EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000013427 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-21k16.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5181 bases
Position: chrgroupXVIII:15729961-15735141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017751	G-patch	PF01585.23	8.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017786	-	1589	-	ENSGACP00000017751	507 (aa)	-	G3PJH1
ENSGACT00000017790	-	1249	-	ENSGACP00000017755	386 (aa)	-	G3PJH5

Gene Model

Click here to download ENSGACG00000013427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013427	si:ch73-21k16.4	100	56.121	ENSG00000092978	GPATCH2	97	54.991	Homo_sapiens
ENSGACG00000013427	si:ch73-21k16.4	100	55.722	ENSAMEG00000000532	GPATCH2	97	54.784	Ailuropoda_melanoleuca
ENSGACG00000013427	si:ch73-21k16.4	100	77.547	ENSACIG00000017628	si:ch73-21k16.4	99	77.736	Amphilophus_citrinellus
ENSGACG00000013427	si:ch73-21k16.4	96	78.000	ENSAOCG00000020838	si:ch73-21k16.4	99	78.000	Amphiprion_ocellaris
ENSGACG00000013427	si:ch73-21k16.4	100	86.122	ENSAPEG00000007324	si:ch73-21k16.4	99	86.122	Amphiprion_percula
ENSGACG00000013427	si:ch73-21k16.4	100	76.381	ENSATEG00000003701	si:ch73-21k16.4	99	76.381	Anabas_testudineus
ENSGACG00000013427	si:ch73-21k16.4	97	56.751	ENSAPLG00000005559	GPATCH2	99	55.796	Anas_platyrhynchos
ENSGACG00000013427	si:ch73-21k16.4	98	55.877	ENSACAG00000014945	GPATCH2	92	54.913	Anolis_carolinensis
ENSGACG00000013427	si:ch73-21k16.4	100	56.121	ENSANAG00000032851	GPATCH2	97	54.991	Aotus_nancymaae
ENSGACG00000013427	si:ch73-21k16.4	100	84.369	ENSACLG00000008706	si:ch73-21k16.4	99	84.369	Astatotilapia_calliptera
ENSGACG00000013427	si:ch73-21k16.4	100	70.722	ENSAMXG00000001662	si:ch73-21k16.4	99	70.722	Astyanax_mexicanus
ENSGACG00000013427	si:ch73-21k16.4	100	56.075	ENSBTAG00000001574	GPATCH2	97	54.953	Bos_taurus
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSCJAG00000047537	GPATCH2	88	55.179	Callithrix_jacchus
ENSGACG00000013427	si:ch73-21k16.4	100	55.722	ENSCAFG00000010781	GPATCH2	97	54.597	Canis_familiaris
ENSGACG00000013427	si:ch73-21k16.4	100	56.075	ENSCHIG00000018042	GPATCH2	97	54.953	Capra_hircus
ENSGACG00000013427	si:ch73-21k16.4	97	56.641	ENSCAPG00000007843	GPATCH2	96	55.469	Cavia_aperea
ENSGACG00000013427	si:ch73-21k16.4	100	56.121	ENSCPOG00000003966	GPATCH2	97	54.991	Cavia_porcellus
ENSGACG00000013427	si:ch73-21k16.4	100	56.497	ENSCCAG00000010195	GPATCH2	97	55.367	Cebus_capucinus
ENSGACG00000013427	si:ch73-21k16.4	100	57.033	ENSCATG00000038238	GPATCH2	96	55.877	Cercocebus_atys
ENSGACG00000013427	si:ch73-21k16.4	100	54.749	ENSCLAG00000009274	GPATCH2	97	54.991	Chinchilla_lanigera
ENSGACG00000013427	si:ch73-21k16.4	100	56.415	ENSCPBG00000013037	GPATCH2	99	55.283	Chrysemys_picta_bellii
