EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013328 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2890 bases
Position: chrgroupXI:12855878-12858767
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017621	RRM_1	PF00076.22	5.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017655	ALYREF-201	1017	-	ENSGACP00000017621	258 (aa)	-	G3PJ42

Gene Model

Click here to download ENSGACG00000013328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013328	ALYREF	100	54.982	ENSGACG00000018178	-	100	48.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013328	ALYREF	100	72.180	ENSG00000183684	ALYREF	97	70.189	Homo_sapiens
ENSGACG00000013328	ALYREF	100	73.897	ENSAPOG00000018455	ALYREF	100	83.883	Acanthochromis_polyacanthus
ENSGACG00000013328	ALYREF	73	77.895	ENSAMEG00000017463	ALYREF	74	79.032	Ailuropoda_melanoleuca
ENSGACG00000013328	ALYREF	100	66.667	ENSACAG00000010526	ALYREF	100	66.667	Anolis_carolinensis
ENSGACG00000013328	ALYREF	73	76.963	ENSANAG00000022638	-	81	74.093	Aotus_nancymaae
ENSGACG00000013328	ALYREF	100	63.019	ENSANAG00000028229	-	78	62.264	Aotus_nancymaae
ENSGACG00000013328	ALYREF	100	71.429	ENSBTAG00000008498	ALYREF	100	70.566	Bos_taurus
ENSGACG00000013328	ALYREF	100	71.321	ENSCJAG00000039942	ALYREF	97	70.566	Callithrix_jacchus
ENSGACG00000013328	ALYREF	100	71.805	ENSCAFG00000005877	ALYREF	100	70.943	Canis_familiaris
ENSGACG00000013328	ALYREF	100	71.805	ENSCAFG00020009815	ALYREF	100	70.943	Canis_lupus_dingo
ENSGACG00000013328	ALYREF	100	70.787	ENSCHIG00000017396	ALYREF	97	69.925	Capra_hircus
ENSGACG00000013328	ALYREF	74	72.021	ENSTSYG00000002272	ALYREF	78	72.021	Carlito_syrichta
ENSGACG00000013328	ALYREF	53	75.000	ENSCAPG00000014727	-	100	75.000	Cavia_aperea
ENSGACG00000013328	ALYREF	100	72.075	ENSCPOG00000013710	ALYREF	100	70.943	Cavia_porcellus
ENSGACG00000013328	ALYREF	100	73.308	ENSCCAG00000020578	-	97	70.566	Cebus_capucinus
ENSGACG00000013328	ALYREF	100	61.923	ENSCCAG00000030237	-	100	60.385	Cebus_capucinus
ENSGACG00000013328	ALYREF	100	72.556	ENSCATG00000033169	ALYREF	97	70.566	Cercocebus_atys
ENSGACG00000013328	ALYREF	100	68.702	ENSCLAG00000015026	ALYREF	100	68.726	Chinchilla_lanigera
ENSGACG00000013328	ALYREF	100	72.556	ENSCSAG00000002216	ALYREF	97	70.566	Chlorocebus_sabaeus
ENSGACG00000013328	ALYREF	83	68.950	ENSCANG00000034056	ALYREF	96	74.346	Colobus_angolensis_palliatus
ENSGACG00000013328	ALYREF	100	72.348	ENSCGRG00001018191	-	100	71.212	Cricetulus_griseus_chok1gshd
ENSGACG00000013328	ALYREF	73	76.720	ENSCGRG00000015871	-	100	67.788	Cricetulus_griseus_crigri
ENSGACG00000013328	ALYREF	72	56.633	ENSCSEG00000015438	-	98	57.653	Cynoglossus_semilaevis
ENSGACG00000013328	ALYREF	69	77.778	ENSDNOG00000002563	ALYREF	75	78.333	Dasypus_novemcinctus
ENSGACG00000013328	ALYREF	82	73.272	ENSDORG00000025849	-	73	78.022	Dipodomys_ordii
