EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000013247 (Gene tree)
Gene ID: -
Gene Symbol: polr2eb
Alias: fk97g10|polr2e|wu:fk97g10|zgc:101098
Full Name: polymerase (RNA) II (DNA directed) polypeptide E%2C b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3742 bases
Position: chrgroupVIII:17181394-17185135
Accession: ZDB-GENE-040801-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017528	RNA_pol_Rpb5_N	PF03871.14	2.5e-34	1	1
ENSGACP00000017528	RNA_pol_Rpb5_C	PF01191.19	4.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017562	-	854	-	ENSGACP00000017528	210 (aa)	-	G3PIU9

Gene Model

Click here to download ENSGACG00000013247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013247	polr2eb	100	93.810	ENSG00000099817	POLR2E	100	93.810	Homo_sapiens
ENSGACG00000013247	polr2eb	100	98.571	ENSAPOG00000002935	polr2eb	100	98.571	Acanthochromis_polyacanthus
ENSGACG00000013247	polr2eb	100	94.286	ENSAMEG00000003159	POLR2E	100	94.286	Ailuropoda_melanoleuca
ENSGACG00000013247	polr2eb	100	85.238	ENSACIG00000024371	polr2eb	100	85.238	Amphilophus_citrinellus
ENSGACG00000013247	polr2eb	100	98.571	ENSAOCG00000018166	polr2eb	100	98.571	Amphiprion_ocellaris
ENSGACG00000013247	polr2eb	100	98.571	ENSAPEG00000009000	polr2eb	100	98.571	Amphiprion_percula
ENSGACG00000013247	polr2eb	100	98.571	ENSATEG00000023760	polr2eb	100	98.571	Anabas_testudineus
ENSGACG00000013247	polr2eb	100	94.286	ENSANAG00000038488	POLR2E	100	94.286	Aotus_nancymaae
ENSGACG00000013247	polr2eb	100	98.095	ENSACLG00000005254	polr2eb	100	98.095	Astatotilapia_calliptera
ENSGACG00000013247	polr2eb	100	98.095	ENSAMXG00000018915	POLR2E	100	98.095	Astyanax_mexicanus
ENSGACG00000013247	polr2eb	100	94.286	ENSBTAG00000020776	POLR2E	100	94.286	Bos_taurus
ENSGACG00000013247	polr2eb	99	77.885	WBGene00019246	rpb-5	99	77.885	Caenorhabditis_elegans
ENSGACG00000013247	polr2eb	67	90.000	ENSCJAG00000007666	-	77	90.000	Callithrix_jacchus
ENSGACG00000013247	polr2eb	100	91.429	ENSCAFG00000019546	POLR2E	100	91.429	Canis_familiaris
ENSGACG00000013247	polr2eb	100	94.286	ENSCAFG00020017111	POLR2E	100	94.286	Canis_lupus_dingo
ENSGACG00000013247	polr2eb	100	94.286	ENSCHIG00000014151	POLR2E	100	94.286	Capra_hircus
ENSGACG00000013247	polr2eb	100	79.048	ENSTSYG00000026377	POLR2E	100	79.048	Carlito_syrichta
ENSGACG00000013247	polr2eb	91	93.750	ENSCAPG00000010843	POLR2E	93	93.750	Cavia_aperea
ENSGACG00000013247	polr2eb	100	94.286	ENSCPOG00000001542	POLR2E	100	94.286	Cavia_porcellus
ENSGACG00000013247	polr2eb	100	94.286	ENSCCAG00000025658	POLR2E	100	94.286	Cebus_capucinus
ENSGACG00000013247	polr2eb	100	94.286	ENSCATG00000008926	POLR2E	100	94.286	Cercocebus_atys
ENSGACG00000013247	polr2eb	100	94.286	ENSCLAG00000014874	-	100	94.286	Chinchilla_lanigera
ENSGACG00000013247	polr2eb	98	72.683	ENSCLAG00000009238	-	100	72.683	Chinchilla_lanigera
ENSGACG00000013247	polr2eb	100	94.286	ENSCSAG00000012336	POLR2E	100	94.286	Chlorocebus_sabaeus