ENSGACG00000013427	si:ch73-21k16.4	100	55.932	ENSCANG00000031261	GPATCH2	97	54.802	Colobus_angolensis_palliatus
ENSGACG00000013427	si:ch73-21k16.4	97	57.115	ENSCGRG00001024577	Gpatch2	97	55.556	Cricetulus_griseus_chok1gshd
ENSGACG00000013427	si:ch73-21k16.4	97	57.115	ENSCGRG00000015039	Gpatch2	96	55.945	Cricetulus_griseus_crigri
ENSGACG00000013427	si:ch73-21k16.4	100	82.319	ENSCSEG00000002545	si:ch73-21k16.4	99	82.319	Cynoglossus_semilaevis
ENSGACG00000013427	si:ch73-21k16.4	100	81.544	ENSCVAG00000006306	si:ch73-21k16.4	99	81.544	Cyprinodon_variegatus
ENSGACG00000013427	si:ch73-21k16.4	100	72.287	ENSDARG00000101260	GPATCH2	99	72.287	Danio_rerio
ENSGACG00000013427	si:ch73-21k16.4	51	61.232	ENSDNOG00000000826	GPATCH2	94	61.232	Dasypus_novemcinctus
ENSGACG00000013427	si:ch73-21k16.4	97	57.310	ENSDORG00000030155	Gpatch2	96	56.335	Dipodomys_ordii
ENSGACG00000013427	si:ch73-21k16.4	100	52.919	ENSETEG00000012316	GPATCH2	97	52.542	Echinops_telfairi
ENSGACG00000013427	si:ch73-21k16.4	79	40.961	ENSEBUG00000014275	si:ch73-21k16.4	77	42.155	Eptatretus_burgeri
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSEASG00005003507	GPATCH2	97	55.179	Equus_asinus_asinus
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSECAG00000013263	GPATCH2	97	55.179	Equus_caballus
ENSGACG00000013427	si:ch73-21k16.4	96	55.294	ENSEEUG00000008748	GPATCH2	96	55.078	Erinaceus_europaeus
ENSGACG00000013427	si:ch73-21k16.4	100	77.376	ENSELUG00000004934	si:ch73-21k16.4	99	77.757	Esox_lucius
ENSGACG00000013427	si:ch73-21k16.4	100	56.415	ENSFCAG00000007129	GPATCH2	96	55.283	Felis_catus
ENSGACG00000013427	si:ch73-21k16.4	100	54.104	ENSFALG00000012223	GPATCH2	99	54.511	Ficedula_albicollis
ENSGACG00000013427	si:ch73-21k16.4	96	55.030	ENSFDAG00000011026	GPATCH2	96	53.846	Fukomys_damarensis
ENSGACG00000013427	si:ch73-21k16.4	83	87.248	ENSFHEG00000008699	si:ch73-21k16.4	92	90.604	Fundulus_heteroclitus
ENSGACG00000013427	si:ch73-21k16.4	84	92.248	ENSGMOG00000001595	si:ch73-21k16.4	82	92.248	Gadus_morhua
ENSGACG00000013427	si:ch73-21k16.4	100	56.250	ENSGALG00000009627	GPATCH2	99	55.114	Gallus_gallus
ENSGACG00000013427	si:ch73-21k16.4	100	81.733	ENSGAFG00000005041	si:ch73-21k16.4	99	81.733	Gambusia_affinis
ENSGACG00000013427	si:ch73-21k16.4	100	56.226	ENSGAGG00000013122	GPATCH2	99	55.094	Gopherus_agassizii
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSGGOG00000009440	GPATCH2	97	55.179	Gorilla_gorilla
ENSGACG00000013427	si:ch73-21k16.4	100	84.369	ENSHBUG00000014399	si:ch73-21k16.4	99	84.369	Haplochromis_burtoni
ENSGACG00000013427	si:ch73-21k16.4	100	56.497	ENSHGLG00000019513	GPATCH2	97	55.367	Heterocephalus_glaber_female
ENSGACG00000013427	si:ch73-21k16.4	100	56.497	ENSHGLG00100003689	GPATCH2	97	55.367	Heterocephalus_glaber_male
