EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000013329 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
5631 bases
Position
chrgroupVIII:17255045-17260675
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000017616RRM_5PF13893.63.2e-1312
ENSGACP00000017616RRM_5PF13893.63.2e-1322
ENSGACP00000017623RRM_5PF13893.69.8e-1011
ENSGACP00000017616RRM_1PF00076.221.6e-6113
ENSGACP00000017616RRM_1PF00076.221.6e-6123
ENSGACP00000017616RRM_1PF00076.221.6e-6133
ENSGACP00000017623RRM_1PF00076.221.9e-5514
ENSGACP00000017623RRM_1PF00076.221.9e-5524
ENSGACP00000017623RRM_1PF00076.221.9e-5534
ENSGACP00000017623RRM_1PF00076.221.9e-5544
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000017657-1568-ENSGACP00000017623451 (aa)-G3PJ44
ENSGACT00000017650-1577-ENSGACP00000017616355 (aa)-G3PJ37
Gene Model
Click here to download ENSGACG00000013329's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013329's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000013329-8865.455ENSGACG00000011152elavl49762.857
ENSGACG00000013329-7642.857ENSGACG00000004426CELF25046.667
ENSGACG00000013329-6241.333ENSGACG00000014978-6634.722
ENSGACG00000013329-6238.889ENSGACG00000015206cirbpa5538.889
ENSGACG00000013329-8637.931ENSGACG00000003274celf3a9937.931
ENSGACG00000013329-8631.169ENSGACG00000013294-7631.169
ENSGACG00000013329-9463.343ENSGACG00000019484elavl29863.050
ENSGACG00000013329-8883.801ENSGACG00000010657elavl1a9883.489
ENSGACG00000013329-7044.262ENSGACG00000014226celf17244.828
ENSGACG00000013329-8532.450ENSGACG00000007179pabpc45732.450
ENSGACG00000013329-8644.872ENSGACG00000011707celf3b5845.333
ENSGACG00000013329-8831.868ENSGACG00000002792pabpc1l5833.766
ENSGACG00000013329-7546.154ENSGACG00000008752celf45246.667
ENSGACG00000013329-8136.184ENSGACG00000009332rbms2b5236.612
ENSGACG00000013329-5135.052ENSGACG00000005671RBMS15535.052
ENSGACG00000013329-9363.448ENSGACG00000013839elavl39663.103
ENSGACG00000013329-8539.759ENSGACG00000003572pabpc1a5639.744
ENSGACG00000013329-8539.759ENSGACG00000003771pabpc1b6340.506
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000013329-8881.191ENSG00000066044ELAVL19880.878Homo_sapiens
ENSGACG00000013329-9976.552ENSAPOG00000002277elavl1a9976.207Acanthochromis_polyacanthus
ENSGACG00000013329-9994.350ENSAPOG00000001912-9994.350Acanthochromis_polyacanthus
ENSGACG00000013329-9080.247ENSAMEG00000008657ELAVL19679.938Ailuropoda_melanoleuca
ENSGACG00000013329-8992.114ENSACIG00000000511-9892.114Amphilophus_citrinellus
ENSGACG00000013329-9976.552ENSACIG00000018226elavl1a9976.207Amphilophus_citrinellus
ENSGACG00000013329-9976.897ENSAOCG00000020018elavl1a9976.552Amphiprion_ocellaris
ENSGACG00000013329-9994.350ENSAOCG00000023751-9994.350Amphiprion_ocellaris
ENSGACG00000013329-9976.552ENSAPEG00000012830elavl1a9976.207Amphiprion_percula
ENSGACG00000013329-9994.068ENSAPEG00000003694-9895.177Amphiprion_percula
