EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013400 (Gene tree)
Gene ID: -
Gene Symbol: sb:cb81
Alias: LOC100334443|cb81
Full Name: sb:cb81
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1032 bases
Position: chrgroupI:17460083-17461114
Accession: ZDB-GENE-030131-9939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017708	zf-CCCH	PF00642.24	5.1e-23	1	2
ENSGACP00000017708	zf-CCCH	PF00642.24	5.1e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017743	-	996	-	ENSGACP00000017708	331 (aa)	-	G3PJC9

Gene Model

Click here to download ENSGACG00000013400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013400	sb:cb81	80	40.418	ENSGACG00000008351	zgc:162730	100	34.743

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013400	sb:cb81	99	37.566	ENSAPOG00000014920	zgc:162730	83	36.685	Acanthochromis_polyacanthus
ENSGACG00000013400	sb:cb81	98	70.427	ENSAPOG00000011209	sb:cb81	84	68.935	Acanthochromis_polyacanthus
ENSGACG00000013400	sb:cb81	69	41.453	ENSACIG00000017366	zgc:162730	96	40.000	Amphilophus_citrinellus
ENSGACG00000013400	sb:cb81	100	76.522	ENSACIG00000009027	sb:cb81	81	76.522	Amphilophus_citrinellus
ENSGACG00000013400	sb:cb81	78	42.403	ENSAOCG00000022227	zgc:114130	76	39.942	Amphiprion_ocellaris
ENSGACG00000013400	sb:cb81	99	38.978	ENSAOCG00000002001	zgc:162730	83	35.356	Amphiprion_ocellaris
ENSGACG00000013400	sb:cb81	98	70.695	ENSAOCG00000024158	sb:cb81	80	69.733	Amphiprion_ocellaris
ENSGACG00000013400	sb:cb81	78	43.299	ENSAPEG00000015497	zgc:114130	76	40.456	Amphiprion_percula
ENSGACG00000013400	sb:cb81	99	38.978	ENSAPEG00000015490	zgc:162730	87	37.197	Amphiprion_percula
ENSGACG00000013400	sb:cb81	98	70.427	ENSAPEG00000022405	sb:cb81	80	70.030	Amphiprion_percula
ENSGACG00000013400	sb:cb81	100	75.362	ENSATEG00000003462	sb:cb81	81	75.362	Anabas_testudineus
ENSGACG00000013400	sb:cb81	78	44.737	ENSATEG00000014086	zfp36l1b	61	42.593	Anabas_testudineus
ENSGACG00000013400	sb:cb81	61	45.064	ENSATEG00000008781	zgc:114130	50	47.345	Anabas_testudineus
ENSGACG00000013400	sb:cb81	82	40.000	ENSATEG00000008790	zgc:162730	80	36.000	Anabas_testudineus
ENSGACG00000013400	sb:cb81	99	74.344	ENSACLG00000013759	sb:cb81	81	74.344	Astatotilapia_calliptera
ENSGACG00000013400	sb:cb81	99	53.644	ENSAMXG00000034874	sb:cb81	82	52.589	Astyanax_mexicanus
ENSGACG00000013400	sb:cb81	99	41.643	ENSAMXG00000038581	zgc:114130	80	41.972	Astyanax_mexicanus
ENSGACG00000013400	sb:cb81	99	37.931	ENSCSEG00000018283	zgc:162730	97	41.667	Cynoglossus_semilaevis
ENSGACG00000013400	sb:cb81	100	69.429	ENSCSEG00000014426	sb:cb81	69	70.085	Cynoglossus_semilaevis
ENSGACG00000013400	sb:cb81	100	68.786	ENSCVAG00000009207	sb:cb81	82	69.075	Cyprinodon_variegatus