ENSGACG00000013427	si:ch73-21k16.4	100	71.260	ENSHCOG00000011331	si:ch73-21k16.4	99	71.850	Hippocampus_comes
ENSGACG00000013427	si:ch73-21k16.4	100	58.221	ENSIPUG00000012840	si:ch73-21k16.4	99	58.221	Ictalurus_punctatus
ENSGACG00000013427	si:ch73-21k16.4	100	56.038	ENSSTOG00000024959	GPATCH2	97	54.906	Ictidomys_tridecemlineatus
ENSGACG00000013427	si:ch73-21k16.4	98	53.333	ENSJJAG00000019244	Gpatch2	94	53.372	Jaculus_jaculus
ENSGACG00000013427	si:ch73-21k16.4	100	86.252	ENSLBEG00000008187	si:ch73-21k16.4	99	86.252	Labrus_bergylta
ENSGACG00000013427	si:ch73-21k16.4	100	58.365	ENSLACG00000013951	GPATCH2	99	58.444	Latimeria_chalumnae
ENSGACG00000013427	si:ch73-21k16.4	100	60.755	ENSLOCG00000016058	si:ch73-21k16.4	99	60.943	Lepisosteus_oculatus
ENSGACG00000013427	si:ch73-21k16.4	97	55.922	ENSLAFG00000003787	GPATCH2	97	54.757	Loxodonta_africana
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSMFAG00000000617	GPATCH2	97	55.179	Macaca_fascicularis
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSMMUG00000014946	GPATCH2	97	55.179	Macaca_mulatta
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSMNEG00000034969	GPATCH2	97	55.179	Macaca_nemestrina
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSMLEG00000032285	GPATCH2	97	55.179	Mandrillus_leucophaeus
ENSGACG00000013427	si:ch73-21k16.4	100	86.278	ENSMAMG00000015684	si:ch73-21k16.4	99	86.278	Mastacembelus_armatus
ENSGACG00000013427	si:ch73-21k16.4	100	84.369	ENSMZEG00005015040	si:ch73-21k16.4	99	84.369	Maylandia_zebra
ENSGACG00000013427	si:ch73-21k16.4	58	58.632	ENSMGAG00000009428	GPATCH2	93	59.177	Meleagris_gallopavo
ENSGACG00000013427	si:ch73-21k16.4	100	57.115	ENSMAUG00000004851	Gpatch2	97	55.955	Mesocricetus_auratus
ENSGACG00000013427	si:ch73-21k16.4	100	56.038	ENSMICG00000037090	GPATCH2	97	54.906	Microcebus_murinus
ENSGACG00000013427	si:ch73-21k16.4	97	57.310	ENSMOCG00000020821	Gpatch2	97	55.639	Microtus_ochrogaster
ENSGACG00000013427	si:ch73-21k16.4	100	80.039	ENSMMOG00000015329	si:ch73-21k16.4	99	80.233	Mola_mola
ENSGACG00000013427	si:ch73-21k16.4	100	55.303	ENSMODG00000004195	GPATCH2	93	54.167	Monodelphis_domestica
ENSGACG00000013427	si:ch73-21k16.4	100	78.707	ENSMALG00000016801	si:ch73-21k16.4	99	78.707	Monopterus_albus
ENSGACG00000013427	si:ch73-21k16.4	100	55.766	MGP_CAROLIEiJ_G0015030	Gpatch2	97	54.442	Mus_caroli
ENSGACG00000013427	si:ch73-21k16.4	100	55.198	ENSMUSG00000039210	Gpatch2	97	53.875	Mus_musculus
ENSGACG00000013427	si:ch73-21k16.4	100	56.180	MGP_PahariEiJ_G0028262	Gpatch2	97	55.243	Mus_pahari
ENSGACG00000013427	si:ch73-21k16.4	100	55.388	MGP_SPRETEiJ_G0015830	Gpatch2	97	54.064	Mus_spretus
ENSGACG00000013427	si:ch73-21k16.4	100	56.098	ENSMPUG00000004269	GPATCH2	97	55.159	Mustela_putorius_furo