ENSGACG00000013329-9977.931ENSATEG00000007662elavl1a9977.586Anabas_testudineus
ENSGACG00000013329-9986.290ENSATEG00000006741-9986.290Anabas_testudineus
ENSGACG00000013329-8880.564ENSAPLG00000003139ELAVL19880.251Anas_platyrhynchos
ENSGACG00000013329-8878.056ENSANAG00000031135-9877.743Aotus_nancymaae
ENSGACG00000013329-8879.751ENSANAG00000037170-9879.439Aotus_nancymaae
ENSGACG00000013329-6577.698ENSANAG00000027297-9777.698Aotus_nancymaae
ENSGACG00000013329-9990.169ENSACLG00000019504-9990.169Astatotilapia_calliptera
ENSGACG00000013329-9976.552ENSACLG00000009328elavl1a9880.189Astatotilapia_calliptera
ENSGACG00000013329-9974.930ENSAMXG00000031223elavl1a9974.652Astyanax_mexicanus
ENSGACG00000013329-9979.501ENSAMXG00000006391elavl1b9879.224Astyanax_mexicanus
ENSGACG00000013329-8880.878ENSBTAG00000000613ELAVL19880.564Bos_taurus
ENSGACG00000013329-8881.191ENSCJAG00000046587ELAVL19880.878Callithrix_jacchus
ENSGACG00000013329-9159.091ENSCAFG00000024229-9458.712Canis_familiaris
ENSGACG00000013329-9080.247ENSCAFG00000018353-9779.938Canis_familiaris
ENSGACG00000013329-8881.191ENSCAFG00020022841-9880.878Canis_lupus_dingo
ENSGACG00000013329-6676.056ENSCAFG00020026232-9576.056Canis_lupus_dingo
ENSGACG00000013329-8880.878ENSCHIG00000014334ELAVL19880.564Capra_hircus
ENSGACG00000013329-8881.191ENSTSYG00000008248ELAVL19880.878Carlito_syrichta
ENSGACG00000013329-8479.137ENSCAPG00000009014ELAVL19378.777Cavia_aperea
ENSGACG00000013329-8476.792ENSCPOG00000011884ELAVL19876.451Cavia_porcellus
ENSGACG00000013329-8881.191ENSCCAG00000025328ELAVL19880.878Cebus_capucinus
ENSGACG00000013329-8881.191ENSCATG00000032090ELAVL19880.878Cercocebus_atys
ENSGACG00000013329-8881.191ENSCLAG00000007826ELAVL19880.878Chinchilla_lanigera
ENSGACG00000013329-8881.191ENSCSAG00000008155ELAVL19880.878Chlorocebus_sabaeus
ENSGACG00000013329-8479.039ENSCHOG00000002832-9878.603Choloepus_hoffmanni
ENSGACG00000013329-8482.129ENSCHOG00000006810-9881.749Choloepus_hoffmanni
ENSGACG00000013329-7478.571ENSCPBG00000017097ELAVL18878.195Chrysemys_picta_bellii
ENSGACG00000013329-8881.191ENSCANG00000041972ELAVL19880.878Colobus_angolensis_palliatus
ENSGACG00000013329-8881.191ENSCGRG00001013676Elavl19880.878Cricetulus_griseus_chok1gshd
ENSGACG00000013329-8881.191ENSCGRG00000001625Elavl19880.878Cricetulus_griseus_crigri
ENSGACG00000013329-9983.380ENSCSEG00000000688-9983.380Cynoglossus_semilaevis
ENSGACG00000013329-9975.862ENSCSEG00000003608elavl1a9974.828Cynoglossus_semilaevis
ENSGACG00000013329-9978.276ENSCVAG00000017170elavl1a9880.997Cyprinodon_variegatus
ENSGACG00000013329-9985.596ENSCVAG00000016617-9985.596Cyprinodon_variegatus
ENSGACG00000013329-9976.125ENSDARG00000038695elavl1a10094.118Danio_rerio
ENSGACG00000013329-9979.050ENSDARG00000101744elavl1b9880.952Danio_rerio
ENSGACG00000013329-8881.191ENSDNOG00000008797ELAVL19880.878Dasypus_novemcinctus
