EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2458 bases
Position: chrgroupVIII:17242910-17245367
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017600	MMR_HSR1	PF01926.23	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017634	-	874	-	ENSGACP00000017600	220 (aa)	-	G3PJ21

Gene Model

Click here to download ENSGACG00000013297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013297	-	93	39.706	ENSGACG00000006162	-	89	39.706
ENSGACG00000013297	-	75	30.409	ENSGACG00000015457	dnajc27	79	30.409
ENSGACG00000013297	-	52	30.252	ENSGACG00000008143	arl4cb	60	30.252
ENSGACG00000013297	-	72	46.541	ENSGACG00000014915	si:dkey-16l2.16	96	40.476
ENSGACG00000013297	-	76	52.326	ENSGACG00000016164	rab4a	79	52.326
ENSGACG00000013297	-	83	36.216	ENSGACG00000019540	rab33ba	83	36.216
ENSGACG00000013297	-	95	44.550	ENSGACG00000013401	zgc:171927	97	44.550
ENSGACG00000013297	-	81	38.298	ENSGACG00000000807	-	90	38.298
ENSGACG00000013297	-	76	42.262	ENSGACG00000005979	RAB15	81	42.262
ENSGACG00000013297	-	76	52.381	ENSGACG00000003864	rab1ab	83	52.381
ENSGACG00000013297	-	82	70.718	ENSGACG00000013249	rab25b	86	70.718
ENSGACG00000013297	-	70	38.065	ENSGACG00000005397	si:ch211-247i17.1	89	38.065
ENSGACG00000013297	-	81	37.500	ENSGACG00000018745	rab33a	77	37.500
ENSGACG00000013297	-	75	49.398	ENSGACG00000013548	rab35b	99	43.541
ENSGACG00000013297	-	71	39.130	ENSGACG00000003972	rab9a	78	39.130
ENSGACG00000013297	-	73	45.963	ENSGACG00000008659	rab5c	73	45.963
ENSGACG00000013297	-	80	31.522	ENSGACG00000003726	rab6ba	86	31.522
ENSGACG00000013297	-	81	45.506	ENSGACG00000011925	rab13	88	45.506
ENSGACG00000013297	-	78	40.909	ENSGACG00000018291	rab9b	85	40.909
ENSGACG00000013297	-	94	37.264	ENSGACG00000016639	rab12	83	37.264
ENSGACG00000013297	-	98	59.722	ENSGACG00000004965	rab25a	99	59.722
ENSGACG00000013297	-	81	36.517	ENSGACG00000019767	-	88	36.517
ENSGACG00000013297	-	92	35.185	ENSGACG00000014678	rab36	77	35.185
ENSGACG00000013297	-	78	33.140	ENSGACG00000006151	rab23	80	32.984
ENSGACG00000013297	-	68	36.000	ENSGACG00000011340	hrasb	85	37.037
ENSGACG00000013297	-	71	35.032	ENSGACG00000013721	rab6bb	75	35.032
ENSGACG00000013297	-	78	38.150	ENSGACG00000001725	zgc:101559	74	38.150
ENSGACG00000013297	-	72	40.491	ENSGACG00000009647	RAB7A	78	40.491
ENSGACG00000013297	-	77	45.029	ENSGACG00000016395	rab18b	83	45.029
ENSGACG00000013297	-	55	36.364	ENSGACG00000003527	rab20	50	36.364
ENSGACG00000013297	-	75	43.373	ENSGACG00000007722	rab15	90	46.000
ENSGACG00000013297	-	73	43.478	ENSGACG00000005608	rab22a	83	43.478
ENSGACG00000013297	-	77	44.509	ENSGACG00000001694	rab18a	82	44.509
ENSGACG00000013297	-	95	40.000	ENSGACG00000012006	rab30	97	42.051
ENSGACG00000013297	-	99	81.106	ENSGACG00000013259	rab11al	99	81.106
ENSGACG00000013297	-	99	94.037	ENSGACG00000015479	rab11bb	100	94.037
ENSGACG00000013297	-	74	31.214	ENSGACG00000018711	rasl11a	70	31.214
ENSGACG00000013297	-	75	52.727	ENSGACG00000016799	-	96	52.727
ENSGACG00000013297	-	77	53.529	ENSGACG00000000789	rab1ba	83	53.529