ENSGACG00000013427	si:ch73-21k16.4	98	54.406	ENSNGAG00000002207	Gpatch2	94	53.448	Nannospalax_galili
ENSGACG00000013427	si:ch73-21k16.4	100	77.419	ENSNBRG00000020932	si:ch73-21k16.4	99	77.419	Neolamprologus_brichardi
ENSGACG00000013427	si:ch73-21k16.4	100	56.497	ENSNLEG00000014201	GPATCH2	97	55.367	Nomascus_leucogenys
ENSGACG00000013427	si:ch73-21k16.4	96	50.884	ENSMEUG00000012239	GPATCH2	96	50.296	Notamacropus_eugenii
ENSGACG00000013427	si:ch73-21k16.4	100	54.049	ENSOPRG00000010126	GPATCH2	97	52.731	Ochotona_princeps
ENSGACG00000013427	si:ch73-21k16.4	100	56.285	ENSODEG00000014927	GPATCH2	97	55.159	Octodon_degus
ENSGACG00000013427	si:ch73-21k16.4	100	87.597	ENSONIG00000000570	si:ch73-21k16.4	100	87.597	Oreochromis_niloticus
ENSGACG00000013427	si:ch73-21k16.4	96	52.311	ENSOANG00000008549	GPATCH2	97	51.941	Ornithorhynchus_anatinus
ENSGACG00000013427	si:ch73-21k16.4	100	56.121	ENSOCUG00000014512	GPATCH2	97	54.802	Oryctolagus_cuniculus
ENSGACG00000013427	si:ch73-21k16.4	100	80.639	ENSORLG00000016810	si:ch73-21k16.4	99	80.639	Oryzias_latipes
ENSGACG00000013427	si:ch73-21k16.4	100	81.168	ENSORLG00020003127	si:ch73-21k16.4	99	81.168	Oryzias_latipes_hni
ENSGACG00000013427	si:ch73-21k16.4	100	80.263	ENSORLG00015022304	si:ch73-21k16.4	99	80.263	Oryzias_latipes_hsok
ENSGACG00000013427	si:ch73-21k16.4	100	81.733	ENSOMEG00000017809	si:ch73-21k16.4	99	82.122	Oryzias_melastigma
ENSGACG00000013427	si:ch73-21k16.4	100	56.685	ENSOGAG00000004485	GPATCH2	97	55.556	Otolemur_garnettii
ENSGACG00000013427	si:ch73-21k16.4	100	56.262	ENSOARG00000011440	GPATCH2	97	55.451	Ovis_aries
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSPPAG00000038887	GPATCH2	97	55.179	Pan_paniscus
ENSGACG00000013427	si:ch73-21k16.4	100	56.767	ENSPPRG00000013363	GPATCH2	96	55.639	Panthera_pardus
ENSGACG00000013427	si:ch73-21k16.4	100	56.309	ENSPTRG00000001986	GPATCH2	97	55.179	Pan_troglodytes
ENSGACG00000013427	si:ch73-21k16.4	100	55.121	ENSPANG00000020943	GPATCH2	97	55.179	Papio_anubis
ENSGACG00000013427	si:ch73-21k16.4	100	66.667	ENSPKIG00000004245	si:ch73-21k16.4	99	67.235	Paramormyrops_kingsleyae
ENSGACG00000013427	si:ch73-21k16.4	100	57.707	ENSPSIG00000005373	GPATCH2	99	56.579	Pelodiscus_sinensis
ENSGACG00000013427	si:ch73-21k16.4	100	75.238	ENSPMGG00000000611	si:ch73-21k16.4	99	75.238	Periophthalmus_magnuspinnatus
ENSGACG00000013427	si:ch73-21k16.4	97	56.615	ENSPEMG00000018364	Gpatch2	95	55.642	Peromyscus_maniculatus_bairdii
ENSGACG00000013427	si:ch73-21k16.4	100	56.144	ENSPCIG00000027888	GPATCH2	97	55.009	Phascolarctos_cinereus
ENSGACG00000013427	si:ch73-21k16.4	100	82.863	ENSPFOG00000008062	si:ch73-21k16.4	99	82.863	Poecilia_formosa