ENSGACG00000013400	sb:cb81	98	38.889	ENSCVAG00000018571	zgc:162730	82	38.950	Cyprinodon_variegatus
ENSGACG00000013400	sb:cb81	100	56.069	ENSDARG00000040503	sb:cb81	82	55.425	Danio_rerio
ENSGACG00000013400	sb:cb81	94	40.439	ENSDARG00000103720	zgc:162730	84	38.291	Danio_rerio
ENSGACG00000013400	sb:cb81	78	45.487	ENSDARG00000016154	zfp36l1a	72	40.317	Danio_rerio
ENSGACG00000013400	sb:cb81	98	42.814	ENSDARG00000040725	zgc:114130	78	44.083	Danio_rerio
ENSGACG00000013400	sb:cb81	99	58.407	ENSELUG00000013045	sb:cb81	80	57.018	Esox_lucius
ENSGACG00000013400	sb:cb81	99	43.149	ENSELUG00000013151	zgc:114130	78	42.274	Esox_lucius
ENSGACG00000013400	sb:cb81	99	38.439	ENSELUG00000013158	zgc:162730	87	35.965	Esox_lucius
ENSGACG00000013400	sb:cb81	52	44.000	ENSFHEG00000000656	zgc:114130	76	38.554	Fundulus_heteroclitus
ENSGACG00000013400	sb:cb81	97	39.227	ENSFHEG00000013710	zgc:162730	83	39.178	Fundulus_heteroclitus
ENSGACG00000013400	sb:cb81	100	72.701	ENSFHEG00000022187	sb:cb81	82	72.701	Fundulus_heteroclitus
ENSGACG00000013400	sb:cb81	94	41.587	ENSGMOG00000017223	zgc:114130	97	43.038	Gadus_morhua
ENSGACG00000013400	sb:cb81	94	35.860	ENSGMOG00000017242	zgc:162730	100	35.088	Gadus_morhua
ENSGACG00000013400	sb:cb81	79	63.019	ENSGMOG00000016803	sb:cb81	100	60.959	Gadus_morhua
ENSGACG00000013400	sb:cb81	99	68.788	ENSGAFG00000015700	sb:cb81	79	68.788	Gambusia_affinis
ENSGACG00000013400	sb:cb81	95	38.398	ENSGAFG00000009953	zgc:162730	83	38.667	Gambusia_affinis
ENSGACG00000013400	sb:cb81	99	72.832	ENSHBUG00000002383	sb:cb81	81	74.855	Haplochromis_burtoni
ENSGACG00000013400	sb:cb81	98	37.795	ENSHCOG00000015801	zgc:162730	83	34.127	Hippocampus_comes
ENSGACG00000013400	sb:cb81	98	50.959	ENSHCOG00000000792	sb:cb81	80	51.213	Hippocampus_comes
ENSGACG00000013400	sb:cb81	78	42.754	ENSHCOG00000013932	zfp36l1a	65	41.241	Hippocampus_comes
ENSGACG00000013400	sb:cb81	99	51.929	ENSIPUG00000011378	sb:cb81	80	51.929	Ictalurus_punctatus
ENSGACG00000013400	sb:cb81	94	40.062	ENSIPUG00000018248	zgc:162730	81	38.318	Ictalurus_punctatus
ENSGACG00000013400	sb:cb81	93	42.089	ENSKMAG00000013156	zfp36l1a	76	39.450	Kryptolebias_marmoratus
ENSGACG00000013400	sb:cb81	98	36.170	ENSKMAG00000019277	zgc:162730	83	35.638	Kryptolebias_marmoratus
ENSGACG00000013400	sb:cb81	100	72.674	ENSKMAG00000009884	sb:cb81	80	72.674	Kryptolebias_marmoratus
ENSGACG00000013400	sb:cb81	100	68.286	ENSLBEG00000018376	sb:cb81	79	68.661	Labrus_bergylta
ENSGACG00000013400	sb:cb81	80	40.956	ENSLBEG00000018380	zgc:162730	79	38.596	Labrus_bergylta
ENSGACG00000013400	sb:cb81	78	43.581	ENSLACG00000012879	-	68	43.554	Latimeria_chalumnae