ENSGACG00000013297	-	74	32.335	ENSGACG00000019134	si:cabz01085950.1	82	32.335
ENSGACG00000013297	-	79	44.318	ENSGACG00000001950	RAB39B	82	44.318
ENSGACG00000013297	-	76	44.970	ENSGACG00000018847	-	75	44.970
ENSGACG00000013297	-	95	46.698	ENSGACG00000014905	rab2a	99	46.698
ENSGACG00000013297	-	76	36.310	ENSGACG00000012474	rabl2	73	36.310
ENSGACG00000013297	-	69	36.943	ENSGACG00000011661	kras	85	37.870
ENSGACG00000013297	-	76	46.746	ENSGACG00000020437	-	79	46.746
ENSGACG00000013297	-	73	32.515	ENSGACG00000007818	si:ch73-116o1.2	85	34.286
ENSGACG00000013297	-	93	40.686	ENSGACG00000004997	rab5aa	89	40.686
ENSGACG00000013297	-	71	36.943	ENSGACG00000013611	-	77	36.943
ENSGACG00000013297	-	90	33.000	ENSGACG00000020356	rab6a	92	33.000
ENSGACG00000013297	-	71	36.306	ENSGACG00000017153	rab41	74	36.306
ENSGACG00000013297	-	92	33.333	ENSGACG00000004844	rras	95	33.333
ENSGACG00000013297	-	80	36.813	ENSGACG00000014578	RAB9A	89	36.813
ENSGACG00000013297	-	70	34.615	ENSGACG00000011190	rab34a	59	34.615
ENSGACG00000013297	-	72	31.250	ENSGACG00000016680	rheb	86	31.250
ENSGACG00000013297	-	94	32.394	ENSGACG00000011607	rab32b	91	32.394
ENSGACG00000013297	-	53	30.833	ENSGACG00000003710	arl4d	60	30.833
ENSGACG00000013297	-	97	46.009	ENSGACG00000019642	-	99	46.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013297	-	99	94.495	ENSAPOG00000023455	rab11bb	100	94.495	Acanthochromis_polyacanthus
ENSGACG00000013297	-	99	95.413	ENSACIG00000024376	-	100	95.413	Amphilophus_citrinellus
ENSGACG00000013297	-	99	83.028	ENSACIG00000019631	rab11bb	100	83.028	Amphilophus_citrinellus
ENSGACG00000013297	-	99	95.413	ENSAOCG00000018849	-	100	95.413	Amphiprion_ocellaris
ENSGACG00000013297	-	99	94.495	ENSAOCG00000018239	rab11bb	100	94.495	Amphiprion_ocellaris
ENSGACG00000013297	-	99	94.495	ENSAPEG00000016590	rab11bb	100	94.495	Amphiprion_percula
ENSGACG00000013297	-	99	95.872	ENSATEG00000023725	-	100	95.872	Anabas_testudineus
ENSGACG00000013297	-	99	94.495	ENSATEG00000017696	rab11bb	100	94.495	Anabas_testudineus
ENSGACG00000013297	-	95	94.258	ENSAPLG00000011046	-	96	94.258	Anas_platyrhynchos
ENSGACG00000013297	-	99	94.495	ENSACLG00000007076	rab11bb	100	94.495	Astatotilapia_calliptera
ENSGACG00000013297	-	99	95.413	ENSACLG00000005446	-	100	95.413	Astatotilapia_calliptera
ENSGACG00000013297	-	99	94.495	ENSAMXG00000037623	-	100	94.495	Astyanax_mexicanus
ENSGACG00000013297	-	99	94.954	ENSAMXG00000042655	rab11bb	100	94.954	Astyanax_mexicanus
ENSGACG00000013297	-	99	94.495	ENSBTAG00000002475	RAB11B	100	94.495	Bos_taurus
ENSGACG00000013297	-	95	92.344	ENSCHIG00000022426	-	93	92.344	Capra_hircus
ENSGACG00000013297	-	99	94.495	ENSCATG00000029188	-	100	94.495	Cercocebus_atys
ENSGACG00000013297	-	99	95.413	ENSCPBG00000017056	-	100	95.413	Chrysemys_picta_bellii
ENSGACG00000013297	-	99	94.954	ENSCSEG00000007239	-	100	94.954	Cynoglossus_semilaevis
ENSGACG00000013297	-	99	94.495	ENSCSEG00000012149	rab11bb	100	94.495	Cynoglossus_semilaevis