ENSGACG00000013329-8881.191ENSDORG00000009158Elavl19880.878Dipodomys_ordii
ENSGACG00000013329-8482.129ENSETEG00000012985ELAVL19881.749Echinops_telfairi
ENSGACG00000013329-8880.878ENSEASG00005003790ELAVL19880.564Equus_asinus_asinus
ENSGACG00000013329-8880.878ENSECAG00000019459ELAVL19880.564Equus_caballus
ENSGACG00000013329-9979.076ENSELUG00000003289-9878.261Esox_lucius
ENSGACG00000013329-9976.207ENSELUG00000008024elavl1a9975.862Esox_lucius
ENSGACG00000013329-8880.878ENSFCAG00000034143ELAVL19880.564Felis_catus
ENSGACG00000013329-9071.154ENSFALG00000011725ELAVL19070.879Ficedula_albicollis
ENSGACG00000013329-8881.191ENSFDAG00000021259ELAVL19880.878Fukomys_damarensis
ENSGACG00000013329-8788.961ENSFHEG00000014715-9888.961Fundulus_heteroclitus
ENSGACG00000013329-9978.621ENSFHEG00000015979elavl1a9881.308Fundulus_heteroclitus
ENSGACG00000013329-6180.663ENSGMOG00000014008-10062.821Gadus_morhua
ENSGACG00000013329-8881.875ENSGMOG00000014835elavl1a9881.562Gadus_morhua
ENSGACG00000013329-8880.564ENSGALG00000000726ELAVL19880.251Gallus_gallus
ENSGACG00000013329-9978.276ENSGAFG00000019133elavl1a9977.931Gambusia_affinis
ENSGACG00000013329-8790.584ENSGAFG00000000715-9790.584Gambusia_affinis
ENSGACG00000013329-8881.191ENSGAGG00000024119ELAVL19880.878Gopherus_agassizii
ENSGACG00000013329-8881.191ENSGGOG00000006100ELAVL19880.878Gorilla_gorilla
ENSGACG00000013329-9990.678ENSHBUG00000007503-9990.678Haplochromis_burtoni
ENSGACG00000013329-9976.897ENSHBUG00000007897elavl1a9976.552Haplochromis_burtoni
ENSGACG00000013329-8881.191ENSHGLG00000016101ELAVL19880.878Heterocephalus_glaber_female
ENSGACG00000013329-8764.856ENSHGLG00000008478-9364.856Heterocephalus_glaber_female
ENSGACG00000013329-8881.191ENSHGLG00100007070ELAVL19880.878Heterocephalus_glaber_male
ENSGACG00000013329-8764.856ENSHGLG00100000375-9364.856Heterocephalus_glaber_male
ENSGACG00000013329-9972.414ENSHCOG00000015240elavl1a9971.724Hippocampus_comes
ENSGACG00000013329-9985.311ENSHCOG00000020439-9984.746Hippocampus_comes
ENSGACG00000013329-9976.552ENSIPUG00000014082elavl1a9976.207Ictalurus_punctatus
ENSGACG00000013329-9977.624ENSIPUG00000015781elavl1b9977.348Ictalurus_punctatus
ENSGACG00000013329-8881.191ENSSTOG00000009130ELAVL19880.878Ictidomys_tridecemlineatus
ENSGACG00000013329-8881.191ENSJJAG00000015838Elavl19880.878Jaculus_jaculus
ENSGACG00000013329-9977.931ENSKMAG00000014042elavl1a9977.586Kryptolebias_marmoratus
ENSGACG00000013329-8790.968ENSKMAG00000006259-9790.968Kryptolebias_marmoratus
ENSGACG00000013329-9977.586ENSLBEG00000021924elavl1a9977.241Labrus_bergylta
ENSGACG00000013329-9992.157ENSLBEG00000028513-9992.157Labrus_bergylta
ENSGACG00000013329-8878.683ENSLACG00000017607ELAVL19877.882Latimeria_chalumnae
ENSGACG00000013329-9977.509ENSLOCG00000000284elavl1b9977.163Lepisosteus_oculatus
