EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000013428 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4945 bases
Position: chrgroupVIII:17395611-17400555
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017754	TRM13	PF05206.14	2.8e-83	1	1
ENSGACP00000017763	TRM13	PF05206.14	1.7e-81	1	1
ENSGACP00000017754	zf-U11-48K	PF05253.12	6.8e-10	1	1
ENSGACP00000017763	zf-U11-48K	PF05253.12	7.4e-10	1	1
ENSGACP00000017763	zf-TRM13_CCCH	PF11722.8	1e-11	1	1
ENSGACP00000017754	zf-TRM13_CCCH	PF11722.8	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017798	-	1491	-	ENSGACP00000017763	456 (aa)	-	G3PJI3
ENSGACT00000017789	-	1470	-	ENSGACP00000017754	452 (aa)	-	G3PJH4

Gene Model

Click here to download ENSGACG00000013428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013428	trmt13	97	50.968	ENSG00000122435	TRMT13	96	50.360	Homo_sapiens
ENSGACG00000013428	trmt13	98	71.311	ENSAPOG00000015131	trmt13	99	70.722	Acanthochromis_polyacanthus
ENSGACG00000013428	trmt13	97	51.717	ENSAMEG00000008917	TRMT13	95	51.288	Ailuropoda_melanoleuca
ENSGACG00000013428	trmt13	99	73.866	ENSACIG00000005804	trmt13	94	72.786	Amphilophus_citrinellus
ENSGACG00000013428	trmt13	98	71.753	ENSAOCG00000023585	trmt13	99	70.928	Amphiprion_ocellaris
ENSGACG00000013428	trmt13	98	71.959	ENSAPEG00000004025	trmt13	99	70.309	Amphiprion_percula
ENSGACG00000013428	trmt13	99	74.138	ENSATEG00000006597	trmt13	98	73.276	Anabas_testudineus
ENSGACG00000013428	trmt13	90	53.488	ENSAPLG00000014924	TRMT13	99	53.256	Anas_platyrhynchos
ENSGACG00000013428	trmt13	98	53.079	ENSACAG00000003498	TRMT13	99	52.866	Anolis_carolinensis
ENSGACG00000013428	trmt13	97	51.613	ENSANAG00000019525	TRMT13	89	58.763	Aotus_nancymaae
ENSGACG00000013428	trmt13	98	75.947	ENSACLG00000020018	trmt13	99	74.833	Astatotilapia_calliptera
ENSGACG00000013428	trmt13	99	54.873	ENSAMXG00000017963	trmt13	99	54.449	Astyanax_mexicanus
ENSGACG00000013428	trmt13	97	50.641	ENSBTAG00000015781	TRMT13	95	50.000	Bos_taurus
ENSGACG00000013428	trmt13	97	51.183	ENSCJAG00000000200	TRMT13	89	61.314	Callithrix_jacchus
ENSGACG00000013428	trmt13	64	49.038	ENSCAFG00000020021	TRMT13	97	48.077	Canis_familiaris
ENSGACG00000013428	trmt13	61	54.182	ENSCAFG00020011572	TRMT13	89	56.870	Canis_lupus_dingo
ENSGACG00000013428	trmt13	97	50.855	ENSCHIG00000015395	TRMT13	98	49.480	Capra_hircus
ENSGACG00000013428	trmt13	99	51.471	ENSTSYG00000010811	TRMT13	98	58.416	Carlito_syrichta
ENSGACG00000013428	trmt13	75	40.341	ENSCAPG00000009085	TRMT13	96	40.909	Cavia_aperea
ENSGACG00000013428	trmt13	97	51.732	ENSCPOG00000000694	TRMT13	95	51.082	Cavia_porcellus