ENSGACG00000013297	-	99	94.495	ENSCVAG00000017021	-	100	94.495	Cyprinodon_variegatus
ENSGACG00000013297	-	99	94.495	ENSCVAG00000019718	-	100	94.495	Cyprinodon_variegatus
ENSGACG00000013297	-	99	95.872	ENSCVAG00000019751	-	100	95.872	Cyprinodon_variegatus
ENSGACG00000013297	-	99	93.578	ENSDARG00000090086	rab11bb	100	93.578	Danio_rerio
ENSGACG00000013297	-	99	92.166	ENSETEG00000000905	-	99	92.166	Echinops_telfairi
ENSGACG00000013297	-	98	90.698	ENSEASG00005003708	-	99	90.698	Equus_asinus_asinus
ENSGACG00000013297	-	98	90.698	ENSECAG00000000716	RAB11B	99	90.698	Equus_caballus
ENSGACG00000013297	-	99	94.521	ENSELUG00000020948	-	98	96.875	Esox_lucius
ENSGACG00000013297	-	99	94.954	ENSELUG00000000916	-	100	94.954	Esox_lucius
ENSGACG00000013297	-	99	93.578	ENSELUG00000021148	rab11bb	100	93.578	Esox_lucius
ENSGACG00000013297	-	99	95.413	ENSFALG00000011828	-	100	95.413	Ficedula_albicollis
ENSGACG00000013297	-	99	95.872	ENSFHEG00000022676	-	100	95.872	Fundulus_heteroclitus
ENSGACG00000013297	-	99	94.495	ENSFHEG00000018353	rab11bb	100	94.495	Fundulus_heteroclitus
ENSGACG00000013297	-	98	92.593	ENSGMOG00000009668	-	99	92.593	Gadus_morhua
ENSGACG00000013297	-	99	94.495	ENSGMOG00000009211	rab11bb	100	94.495	Gadus_morhua
ENSGACG00000013297	-	99	95.413	ENSGALG00000000613	RAB11B	100	95.413	Gallus_gallus
ENSGACG00000013297	-	99	94.495	ENSGAFG00000007102	rab11bb	100	94.495	Gambusia_affinis
ENSGACG00000013297	-	99	94.495	ENSGGOG00000014516	RAB11B	100	94.495	Gorilla_gorilla
ENSGACG00000013297	-	99	95.413	ENSHBUG00000009947	-	100	95.413	Haplochromis_burtoni
ENSGACG00000013297	-	99	94.495	ENSHBUG00000014777	rab11bb	100	94.495	Haplochromis_burtoni
ENSGACG00000013297	-	99	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSGACG00000013297	-	99	94.037	ENSHCOG00000002423	rab11bb	100	94.037	Hippocampus_comes
ENSGACG00000013297	-	99	88.991	ENSHCOG00000000985	-	100	88.991	Hippocampus_comes
ENSGACG00000013297	-	99	94.495	ENSIPUG00000025100	rab11b	100	94.495	Ictalurus_punctatus
ENSGACG00000013297	-	99	94.495	ENSIPUG00000019927	rab11bb	100	94.495	Ictalurus_punctatus
ENSGACG00000013297	-	99	94.495	ENSKMAG00000009033	rab11bb	100	94.495	Kryptolebias_marmoratus
ENSGACG00000013297	-	99	95.413	ENSKMAG00000006170	-	100	95.413	Kryptolebias_marmoratus
ENSGACG00000013297	-	99	94.495	ENSLBEG00000015248	rab11bb	100	94.495	Labrus_bergylta
ENSGACG00000013297	-	99	87.615	ENSLBEG00000005981	-	100	87.615	Labrus_bergylta
ENSGACG00000013297	-	99	94.954	ENSLBEG00000004172	-	100	94.954	Labrus_bergylta
ENSGACG00000013297	-	99	95.413	ENSLACG00000016857	-	100	95.413	Latimeria_chalumnae
ENSGACG00000013297	-	99	94.495	ENSMFAG00000003654	RAB11B	100	94.495	Macaca_fascicularis
ENSGACG00000013297	-	99	94.495	ENSMLEG00000030601	-	100	94.495	Mandrillus_leucophaeus
ENSGACG00000013297	-	99	94.037	ENSMAMG00000018533	-	100	94.037	Mastacembelus_armatus
ENSGACG00000013297	-	99	94.037	ENSMAMG00000006378	rab11bb	100	94.037	Mastacembelus_armatus
ENSGACG00000013297	-	99	95.413	ENSMZEG00005010975	-	100	95.413	Maylandia_zebra