ENSGACG00000013400	sb:cb81	98	54.627	ENSLACG00000015732	sb:cb81	80	53.134	Latimeria_chalumnae
ENSGACG00000013400	sb:cb81	99	57.895	ENSLOCG00000014587	sb:cb81	81	57.225	Lepisosteus_oculatus
ENSGACG00000013400	sb:cb81	99	39.222	ENSLOCG00000014597	zgc:162730	84	38.623	Lepisosteus_oculatus
ENSGACG00000013400	sb:cb81	100	74.566	ENSMAMG00000020144	sb:cb81	73	75.434	Mastacembelus_armatus
ENSGACG00000013400	sb:cb81	99	37.940	ENSMAMG00000007516	zgc:162730	82	36.538	Mastacembelus_armatus
ENSGACG00000013400	sb:cb81	61	43.981	ENSMZEG00005014415	zgc:162730	82	38.166	Maylandia_zebra
ENSGACG00000013400	sb:cb81	99	73.761	ENSMZEG00005024684	sb:cb81	80	73.761	Maylandia_zebra
ENSGACG00000013400	sb:cb81	99	73.977	ENSMZEG00005016001	-	80	73.977	Maylandia_zebra
ENSGACG00000013400	sb:cb81	91	72.517	ENSMMOG00000010073	sb:cb81	76	72.848	Mola_mola
ENSGACG00000013400	sb:cb81	62	47.727	ENSMMOG00000011504	zgc:114130	54	49.495	Mola_mola
ENSGACG00000013400	sb:cb81	70	38.710	ENSMMOG00000011506	zgc:162730	99	37.551	Mola_mola
ENSGACG00000013400	sb:cb81	78	65.637	ENSMALG00000021140	-	96	65.891	Monopterus_albus
ENSGACG00000013400	sb:cb81	78	43.846	ENSMALG00000016768	zfp36l1b	61	42.424	Monopterus_albus
ENSGACG00000013400	sb:cb81	99	37.265	ENSMALG00000002348	zgc:162730	83	37.466	Monopterus_albus
ENSGACG00000013400	sb:cb81	99	73.636	ENSNBRG00000006231	sb:cb81	79	74.545	Neolamprologus_brichardi
ENSGACG00000013400	sb:cb81	63	44.393	ENSNBRG00000013703	zgc:114130	96	39.244	Neolamprologus_brichardi
ENSGACG00000013400	sb:cb81	99	72.254	ENSONIG00000001259	sb:cb81	81	74.566	Oreochromis_niloticus
ENSGACG00000013400	sb:cb81	61	46.078	ENSONIG00000005003	zgc:162730	97	40.673	Oreochromis_niloticus
ENSGACG00000013400	sb:cb81	100	65.766	ENSORLG00000024026	sb:cb81	70	65.465	Oryzias_latipes
ENSGACG00000013400	sb:cb81	100	65.766	ENSORLG00020021084	sb:cb81	81	66.366	Oryzias_latipes_hni
ENSGACG00000013400	sb:cb81	100	65.179	ENSORLG00015010105	sb:cb81	81	65.060	Oryzias_latipes_hsok
ENSGACG00000013400	sb:cb81	97	37.600	ENSOMEG00000017752	zgc:162730	82	36.339	Oryzias_melastigma
ENSGACG00000013400	sb:cb81	100	66.964	ENSOMEG00000020565	sb:cb81	81	66.964	Oryzias_melastigma
ENSGACG00000013400	sb:cb81	80	37.363	ENSOARG00000021177	ZFP36L1	75	36.996	Ovis_aries
ENSGACG00000013400	sb:cb81	82	50.000	ENSPMGG00000009232	sb:cb81	84	47.203	Periophthalmus_magnuspinnatus
ENSGACG00000013400	sb:cb81	96	41.867	ENSPMGG00000000442	zfp36l1a	69	43.071	Periophthalmus_magnuspinnatus
ENSGACG00000013400	sb:cb81	98	37.429	ENSPFOG00000003665	zgc:162730	100	39.205	Poecilia_formosa
ENSGACG00000013400	sb:cb81	100	69.789	ENSPFOG00000013806	sb:cb81	79	69.789	Poecilia_formosa