ENSGACG00000013328	ALYREF	69	79.444	ENSETEG00000016596	ALYREF	100	77.222	Echinops_telfairi
ENSGACG00000013328	ALYREF	100	71.053	ENSEASG00005005824	ALYREF	95	70.189	Equus_asinus_asinus
ENSGACG00000013328	ALYREF	100	71.053	ENSECAG00000018754	ALYREF	95	70.189	Equus_caballus
ENSGACG00000013328	ALYREF	66	73.596	ENSEEUG00000010164	ALYREF	100	73.596	Erinaceus_europaeus
ENSGACG00000013328	ALYREF	100	71.429	ENSFCAG00000022549	ALYREF	98	70.566	Felis_catus
ENSGACG00000013328	ALYREF	81	70.423	ENSFDAG00000001213	ALYREF	90	72.500	Fukomys_damarensis
ENSGACG00000013328	ALYREF	100	71.756	ENSGALG00000007237	ALYREF	100	70.881	Gallus_gallus
ENSGACG00000013328	ALYREF	100	71.264	ENSGAGG00000008536	ALYREF	100	71.648	Gopherus_agassizii
ENSGACG00000013328	ALYREF	100	72.556	ENSGGOG00000013935	ALYREF	99	69.925	Gorilla_gorilla
ENSGACG00000013328	ALYREF	100	71.698	ENSHGLG00000008293	ALYREF	100	70.833	Heterocephalus_glaber_female
ENSGACG00000013328	ALYREF	71	77.174	ENSHGLG00100006949	ALYREF	77	76.503	Heterocephalus_glaber_male
ENSGACG00000013328	ALYREF	100	79.926	ENSHCOG00000015046	ALYREF	100	82.090	Hippocampus_comes
ENSGACG00000013328	ALYREF	100	72.180	ENSJJAG00000004134	-	100	69.434	Jaculus_jaculus
ENSGACG00000013328	ALYREF	100	71.483	ENSLACG00000005694	ALYREF	100	72.453	Latimeria_chalumnae
ENSGACG00000013328	ALYREF	73	79.365	ENSLAFG00000003083	ALYREF	100	78.947	Loxodonta_africana
ENSGACG00000013328	ALYREF	100	72.692	ENSMFAG00000001394	ALYREF	97	70.656	Macaca_fascicularis
ENSGACG00000013328	ALYREF	100	72.556	ENSMMUG00000012884	ALYREF	97	70.566	Macaca_mulatta
ENSGACG00000013328	ALYREF	100	72.556	ENSMNEG00000043666	ALYREF	97	70.566	Macaca_nemestrina
ENSGACG00000013328	ALYREF	72	75.521	ENSMLEG00000043353	ALYREF	87	74.869	Mandrillus_leucophaeus
ENSGACG00000013328	ALYREF	100	66.415	ENSMAUG00000020552	-	100	66.409	Mesocricetus_auratus
ENSGACG00000013328	ALYREF	100	71.321	ENSMICG00000017403	ALYREF	97	70.943	Microcebus_murinus
ENSGACG00000013328	ALYREF	100	68.441	ENSMOCG00000016792	-	100	69.231	Microtus_ochrogaster
ENSGACG00000013328	ALYREF	99	69.318	ENSMODG00000003030	ALYREF	84	69.697	Monodelphis_domestica
ENSGACG00000013328	ALYREF	100	79.705	ENSMALG00000019408	ALYREF	100	80.443	Monopterus_albus
ENSGACG00000013328	ALYREF	100	61.154	MGP_CAROLIEiJ_G0014874	Alyref2	100	60.000	Mus_caroli
ENSGACG00000013328	ALYREF	100	72.727	MGP_CAROLIEiJ_G0017529	Alyref	100	71.970	Mus_caroli
ENSGACG00000013328	ALYREF	100	52.083	ENSMUSG00000091779	Gm21293	100	48.070	Mus_musculus
ENSGACG00000013328	ALYREF	93	54.772	ENSMUSG00000091101	Gm4302	60	57.000	Mus_musculus
ENSGACG00000013328	ALYREF	100	51.370	ENSMUSG00000090854	Gm4340	100	47.059	Mus_musculus
ENSGACG00000013328	ALYREF	100	52.083	ENSMUSG00000095022	Gm20765	100	48.070	Mus_musculus
ENSGACG00000013328	ALYREF	81	58.768	ENSMUSG00000112931	Gm4303	61	57.000	Mus_musculus