ENSGACG00000013297	-	99	94.495	ENSMZEG00005003352	rab11bb	100	94.495	Maylandia_zebra
ENSGACG00000013297	-	99	94.495	ENSMICG00000034065	-	100	94.495	Microcebus_murinus
ENSGACG00000013297	-	99	96.774	ENSMMOG00000001238	-	99	96.774	Mola_mola
ENSGACG00000013297	-	99	95.413	ENSMMOG00000001250	-	100	95.413	Mola_mola
ENSGACG00000013297	-	93	95.122	ENSMMOG00000007917	rab11bb	100	95.122	Mola_mola
ENSGACG00000013297	-	99	95.413	ENSMODG00000003841	-	100	95.413	Monodelphis_domestica
ENSGACG00000013297	-	99	94.495	ENSMALG00000022187	rab11bb	100	94.495	Monopterus_albus
ENSGACG00000013297	-	93	85.990	ENSMLUG00000006677	-	100	85.990	Myotis_lucifugus
ENSGACG00000013297	-	99	94.495	ENSNBRG00000000372	rab11bb	100	94.495	Neolamprologus_brichardi
ENSGACG00000013297	-	99	95.413	ENSNBRG00000023885	-	100	95.413	Neolamprologus_brichardi
ENSGACG00000013297	-	99	95.413	ENSMEUG00000003686	-	100	95.413	Notamacropus_eugenii
ENSGACG00000013297	-	99	94.495	ENSONIG00000010435	rab11bb	100	94.495	Oreochromis_niloticus
ENSGACG00000013297	-	99	95.413	ENSONIG00000002544	-	100	95.413	Oreochromis_niloticus
ENSGACG00000013297	-	50	97.248	ENSOANG00000031567	-	78	97.248	Ornithorhynchus_anatinus
ENSGACG00000013297	-	99	93.578	ENSORLG00000015284	-	72	93.578	Oryzias_latipes
ENSGACG00000013297	-	99	94.037	ENSORLG00000013938	rab11bb	100	94.037	Oryzias_latipes
ENSGACG00000013297	-	99	93.548	ENSORLG00020020844	RAB11B	99	93.548	Oryzias_latipes_hni
ENSGACG00000013297	-	99	94.037	ENSORLG00020019393	rab11bb	100	94.037	Oryzias_latipes_hni
ENSGACG00000013297	-	99	94.037	ENSORLG00015020173	rab11bb	100	94.037	Oryzias_latipes_hsok
ENSGACG00000013297	-	99	93.548	ENSORLG00015016999	RAB11B	99	93.548	Oryzias_latipes_hsok
ENSGACG00000013297	-	99	94.495	ENSOMEG00000002562	-	100	94.495	Oryzias_melastigma
ENSGACG00000013297	-	99	94.495	ENSOMEG00000017806	-	100	94.495	Oryzias_melastigma
ENSGACG00000013297	-	99	94.495	ENSPPAG00000028589	-	100	94.495	Pan_paniscus
ENSGACG00000013297	-	99	94.495	ENSPTRG00000010422	RAB11B	100	94.495	Pan_troglodytes
ENSGACG00000013297	-	99	94.495	ENSPANG00000007765	-	100	94.495	Papio_anubis
ENSGACG00000013297	-	99	94.495	ENSPKIG00000011640	rab11bb	100	94.495	Paramormyrops_kingsleyae
ENSGACG00000013297	-	97	95.794	ENSPKIG00000001389	-	69	95.794	Paramormyrops_kingsleyae
ENSGACG00000013297	-	99	95.872	ENSPKIG00000011703	-	100	95.872	Paramormyrops_kingsleyae
ENSGACG00000013297	-	97	89.954	ENSPSIG00000010242	-	85	89.954	Pelodiscus_sinensis
ENSGACG00000013297	-	99	94.495	ENSPMGG00000009435	rab11bb	100	94.495	Periophthalmus_magnuspinnatus
ENSGACG00000013297	-	99	94.931	ENSPMGG00000014336	-	99	94.931	Periophthalmus_magnuspinnatus
ENSGACG00000013297	-	99	94.495	ENSPMGG00000014333	-	100	94.495	Periophthalmus_magnuspinnatus
ENSGACG00000013297	-	96	93.868	ENSPCIG00000020371	-	99	93.868	Phascolarctos_cinereus
ENSGACG00000013297	-	99	94.495	ENSPFOG00000024114	-	100	94.495	Poecilia_formosa
ENSGACG00000013297	-	99	95.413	ENSPFOG00000006224	-	100	95.413	Poecilia_formosa