ENSGACG00000013247	polr2eb	100	94.762	ENSCPBG00000009702	POLR2E	100	94.762	Chrysemys_picta_bellii
ENSGACG00000013247	polr2eb	100	85.714	ENSCING00000024933	-	99	85.714	Ciona_intestinalis
ENSGACG00000013247	polr2eb	100	94.286	ENSCANG00000025560	POLR2E	100	94.286	Colobus_angolensis_palliatus
ENSGACG00000013247	polr2eb	100	94.286	ENSCGRG00001022927	Polr2e	100	94.286	Cricetulus_griseus_chok1gshd
ENSGACG00000013247	polr2eb	100	88.837	ENSCGRG00000016441	Polr2e	100	88.837	Cricetulus_griseus_crigri
ENSGACG00000013247	polr2eb	100	96.667	ENSCSEG00000007107	polr2eb	92	96.667	Cynoglossus_semilaevis
ENSGACG00000013247	polr2eb	100	98.571	ENSCVAG00000019940	polr2eb	100	98.571	Cyprinodon_variegatus
ENSGACG00000013247	polr2eb	100	97.619	ENSDARG00000026183	polr2eb	100	97.619	Danio_rerio
ENSGACG00000013247	polr2eb	90	93.684	ENSDNOG00000044994	POLR2E	84	93.684	Dasypus_novemcinctus
ENSGACG00000013247	polr2eb	100	94.286	ENSDORG00000001154	Polr2e	100	94.286	Dipodomys_ordii
ENSGACG00000013247	polr2eb	99	85.167	FBgn0033571	Rpb5	99	85.167	Drosophila_melanogaster
ENSGACG00000013247	polr2eb	75	91.083	ENSEBUG00000010159	-	76	91.083	Eptatretus_burgeri
ENSGACG00000013247	polr2eb	69	87.586	ENSEASG00005021615	POLR2E	67	82.099	Equus_asinus_asinus
ENSGACG00000013247	polr2eb	91	92.670	ENSECAG00000011124	POLR2E	100	81.429	Equus_caballus
ENSGACG00000013247	polr2eb	100	96.667	ENSELUG00000020646	polr2e	100	96.667	Esox_lucius
ENSGACG00000013247	polr2eb	100	97.619	ENSELUG00000005815	POLR2E	100	97.619	Esox_lucius
ENSGACG00000013247	polr2eb	100	93.810	ENSFCAG00000007318	POLR2E	100	93.810	Felis_catus
ENSGACG00000013247	polr2eb	91	94.271	ENSFALG00000013986	POLR2E	99	94.271	Ficedula_albicollis
ENSGACG00000013247	polr2eb	100	94.286	ENSFDAG00000014539	POLR2E	100	94.286	Fukomys_damarensis
ENSGACG00000013247	polr2eb	100	98.571	ENSFHEG00000022398	polr2eb	100	98.571	Fundulus_heteroclitus
ENSGACG00000013247	polr2eb	100	98.095	ENSGMOG00000007615	polr2eb	100	98.095	Gadus_morhua
ENSGACG00000013247	polr2eb	100	94.762	ENSGALG00000002591	POLR2E	100	94.762	Gallus_gallus
ENSGACG00000013247	polr2eb	100	98.095	ENSGAFG00000005087	polr2eb	100	98.095	Gambusia_affinis
ENSGACG00000013247	polr2eb	100	94.762	ENSGAGG00000008356	POLR2E	100	94.762	Gopherus_agassizii
ENSGACG00000013247	polr2eb	100	94.286	ENSGGOG00000011267	POLR2E	100	94.286	Gorilla_gorilla
ENSGACG00000013247	polr2eb	68	93.662	ENSHBUG00000011099	polr2eb	100	93.662	Haplochromis_burtoni
ENSGACG00000013247	polr2eb	100	94.286	ENSHGLG00000013330	POLR2E	100	94.286	Heterocephalus_glaber_female
ENSGACG00000013247	polr2eb	100	94.286	ENSHGLG00100011014	POLR2E	100	94.286	Heterocephalus_glaber_male
ENSGACG00000013247	polr2eb	53	95.536	ENSHCOG00000012099	-	88	95.536	Hippocampus_comes
ENSGACG00000013247	polr2eb	100	97.143	ENSHCOG00000000906	polr2eb	100	97.143	Hippocampus_comes
