73-63e15.2	92	87.825	ENSTRUG00000018193	si:ch73-63e15.2	86	87.735	Takifugu_rubripes
ENSGACG00000013190	si:ch73-63e15.2	86	71.238	ENSUAMG00000006568	SBNO2	89	74.403	Ursus_americanus
ENSGACG00000013190	si:ch73-63e15.2	97	68.829	ENSVVUG00000022823	SBNO2	82	70.009	Vulpes_vulpes
ENSGACG00000013190	si:ch73-63e15.2	86	66.516	ENSXETG00000021579	sbno2	98	65.489	Xenopus_tropicalis
ENSGACG00000013190	si:ch73-63e15.2	82	85.939	ENSXCOG00000009209	si:ch73-63e15.2	87	90.794	Xiphophorus_couchianus
ENSGACG00000013190	si:ch73-63e15.2	96	88.256	ENSXMAG00000012091	si:ch73-63e15.2	84	90.458	Xiphophorus_maculatus