ENSGACG00000013297	-	99	95.413	ENSPLAG00000014207	-	100	95.413	Poecilia_latipinna
ENSGACG00000013297	-	99	94.495	ENSPLAG00000001598	rab11bb	100	94.495	Poecilia_latipinna
ENSGACG00000013297	-	99	95.413	ENSPMEG00000007842	-	100	95.413	Poecilia_mexicana
ENSGACG00000013297	-	99	94.495	ENSPMEG00000012389	rab11bb	100	94.495	Poecilia_mexicana
ENSGACG00000013297	-	99	94.495	ENSPREG00000014269	rab11bb	100	94.495	Poecilia_reticulata
ENSGACG00000013297	-	99	94.954	ENSPREG00000006336	-	100	94.954	Poecilia_reticulata
ENSGACG00000013297	-	99	94.495	ENSPNYG00000004098	rab11bb	100	94.495	Pundamilia_nyererei
ENSGACG00000013297	-	99	95.413	ENSPNYG00000019611	-	100	95.413	Pundamilia_nyererei
ENSGACG00000013297	-	99	94.495	ENSRROG00000037812	-	100	94.495	Rhinopithecus_roxellana
ENSGACG00000013297	-	96	93.396	ENSSHAG00000006816	-	97	93.396	Sarcophilus_harrisii
ENSGACG00000013297	-	99	95.872	ENSSFOG00015009042	rab11bb	100	95.872	Scleropages_formosus
ENSGACG00000013297	-	99	70.721	ENSSFOG00015006245	-	100	70.721	Scleropages_formosus
ENSGACG00000013297	-	99	94.037	ENSSMAG00000004922	rab11bb	100	94.037	Scophthalmus_maximus
ENSGACG00000013297	-	99	94.954	ENSSMAG00000018613	-	100	94.954	Scophthalmus_maximus
ENSGACG00000013297	-	99	95.413	ENSSDUG00000002934	-	100	95.413	Seriola_dumerili
ENSGACG00000013297	-	99	94.495	ENSSDUG00000013558	rab11bb	100	94.495	Seriola_dumerili
ENSGACG00000013297	-	99	94.495	ENSSLDG00000020676	rab11bb	100	94.495	Seriola_lalandi_dorsalis
ENSGACG00000013297	-	99	95.413	ENSSLDG00000005275	-	100	95.413	Seriola_lalandi_dorsalis
ENSGACG00000013297	-	99	95.413	ENSSPUG00000002243	-	100	95.413	Sphenodon_punctatus
ENSGACG00000013297	-	99	95.413	ENSSPAG00000014559	-	100	95.413	Stegastes_partitus
ENSGACG00000013297	-	99	94.495	ENSSPAG00000011419	rab11bb	100	94.495	Stegastes_partitus
ENSGACG00000013297	-	99	95.413	ENSTGUG00000000084	-	100	95.413	Taeniopygia_guttata
ENSGACG00000013297	-	98	94.907	ENSTRUG00000021619	-	100	94.907	Takifugu_rubripes
ENSGACG00000013297	-	99	94.495	ENSTRUG00000022029	rab11bb	100	94.495	Takifugu_rubripes
ENSGACG00000013297	-	99	96.774	ENSTRUG00000021614	-	99	96.774	Takifugu_rubripes
ENSGACG00000013297	-	92	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSGACG00000013297	-	99	93.578	ENSTNIG00000011081	rab11bb	100	93.578	Tetraodon_nigroviridis
ENSGACG00000013297	-	98	94.907	ENSTNIG00000013182	-	100	94.907	Tetraodon_nigroviridis
ENSGACG00000013297	-	99	96.313	ENSTNIG00000013184	-	99	96.313	Tetraodon_nigroviridis
ENSGACG00000013297	-	93	94.146	ENSUAMG00000006639	-	99	94.146	Ursus_americanus
ENSGACG00000013297	-	99	94.091	ENSXETG00000025484	rab11b.1	99	94.091	Xenopus_tropicalis
ENSGACG00000013297	-	99	95.413	ENSXCOG00000009190	-	100	95.413	Xiphophorus_couchianus
ENSGACG00000013297	-	99	94.495	ENSXCOG00000008042	-	100	94.495	Xiphophorus_couchianus
ENSGACG00000013297	-	99	94.495	ENSXMAG00000011926	rab11bb	100	94.495	Xiphophorus_maculatus
ENSGACG00000013297	-	99	94.954	ENSXMAG00000024840	-	100	94.954	Xiphophorus_maculatus