ENSGACG00000013329-8881.191ENSLAFG00000004219ELAVL19880.878Loxodonta_africana
ENSGACG00000013329-8881.191ENSMFAG00000040787ELAVL19880.878Macaca_fascicularis
ENSGACG00000013329-8881.191ENSMMUG00000006544ELAVL19880.878Macaca_mulatta
ENSGACG00000013329-8881.191ENSMNEG00000028431ELAVL19880.878Macaca_nemestrina
ENSGACG00000013329-8881.191ENSMLEG00000037227ELAVL19880.878Mandrillus_leucophaeus
ENSGACG00000013329-9976.897ENSMAMG00000002385elavl1a9975.862Mastacembelus_armatus
ENSGACG00000013329-9992.938ENSMAMG00000006701-9992.938Mastacembelus_armatus
ENSGACG00000013329-9984.814ENSMZEG00005020888-9584.814Maylandia_zebra
ENSGACG00000013329-9976.552ENSMZEG00005015772elavl1a9976.207Maylandia_zebra
ENSGACG00000013329-9986.158ENSMZEG00005020865-9892.532Maylandia_zebra
ENSGACG00000013329-8481.509ENSMGAG00000001015ELAVL19881.132Meleagris_gallopavo
ENSGACG00000013329-8881.191ENSMAUG00000000924Elavl19880.878Mesocricetus_auratus
ENSGACG00000013329-8881.191ENSMICG00000009699ELAVL19880.878Microcebus_murinus
ENSGACG00000013329-8881.191ENSMOCG00000014588Elavl19880.878Microtus_ochrogaster
ENSGACG00000013329-8793.831ENSMMOG00000008014-9793.831Mola_mola
ENSGACG00000013329-8881.132ENSMMOG00000011938elavl1a9880.189Mola_mola
ENSGACG00000013329-8881.191ENSMODG00000005041ELAVL18180.878Monodelphis_domestica
ENSGACG00000013329-9977.931ENSMALG00000010070elavl1a9880.997Monopterus_albus
ENSGACG00000013329-9991.808ENSMALG00000021265-9991.808Monopterus_albus
ENSGACG00000013329-8881.191MGP_CAROLIEiJ_G0030798Elavl19880.878Mus_caroli
ENSGACG00000013329-8881.191ENSMUSG00000040028Elavl19880.878Mus_musculus
ENSGACG00000013329-8881.191MGP_PahariEiJ_G0021261Elavl19880.878Mus_pahari
ENSGACG00000013329-8881.191MGP_SPRETEiJ_G0031906Elavl19880.878Mus_spretus
ENSGACG00000013329-8881.191ENSMPUG00000007991ELAVL19880.878Mustela_putorius_furo
ENSGACG00000013329-9059.443ENSMLUG00000030062-9259.133Myotis_lucifugus
ENSGACG00000013329-9079.938ENSMLUG00000008101-9679.630Myotis_lucifugus
ENSGACG00000013329-8881.191ENSNGAG00000019590Elavl19880.878Nannospalax_galili
ENSGACG00000013329-9986.158ENSNBRG00000006218-9986.158Neolamprologus_brichardi
ENSGACG00000013329-9976.552ENSNBRG00000021290elavl1a9976.207Neolamprologus_brichardi
ENSGACG00000013329-8880.878ENSNLEG00000001325ELAVL19880.251Nomascus_leucogenys
ENSGACG00000013329-8868.025ENSMEUG00000010702-9867.712Notamacropus_eugenii
ENSGACG00000013329-8880.564ENSOPRG00000009691-9880.251Ochotona_princeps
ENSGACG00000013329-8881.191ENSODEG00000012189ELAVL19880.878Octodon_degus
ENSGACG00000013329-9179.939ENSONIG00000001096elavl1a9479.635Oreochromis_niloticus
ENSGACG00000013329-9990.678ENSONIG00000003197-9990.678Oreochromis_niloticus
ENSGACG00000013329-6879.021ENSOANG00000022373-9678.571Ornithorhynchus_anatinus
ENSGACG00000013329-7077.083ENSOANG00000014244ELAVL19876.804Ornithorhynchus_anatinus