ENSGACG00000013328	ALYREF	100	52.083	ENSMUSG00000097550	Gm21304	100	48.070	Mus_musculus
ENSGACG00000013328	ALYREF	100	52.083	ENSMUSG00000097427	Gm6763	98	52.695	Mus_musculus
ENSGACG00000013328	ALYREF	100	52.083	ENSMUSG00000094144	Gm21312	100	48.070	Mus_musculus
ENSGACG00000013328	ALYREF	100	52.083	ENSMUSG00000097878	Gm8764	98	52.695	Mus_musculus
ENSGACG00000013328	ALYREF	81	58.768	ENSMUSG00000096744	Gm4307	61	57.000	Mus_musculus
ENSGACG00000013328	ALYREF	100	63.077	ENSMUSG00000060244	Alyref2	100	61.923	Mus_musculus
ENSGACG00000013328	ALYREF	100	72.727	ENSMUSG00000025134	Alyref	100	71.970	Mus_musculus
ENSGACG00000013328	ALYREF	100	53.333	ENSMUSG00000117091	AC153137.1	100	49.434	Mus_musculus
ENSGACG00000013328	ALYREF	100	53.532	ENSMUSG00000086727	4931428L18Rik	100	50.943	Mus_musculus
ENSGACG00000013328	ALYREF	89	56.034	ENSMUSG00000096640	Gm4312	61	57.000	Mus_musculus
ENSGACG00000013328	ALYREF	81	58.768	ENSMUSG00000112856	Gm4305	61	57.000	Mus_musculus
ENSGACG00000013328	ALYREF	89	56.034	ENSMUSG00000094314	Gm4301	61	57.000	Mus_musculus
ENSGACG00000013328	ALYREF	81	59.048	MGP_PahariEiJ_G0027255	-	78	57.000	Mus_pahari
ENSGACG00000013328	ALYREF	81	59.048	MGP_PahariEiJ_G0027254	-	80	57.000	Mus_pahari
ENSGACG00000013328	ALYREF	73	77.320	MGP_PahariEiJ_G0018656	-	99	76.289	Mus_pahari
ENSGACG00000013328	ALYREF	100	72.727	MGP_PahariEiJ_G0018655	-	100	71.970	Mus_pahari
ENSGACG00000013328	ALYREF	100	62.692	MGP_SPRETEiJ_G0015679	Alyref2	100	61.538	Mus_spretus
ENSGACG00000013328	ALYREF	100	72.727	MGP_SPRETEiJ_G0018373	Alyref	100	71.970	Mus_spretus
ENSGACG00000013328	ALYREF	98	57.647	ENSMLUG00000026271	-	79	54.150	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	51.953	ENSMLUG00000022869	-	69	55.224	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	54.902	ENSMLUG00000025677	-	77	50.769	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	61.660	ENSMLUG00000027516	-	78	58.103	Myotis_lucifugus
ENSGACG00000013328	ALYREF	79	56.250	ENSMLUG00000028343	-	90	54.497	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	55.078	ENSMLUG00000030407	-	77	48.872	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	50.965	ENSMLUG00000024471	-	70	53.500	Myotis_lucifugus
ENSGACG00000013328	ALYREF	100	47.407	ENSMLUG00000023213	-	74	49.741	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	53.516	ENSMLUG00000027352	-	77	50.385	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	57.812	ENSMLUG00000002626	-	98	56.641	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	50.195	ENSMLUG00000015043	-	84	53.535	Myotis_lucifugus
ENSGACG00000013328	ALYREF	73	75.661	ENSMLUG00000009555	-	68	74.737	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	54.724	ENSMLUG00000024976	-	66	59.794	Myotis_lucifugus
ENSGACG00000013328	ALYREF	98	54.902	ENSMLUG00000024447	-	65	58.247	Myotis_lucifugus