ENSGACG00000013247	polr2eb	100	98.571	ENSIPUG00000019801	polr2e	100	98.571	Ictalurus_punctatus
ENSGACG00000013247	polr2eb	100	94.286	ENSSTOG00000002853	POLR2E	100	94.286	Ictidomys_tridecemlineatus
ENSGACG00000013247	polr2eb	100	76.190	ENSJJAG00000003145	-	100	76.190	Jaculus_jaculus
ENSGACG00000013247	polr2eb	76	78.125	ENSJJAG00000015812	-	99	78.125	Jaculus_jaculus
ENSGACG00000013247	polr2eb	100	94.286	ENSJJAG00000016595	-	100	94.286	Jaculus_jaculus
ENSGACG00000013247	polr2eb	100	98.571	ENSKMAG00000005954	polr2eb	100	98.571	Kryptolebias_marmoratus
ENSGACG00000013247	polr2eb	100	98.571	ENSLBEG00000024802	polr2eb	100	98.571	Labrus_bergylta
ENSGACG00000013247	polr2eb	100	95.238	ENSLACG00000013686	POLR2E	100	95.238	Latimeria_chalumnae
ENSGACG00000013247	polr2eb	77	97.531	ENSLOCG00000004599	POLR2E	100	97.531	Lepisosteus_oculatus
ENSGACG00000013247	polr2eb	100	75.472	ENSLAFG00000025587	POLR2E	100	75.472	Loxodonta_africana
ENSGACG00000013247	polr2eb	100	94.286	ENSMFAG00000002884	POLR2E	100	94.286	Macaca_fascicularis
ENSGACG00000013247	polr2eb	100	94.286	ENSMMUG00000013927	POLR2E	100	94.286	Macaca_mulatta
ENSGACG00000013247	polr2eb	100	94.286	ENSMNEG00000034046	-	100	94.286	Macaca_nemestrina
ENSGACG00000013247	polr2eb	100	63.507	ENSMNEG00000033452	-	100	63.507	Macaca_nemestrina
ENSGACG00000013247	polr2eb	92	77.202	ENSMLEG00000012405	POLR2E	94	77.202	Mandrillus_leucophaeus
ENSGACG00000013247	polr2eb	100	98.571	ENSMAMG00000018703	polr2eb	100	98.571	Mastacembelus_armatus
ENSGACG00000013247	polr2eb	90	97.895	ENSMZEG00005010796	polr2eb	96	97.895	Maylandia_zebra
ENSGACG00000013247	polr2eb	100	93.839	ENSMGAG00000003769	POLR2E	100	93.839	Meleagris_gallopavo
ENSGACG00000013247	polr2eb	100	63.810	ENSMAUG00000011003	-	100	63.810	Mesocricetus_auratus
ENSGACG00000013247	polr2eb	92	93.264	ENSMAUG00000010125	-	100	93.717	Mesocricetus_auratus
ENSGACG00000013247	polr2eb	100	94.286	ENSMICG00000013063	POLR2E	100	94.286	Microcebus_murinus
ENSGACG00000013247	polr2eb	100	94.286	ENSMOCG00000013414	Polr2e	100	94.286	Microtus_ochrogaster
ENSGACG00000013247	polr2eb	100	83.810	ENSMMOG00000001161	polr2eb	100	83.810	Mola_mola
ENSGACG00000013247	polr2eb	91	87.958	ENSMMOG00000001167	polr2eb	88	87.958	Mola_mola
ENSGACG00000013247	polr2eb	100	94.762	ENSMODG00000005494	POLR2E	100	94.762	Monodelphis_domestica
ENSGACG00000013247	polr2eb	100	97.619	ENSMALG00000021888	polr2eb	100	97.619	Monopterus_albus
ENSGACG00000013247	polr2eb	100	94.286	MGP_CAROLIEiJ_G0015561	Polr2e	100	94.286	Mus_caroli
ENSGACG00000013247	polr2eb	100	94.286	ENSMUSG00000004667	Polr2e	100	94.286	Mus_musculus
ENSGACG00000013247	polr2eb	100	94.286	MGP_PahariEiJ_G0030974	Polr2e	100	94.286	Mus_pahari
ENSGACG00000013247	polr2eb	100	94.286	MGP_SPRETEiJ_G0016379	Polr2e	100	94.286	Mus_spretus
ENSGACG00000013247	polr2eb	100	93.333	ENSMPUG00000008953	POLR2E	100	93.333	Mustela_putorius_furo
ENSGACG00000013247	polr2eb	66	89.855	ENSMLUG00000006376	-	93	84.000	Myotis_lucifugus