ENSGACG00000013427	si:ch73-21k16.4	100	82.863	ENSPLAG00000022219	si:ch73-21k16.4	99	82.863	Poecilia_latipinna
ENSGACG00000013427	si:ch73-21k16.4	100	83.051	ENSPMEG00000010687	si:ch73-21k16.4	99	83.104	Poecilia_mexicana
ENSGACG00000013427	si:ch73-21k16.4	99	78.652	ENSPREG00000011915	si:ch73-21k16.4	98	78.652	Poecilia_reticulata
ENSGACG00000013427	si:ch73-21k16.4	100	52.166	ENSPPYG00000000216	GPATCH2	96	51.036	Pongo_abelii
ENSGACG00000013427	si:ch73-21k16.4	97	46.289	ENSPCAG00000013998	GPATCH2	99	46.004	Procavia_capensis
ENSGACG00000013427	si:ch73-21k16.4	100	56.530	ENSPVAG00000010649	GPATCH2	96	55.410	Pteropus_vampyrus
ENSGACG00000013427	si:ch73-21k16.4	100	84.369	ENSPNYG00000014144	si:ch73-21k16.4	99	84.369	Pundamilia_nyererei
ENSGACG00000013427	si:ch73-21k16.4	100	56.121	ENSRROG00000012833	GPATCH2	97	54.991	Rhinopithecus_roxellana
ENSGACG00000013427	si:ch73-21k16.4	100	55.932	ENSSBOG00000028891	GPATCH2	97	54.802	Saimiri_boliviensis_boliviensis
ENSGACG00000013427	si:ch73-21k16.4	96	53.157	ENSSHAG00000015123	GPATCH2	95	51.935	Sarcophilus_harrisii
ENSGACG00000013427	si:ch73-21k16.4	100	66.795	ENSSFOG00015000674	gpatch2	99	66.154	Scleropages_formosus
ENSGACG00000013427	si:ch73-21k16.4	100	87.500	ENSSMAG00000009585	si:ch73-21k16.4	99	87.689	Scophthalmus_maximus
ENSGACG00000013427	si:ch73-21k16.4	100	86.817	ENSSDUG00000011998	si:ch73-21k16.4	99	86.817	Seriola_dumerili
ENSGACG00000013427	si:ch73-21k16.4	100	87.006	ENSSLDG00000025385	si:ch73-21k16.4	99	87.006	Seriola_lalandi_dorsalis
ENSGACG00000013427	si:ch73-21k16.4	97	55.039	ENSSARG00000013063	GPATCH2	96	54.845	Sorex_araneus
ENSGACG00000013427	si:ch73-21k16.4	100	86.817	ENSSPAG00000023569	si:ch73-21k16.4	99	86.817	Stegastes_partitus
ENSGACG00000013427	si:ch73-21k16.4	100	55.888	ENSSSCG00000027207	GPATCH2	97	54.766	Sus_scrofa
ENSGACG00000013427	si:ch73-21k16.4	100	83.835	ENSTRUG00000015569	si:ch73-21k16.4	99	83.835	Takifugu_rubripes
ENSGACG00000013427	si:ch73-21k16.4	97	81.944	ENSTNIG00000016304	si:ch73-21k16.4	96	82.738	Tetraodon_nigroviridis
ENSGACG00000013427	si:ch73-21k16.4	65	74.419	ENSTTRG00000003739	GPATCH2	79	74.419	Tursiops_truncatus
ENSGACG00000013427	si:ch73-21k16.4	100	55.722	ENSUMAG00000020588	GPATCH2	97	54.784	Ursus_maritimus
ENSGACG00000013427	si:ch73-21k16.4	100	54.174	ENSVPAG00000005192	GPATCH2	97	53.061	Vicugna_pacos
ENSGACG00000013427	si:ch73-21k16.4	100	55.722	ENSVVUG00000012998	GPATCH2	97	54.597	Vulpes_vulpes
ENSGACG00000013427	si:ch73-21k16.4	97	57.505	ENSXETG00000021194	gpatch2	93	56.530	Xenopus_tropicalis
ENSGACG00000013427	si:ch73-21k16.4	100	79.810	ENSXCOG00000007145	si:ch73-21k16.4	99	79.810	Xiphophorus_couchianus
ENSGACG00000013427	si:ch73-21k16.4	100	83.144	ENSXMAG00000004679	si:ch73-21k16.4	99	83.144	Xiphophorus_maculatus