ENSGACG00000013328	ALYREF	100	72.556	ENSNLEG00000010313	ALYREF	97	70.566	Nomascus_leucogenys
ENSGACG00000013328	ALYREF	53	72.794	ENSMEUG00000002210	ALYREF	59	73.529	Notamacropus_eugenii
ENSGACG00000013328	ALYREF	53	75.000	ENSOPRG00000005551	-	52	75.000	Ochotona_princeps
ENSGACG00000013328	ALYREF	100	69.776	ENSODEG00000008359	ALYREF	100	69.776	Octodon_degus
ENSGACG00000013328	ALYREF	100	78.598	ENSORLG00000012331	ALYREF	100	79.554	Oryzias_latipes
ENSGACG00000013328	ALYREF	86	72.444	ENSOGAG00000012409	ALYREF	76	76.923	Otolemur_garnettii
ENSGACG00000013328	ALYREF	69	79.558	ENSOARG00000017932	ALYREF	69	76.440	Ovis_aries
ENSGACG00000013328	ALYREF	100	71.429	ENSPPRG00000010829	ALYREF	98	70.566	Panthera_pardus
ENSGACG00000013328	ALYREF	66	72.414	ENSPTIG00000006399	ALYREF	67	91.667	Panthera_tigris_altaica
ENSGACG00000013328	ALYREF	100	72.556	ENSPTRG00000009774	ALYREF	97	70.566	Pan_troglodytes
ENSGACG00000013328	ALYREF	100	72.556	ENSPANG00000019265	ALYREF	97	70.566	Papio_anubis
ENSGACG00000013328	ALYREF	52	73.134	ENSPSIG00000017541	ALYREF	98	75.373	Pelodiscus_sinensis
ENSGACG00000013328	ALYREF	100	72.556	ENSPPYG00000008749	ALYREF	97	70.566	Pongo_abelii
ENSGACG00000013328	ALYREF	100	71.321	ENSPCOG00000020874	ALYREF	97	70.943	Propithecus_coquereli
ENSGACG00000013328	ALYREF	100	65.637	ENSPVAG00000017866	ALYREF	69	76.667	Pteropus_vampyrus
ENSGACG00000013328	ALYREF	67	74.302	ENSRNOG00000036687	Alyref	91	74.157	Rattus_norvegicus
ENSGACG00000013328	ALYREF	71	78.261	ENSRBIG00000039651	ALYREF	74	75.956	Rhinopithecus_bieti
ENSGACG00000013328	ALYREF	93	65.863	ENSRROG00000045364	ALYREF	80	72.464	Rhinopithecus_roxellana
ENSGACG00000013328	ALYREF	72	75.936	ENSSHAG00000010459	ALYREF	96	76.471	Sarcophilus_harrisii
ENSGACG00000013328	ALYREF	100	50.883	ENSSDUG00000003992	-	100	54.225	Seriola_dumerili
ENSGACG00000013328	ALYREF	100	51.429	ENSSLDG00000005386	-	100	55.235	Seriola_lalandi_dorsalis
ENSGACG00000013328	ALYREF	100	69.349	ENSSPUG00000004600	ALYREF	100	68.966	Sphenodon_punctatus
ENSGACG00000013328	ALYREF	100	78.102	ENSSPAG00000011178	ALYREF	97	83.212	Stegastes_partitus
ENSGACG00000013328	ALYREF	100	72.075	ENSSSCG00000032655	ALYREF	100	70.833	Sus_scrofa
ENSGACG00000013328	ALYREF	52	72.593	ENSTGUG00000003513	ALYREF	100	70.073	Taeniopygia_guttata
ENSGACG00000013328	ALYREF	100	78.067	ENSTRUG00000008828	ALYREF	100	78.067	Takifugu_rubripes
ENSGACG00000013328	ALYREF	69	78.333	ENSTBEG00000005834	ALYREF	100	78.889	Tupaia_belangeri
ENSGACG00000013328	ALYREF	100	69.925	ENSTTRG00000012275	ALYREF	100	69.057	Tursiops_truncatus
ENSGACG00000013328	ALYREF	69	69.832	ENSUAMG00000016931	ALYREF	66	69.832	Ursus_americanus
ENSGACG00000013328	ALYREF	69	68.715	ENSUMAG00000016384	ALYREF	65	66.480	Ursus_maritimus
ENSGACG00000013328	ALYREF	100	70.992	ENSXETG00000005391	alyref	100	70.611	Xenopus_tropicalis