ENSGACG00000013247	polr2eb	100	94.286	ENSMLUG00000013193	POLR2E	100	94.286	Myotis_lucifugus
ENSGACG00000013247	polr2eb	100	94.286	ENSNGAG00000001147	Polr2e	100	94.286	Nannospalax_galili
ENSGACG00000013247	polr2eb	85	70.950	ENSNGAG00000017344	-	96	70.950	Nannospalax_galili
ENSGACG00000013247	polr2eb	100	85.238	ENSNBRG00000022772	polr2eb	100	85.238	Neolamprologus_brichardi
ENSGACG00000013247	polr2eb	100	71.905	ENSNLEG00000031364	-	100	71.905	Nomascus_leucogenys
ENSGACG00000013247	polr2eb	100	90.521	ENSNLEG00000001207	-	100	90.521	Nomascus_leucogenys
ENSGACG00000013247	polr2eb	100	82.857	ENSOPRG00000008331	POLR2E	100	82.857	Ochotona_princeps
ENSGACG00000013247	polr2eb	100	94.286	ENSODEG00000013230	-	100	94.286	Octodon_degus
ENSGACG00000013247	polr2eb	100	68.571	ENSODEG00000011490	-	100	68.571	Octodon_degus
ENSGACG00000013247	polr2eb	89	83.871	ENSODEG00000007985	-	100	83.871	Octodon_degus
ENSGACG00000013247	polr2eb	100	97.619	ENSONIG00000002519	polr2eb	100	97.619	Oreochromis_niloticus
ENSGACG00000013247	polr2eb	100	98.095	ENSORLG00000015346	polr2eb	100	98.095	Oryzias_latipes
ENSGACG00000013247	polr2eb	100	98.095	ENSORLG00020020700	polr2e	100	98.095	Oryzias_latipes_hni
ENSGACG00000013247	polr2eb	100	98.095	ENSORLG00015016842	polr2e	100	98.095	Oryzias_latipes_hsok
ENSGACG00000013247	polr2eb	100	98.571	ENSOMEG00000002709	polr2eb	100	98.571	Oryzias_melastigma
ENSGACG00000013247	polr2eb	100	94.286	ENSOGAG00000012311	POLR2E	100	94.286	Otolemur_garnettii
ENSGACG00000013247	polr2eb	100	94.286	ENSOARG00000010994	POLR2E	100	94.286	Ovis_aries
ENSGACG00000013247	polr2eb	91	93.717	ENSPPAG00000003145	POLR2E	100	93.717	Pan_paniscus
ENSGACG00000013247	polr2eb	100	93.810	ENSPPRG00000000777	POLR2E	100	93.810	Panthera_pardus
ENSGACG00000013247	polr2eb	96	67.157	ENSPTIG00000012237	POLR2E	98	88.158	Panthera_tigris_altaica
ENSGACG00000013247	polr2eb	100	94.286	ENSPTRG00000010183	POLR2E	100	94.286	Pan_troglodytes
ENSGACG00000013247	polr2eb	100	94.286	ENSPANG00000018011	POLR2E	100	94.286	Papio_anubis
ENSGACG00000013247	polr2eb	100	97.619	ENSPKIG00000009607	POLR2E	100	97.619	Paramormyrops_kingsleyae
ENSGACG00000013247	polr2eb	100	97.619	ENSPKIG00000024123	POLR2E	100	97.619	Paramormyrops_kingsleyae
ENSGACG00000013247	polr2eb	98	90.732	ENSPSIG00000002870	POLR2E	99	90.732	Pelodiscus_sinensis
ENSGACG00000013247	polr2eb	100	85.714	ENSPMGG00000014354	polr2eb	100	85.714	Periophthalmus_magnuspinnatus
ENSGACG00000013247	polr2eb	100	94.286	ENSPEMG00000023261	Polr2e	100	94.286	Peromyscus_maniculatus_bairdii
ENSGACG00000013247	polr2eb	90	94.180	ENSPCIG00000007312	POLR2E	75	94.180	Phascolarctos_cinereus
ENSGACG00000013247	polr2eb	100	98.095	ENSPFOG00000005734	polr2eb	100	98.095	Poecilia_formosa
ENSGACG00000013247	polr2eb	100	98.095	ENSPLAG00000014496	polr2eb	100	98.095	Poecilia_latipinna