ENSGACG00000013329-9079.630ENSOCUG00000015871ELAVL17879.321Oryctolagus_cuniculus
ENSGACG00000013329-9977.241ENSORLG00000012435elavl1a9976.552Oryzias_latipes
ENSGACG00000013329-9988.983ENSORLG00000000087-9988.983Oryzias_latipes
ENSGACG00000013329-9977.241ENSORLG00020019326elavl1a9976.552Oryzias_latipes_hni
ENSGACG00000013329-9988.983ENSORLG00020012447-9988.983Oryzias_latipes_hni
ENSGACG00000013329-9977.241ENSORLG00015016801elavl1a9976.552Oryzias_latipes_hsok
ENSGACG00000013329-9988.983ENSORLG00015008332-9988.983Oryzias_latipes_hsok
ENSGACG00000013329-9988.983ENSOMEG00000015322-9988.983Oryzias_melastigma
ENSGACG00000013329-9977.241ENSOMEG00000015457elavl1a9976.552Oryzias_melastigma
ENSGACG00000013329-8881.191ENSOGAG00000012877ELAVL19880.878Otolemur_garnettii
ENSGACG00000013329-8880.878ENSOARG00000003168ELAVL19480.564Ovis_aries
ENSGACG00000013329-8881.191ENSPPAG00000035262ELAVL19880.878Pan_paniscus
ENSGACG00000013329-8880.878ENSPPRG00000002521ELAVL19880.564Panthera_pardus
ENSGACG00000013329-8880.878ENSPTIG00000013602ELAVL19880.564Panthera_tigris_altaica
ENSGACG00000013329-8881.191ENSPTRG00000010413ELAVL19880.878Pan_troglodytes
ENSGACG00000013329-8881.191ENSPANG00000025878ELAVL19880.878Papio_anubis
ENSGACG00000013329-9981.492ENSPKIG00000003894ELAVL19981.215Paramormyrops_kingsleyae
ENSGACG00000013329-9978.547ENSPKIG00000023897-9977.855Paramormyrops_kingsleyae
ENSGACG00000013329-8881.191ENSPSIG00000013736ELAVL19880.878Pelodiscus_sinensis
ENSGACG00000013329-8877.429ENSPMGG00000015849elavl1a9877.116Periophthalmus_magnuspinnatus
ENSGACG00000013329-8881.013ENSPMGG00000015593-9780.380Periophthalmus_magnuspinnatus
ENSGACG00000013329-9988.169ENSPFOG00000009739ELAVL19988.169Poecilia_formosa
ENSGACG00000013329-9977.931ENSPFOG00000014116elavl1a9977.586Poecilia_formosa
ENSGACG00000013329-8790.584ENSPLAG00000020810ELAVL19890.584Poecilia_latipinna
ENSGACG00000013329-9977.931ENSPLAG00000008127elavl1a9977.586Poecilia_latipinna
ENSGACG00000013329-9977.931ENSPMEG00000002868elavl1a9977.586Poecilia_mexicana
ENSGACG00000013329-9988.169ENSPMEG00000000283ELAVL19890.584Poecilia_mexicana
ENSGACG00000013329-9978.276ENSPREG00000011054elavl1a9977.931Poecilia_reticulata
ENSGACG00000013329-9988.451ENSPREG00000005877-9790.909Poecilia_reticulata
ENSGACG00000013329-8881.191ENSPPYG00000009496ELAVL19880.878Pongo_abelii
ENSGACG00000013329-8482.129ENSPCAG00000016012ELAVL19881.749Procavia_capensis
ENSGACG00000013329-8881.191ENSPCOG00000003300ELAVL19880.878Propithecus_coquereli
ENSGACG00000013329-9077.366ENSPVAG00000002299ELAVL19876.955Pteropus_vampyrus
ENSGACG00000013329-9990.678ENSPNYG00000013107-9990.678Pundamilia_nyererei
ENSGACG00000013329-9976.552ENSPNYG00000012769elavl1a9976.207Pundamilia_nyererei
ENSGACG00000013329-9975.087ENSPNAG00000010909elavl1a9877.982Pygocentrus_nattereri
ENSGACG00000013329-9980.663ENSPNAG00000024381elavl1b9980.387Pygocentrus_nattereri