ENSGACG00000013400	sb:cb81	100	69.486	ENSPLAG00000020158	sb:cb81	87	69.486	Poecilia_latipinna
ENSGACG00000013400	sb:cb81	97	36.872	ENSPLAG00000000946	zgc:162730	83	38.338	Poecilia_latipinna
ENSGACG00000013400	sb:cb81	97	37.709	ENSPMEG00000000341	zgc:162730	83	38.874	Poecilia_mexicana
ENSGACG00000013400	sb:cb81	100	69.789	ENSPMEG00000022425	sb:cb81	79	69.789	Poecilia_mexicana
ENSGACG00000013400	sb:cb81	100	66.766	ENSPREG00000017495	sb:cb81	80	68.563	Poecilia_reticulata
ENSGACG00000013400	sb:cb81	97	37.151	ENSPREG00000021263	zgc:162730	83	38.606	Poecilia_reticulata
ENSGACG00000013400	sb:cb81	99	75.227	ENSPNYG00000007502	sb:cb81	80	76.133	Pundamilia_nyererei
ENSGACG00000013400	sb:cb81	93	40.063	ENSPNYG00000004953	zfp36l1a	76	38.095	Pundamilia_nyererei
ENSGACG00000013400	sb:cb81	99	38.920	ENSPNAG00000023029	zgc:114130	81	39.205	Pygocentrus_nattereri
ENSGACG00000013400	sb:cb81	97	59.816	ENSPNAG00000030063	sb:cb81	79	58.788	Pygocentrus_nattereri
ENSGACG00000013400	sb:cb81	98	45.697	ENSSFOG00015003179	sb:cb81	78	45.058	Scleropages_formosus
ENSGACG00000013400	sb:cb81	68	74.459	ENSSMAG00000004403	sb:cb81	94	75.758	Scophthalmus_maximus
ENSGACG00000013400	sb:cb81	78	40.273	ENSSMAG00000018612	zgc:162730	83	36.022	Scophthalmus_maximus
ENSGACG00000013400	sb:cb81	98	39.884	ENSSDUG00000002247	zgc:162730	84	37.027	Seriola_dumerili
ENSGACG00000013400	sb:cb81	99	78.551	ENSSDUG00000004426	sb:cb81	79	78.963	Seriola_dumerili
ENSGACG00000013400	sb:cb81	98	39.306	ENSSLDG00000008502	zgc:162730	84	37.297	Seriola_lalandi_dorsalis
ENSGACG00000013400	sb:cb81	99	78.841	ENSSLDG00000018035	sb:cb81	80	79.251	Seriola_lalandi_dorsalis
ENSGACG00000013400	sb:cb81	94	38.872	ENSSPAG00000006856	zgc:114130	76	39.710	Stegastes_partitus
ENSGACG00000013400	sb:cb81	99	36.870	ENSSPAG00000006851	zgc:162730	83	35.372	Stegastes_partitus
ENSGACG00000013400	sb:cb81	100	69.855	ENSSPAG00000013546	sb:cb81	83	71.594	Stegastes_partitus
ENSGACG00000013400	sb:cb81	100	69.162	ENSTRUG00000020720	sb:cb81	81	69.461	Takifugu_rubripes
ENSGACG00000013400	sb:cb81	82	43.189	ENSTRUG00000021229	zgc:162730	83	39.276	Takifugu_rubripes
ENSGACG00000013400	sb:cb81	79	44.286	ENSTNIG00000000183	zgc:162730	84	40.351	Tetraodon_nigroviridis
ENSGACG00000013400	sb:cb81	96	66.770	ENSTNIG00000019802	sb:cb81	94	67.081	Tetraodon_nigroviridis
ENSGACG00000013400	sb:cb81	73	68.724	ENSXCOG00000010688	sb:cb81	86	68.724	Xiphophorus_couchianus
ENSGACG00000013400	sb:cb81	95	39.216	ENSXCOG00000012791	zgc:162730	83	39.459	Xiphophorus_couchianus
ENSGACG00000013400	sb:cb81	95	39.216	ENSXMAG00000018206	zgc:162730	83	39.459	Xiphophorus_maculatus
ENSGACG00000013400	sb:cb81	100	69.184	ENSXMAG00000004681	sb:cb81	79	69.184	Xiphophorus_maculatus