ENSGACG00000013247	polr2eb	100	98.095	ENSPMEG00000008053	polr2eb	100	98.095	Poecilia_mexicana
ENSGACG00000013247	polr2eb	100	98.095	ENSPREG00000006489	polr2eb	100	98.095	Poecilia_reticulata
ENSGACG00000013247	polr2eb	100	87.678	ENSPPYG00000009305	POLR2E	100	87.678	Pongo_abelii
ENSGACG00000013247	polr2eb	53	91.892	ENSPCAG00000016605	POLR2E	100	91.892	Procavia_capensis
ENSGACG00000013247	polr2eb	100	94.286	ENSPCOG00000014491	POLR2E	100	94.286	Propithecus_coquereli
ENSGACG00000013247	polr2eb	65	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSGACG00000013247	polr2eb	90	97.895	ENSPNYG00000019797	polr2eb	96	97.895	Pundamilia_nyererei
ENSGACG00000013247	polr2eb	100	98.095	ENSPNAG00000026263	POLR2E	100	98.095	Pygocentrus_nattereri
ENSGACG00000013247	polr2eb	100	94.286	ENSRNOG00000013545	Polr2e	100	94.286	Rattus_norvegicus
ENSGACG00000013247	polr2eb	100	69.668	ENSRBIG00000027259	-	100	69.668	Rhinopithecus_bieti
ENSGACG00000013247	polr2eb	100	94.286	ENSRBIG00000028726	-	100	94.286	Rhinopithecus_bieti
ENSGACG00000013247	polr2eb	100	94.286	ENSRROG00000043763	POLR2E	100	94.286	Rhinopithecus_roxellana
ENSGACG00000013247	polr2eb	99	44.495	YBR154C	RPB5	98	44.495	Saccharomyces_cerevisiae
ENSGACG00000013247	polr2eb	100	94.286	ENSSBOG00000027241	POLR2E	100	94.286	Saimiri_boliviensis_boliviensis
ENSGACG00000013247	polr2eb	100	94.762	ENSSHAG00000010690	POLR2E	100	94.762	Sarcophilus_harrisii
ENSGACG00000013247	polr2eb	100	98.571	ENSSFOG00015006073	polr2e	100	98.571	Scleropages_formosus
ENSGACG00000013247	polr2eb	100	98.571	ENSSMAG00000012782	polr2eb	100	98.571	Scophthalmus_maximus
ENSGACG00000013247	polr2eb	100	98.571	ENSSDUG00000003352	polr2eb	100	98.571	Seriola_dumerili
ENSGACG00000013247	polr2eb	100	98.571	ENSSLDG00000004965	polr2eb	100	98.571	Seriola_lalandi_dorsalis
ENSGACG00000013247	polr2eb	100	94.762	ENSSPUG00000006114	POLR2E	100	94.762	Sphenodon_punctatus
ENSGACG00000013247	polr2eb	100	98.571	ENSSPAG00000017556	polr2eb	100	98.571	Stegastes_partitus
ENSGACG00000013247	polr2eb	100	94.286	ENSSSCG00000021472	POLR2E	100	94.286	Sus_scrofa
ENSGACG00000013247	polr2eb	66	87.143	ENSTGUG00000000922	POLR2E	99	87.143	Taeniopygia_guttata
ENSGACG00000013247	polr2eb	95	94.975	ENSTRUG00000018238	polr2eb	100	85.714	Takifugu_rubripes
ENSGACG00000013247	polr2eb	100	98.571	ENSTNIG00000013187	polr2eb	100	98.571	Tetraodon_nigroviridis
ENSGACG00000013247	polr2eb	100	93.810	ENSTTRG00000001484	POLR2E	100	93.810	Tursiops_truncatus
ENSGACG00000013247	polr2eb	92	90.722	ENSUAMG00000009166	POLR2E	100	80.952	Ursus_americanus
ENSGACG00000013247	polr2eb	100	94.286	ENSVVUG00000022818	POLR2E	54	94.286	Vulpes_vulpes
ENSGACG00000013247	polr2eb	100	95.714	ENSXETG00000003291	polr2e	100	95.714	Xenopus_tropicalis
ENSGACG00000013247	polr2eb	100	85.238	ENSXCOG00000009197	polr2eb	100	85.238	Xiphophorus_couchianus
ENSGACG00000013247	polr2eb	100	98.095	ENSXMAG00000026495	polr2eb	100	98.095	Xiphophorus_maculatus