ENSGACG00000013329-8881.191ENSRNOG00000001069Elavl19880.878Rattus_norvegicus
ENSGACG00000013329-8778.981ENSRBIG00000032339-9478.662Rhinopithecus_bieti
ENSGACG00000013329-8881.191ENSRROG00000037769ELAVL19880.878Rhinopithecus_roxellana
ENSGACG00000013329-8881.191ENSSBOG00000028871ELAVL19880.878Saimiri_boliviensis_boliviensis
ENSGACG00000013329-8881.191ENSSHAG00000008109ELAVL19880.878Sarcophilus_harrisii
ENSGACG00000013329-9976.817ENSSFOG00015017503-9976.471Scleropages_formosus
ENSGACG00000013329-9979.076ENSSFOG00015021786ELAVL19978.804Scleropages_formosus
ENSGACG00000013329-9991.808ENSSMAG00000014353-9991.808Scophthalmus_maximus
ENSGACG00000013329-9976.552ENSSMAG00000014763elavl1a9976.552Scophthalmus_maximus
ENSGACG00000013329-9976.552ENSSDUG00000012465elavl1a9975.862Seriola_dumerili
ENSGACG00000013329-9994.350ENSSDUG00000015257-9994.350Seriola_dumerili
ENSGACG00000013329-9976.552ENSSLDG00000022499elavl1a9975.862Seriola_lalandi_dorsalis
ENSGACG00000013329-9994.350ENSSLDG00000019362-9994.350Seriola_lalandi_dorsalis
ENSGACG00000013329-8868.339ENSSARG00000013091ELAVL19868.025Sorex_araneus
ENSGACG00000013329-8880.878ENSSPUG00000002077ELAVL19880.564Sphenodon_punctatus
ENSGACG00000013329-9994.068ENSSPAG00000011250-9994.068Stegastes_partitus
ENSGACG00000013329-9977.241ENSSPAG00000013543elavl1a9976.552Stegastes_partitus
ENSGACG00000013329-8879.937ENSSSCG00000013592ELAVL19879.624Sus_scrofa
ENSGACG00000013329-8880.564ENSTGUG00000000118ELAVL19880.251Taeniopygia_guttata
ENSGACG00000013329-9078.086ENSTRUG00000023704elavl1a9577.160Takifugu_rubripes
ENSGACG00000013329-9987.288ENSTRUG00000007296-9987.288Takifugu_rubripes
ENSGACG00000013329-9184.937ENSTNIG00000004733-9984.937Tetraodon_nigroviridis
ENSGACG00000013329-8878.997ENSTNIG00000019823elavl1a9878.056Tetraodon_nigroviridis
ENSGACG00000013329-6694.737ENSTBEG00000015038ELAVL17494.737Tupaia_belangeri
ENSGACG00000013329-8871.473ENSTTRG00000010180ELAVL19871.160Tursiops_truncatus
ENSGACG00000013329-9080.247ENSUAMG00000022313ELAVL19479.938Ursus_americanus
ENSGACG00000013329-9080.247ENSUMAG00000014798ELAVL19479.938Ursus_maritimus
ENSGACG00000013329-7953.992ENSVPAG00000005777-7985.294Vicugna_pacos
ENSGACG00000013329-9080.247ENSVVUG00000026988-9379.938Vulpes_vulpes
ENSGACG00000013329-8480.258ENSVVUG00000003187-8679.828Vulpes_vulpes
ENSGACG00000013329-9257.692ENSVVUG00000025910-8057.692Vulpes_vulpes
ENSGACG00000013329-8880.564ENSXETG00000008752elavl19880.251Xenopus_tropicalis
ENSGACG00000013329-7093.077ENSXCOG00000008068-9795.745Xiphophorus_couchianus
ENSGACG00000013329-8882.390ENSXCOG00000014236elavl1a9882.075Xiphophorus_couchianus
ENSGACG00000013329-9978.621ENSXMAG00000009362elavl1a9978.276Xiphophorus_maculatus
ENSGACG00000013329-9988.169ENSXMAG00000030088-9988.169Xiphophorus_maculatus

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