ENSGACG00000013428	trmt13	97	51.613	ENSCCAG00000023772	TRMT13	89	58.763	Cebus_capucinus
ENSGACG00000013428	trmt13	100	50.418	ENSCATG00000033556	TRMT13	89	60.825	Cercocebus_atys
ENSGACG00000013428	trmt13	89	51.190	ENSCLAG00000008220	TRMT13	99	51.185	Chinchilla_lanigera
ENSGACG00000013428	trmt13	100	50.628	ENSCSAG00000001506	TRMT13	98	50.000	Chlorocebus_sabaeus
ENSGACG00000013428	trmt13	98	53.419	ENSCPBG00000026671	TRMT13	98	52.431	Chrysemys_picta_bellii
ENSGACG00000013428	trmt13	100	50.209	ENSCANG00000034659	TRMT13	89	59.794	Colobus_angolensis_palliatus
ENSGACG00000013428	trmt13	97	51.502	ENSCGRG00001021601	Trmt13	95	51.188	Cricetulus_griseus_chok1gshd
ENSGACG00000013428	trmt13	51	47.431	ENSCGRG00000000093	-	97	46.640	Cricetulus_griseus_crigri
ENSGACG00000013428	trmt13	98	70.354	ENSCSEG00000000591	trmt13	99	70.354	Cynoglossus_semilaevis
ENSGACG00000013428	trmt13	98	71.613	ENSCVAG00000017342	trmt13	94	71.183	Cyprinodon_variegatus
ENSGACG00000013428	trmt13	98	56.087	ENSDARG00000102846	trmt13	97	55.217	Danio_rerio
ENSGACG00000013428	trmt13	61	53.455	ENSDNOG00000001710	TRMT13	80	54.104	Dasypus_novemcinctus
ENSGACG00000013428	trmt13	100	51.875	ENSDORG00000015808	Trmt13	98	51.250	Dipodomys_ordii
ENSGACG00000013428	trmt13	99	37.916	FBgn0037435	CG18048	98	37.916	Drosophila_melanogaster
ENSGACG00000013428	trmt13	97	45.339	ENSETEG00000005819	TRMT13	96	44.703	Echinops_telfairi
ENSGACG00000013428	trmt13	82	58.537	ENSEBUG00000014444	trmt13	96	44.130	Eptatretus_burgeri
ENSGACG00000013428	trmt13	97	51.709	ENSEASG00005015918	TRMT13	95	51.068	Equus_asinus_asinus
ENSGACG00000013428	trmt13	97	51.496	ENSECAG00000022626	TRMT13	95	50.855	Equus_caballus
ENSGACG00000013428	trmt13	76	49.474	ENSEEUG00000000294	TRMT13	72	50.172	Erinaceus_europaeus
ENSGACG00000013428	trmt13	99	57.356	ENSELUG00000003803	trmt13	99	57.356	Esox_lucius
ENSGACG00000013428	trmt13	100	50.209	ENSFCAG00000030618	TRMT13	98	50.000	Felis_catus
ENSGACG00000013428	trmt13	97	54.486	ENSFALG00000002424	TRMT13	96	53.913	Ficedula_albicollis
ENSGACG00000013428	trmt13	100	51.046	ENSFDAG00000006342	TRMT13	98	50.418	Fukomys_damarensis
ENSGACG00000013428	trmt13	82	71.756	ENSFHEG00000022954	trmt13	100	70.905	Fundulus_heteroclitus
ENSGACG00000013428	trmt13	96	57.596	ENSGMOG00000013223	trmt13	100	57.370	Gadus_morhua
ENSGACG00000013428	trmt13	97	51.820	ENSGALG00000005290	TRMT13	96	53.173	Gallus_gallus
ENSGACG00000013428	trmt13	79	70.137	ENSGAFG00000001577	trmt13	82	70.137	Gambusia_affinis
ENSGACG00000013428	trmt13	98	53.305	ENSGAGG00000023303	TRMT13	97	59.341	Gopherus_agassizii
ENSGACG00000013428	trmt13	97	50.753	ENSGGOG00000005616	TRMT13	95	50.108	Gorilla_gorilla
ENSGACG00000013428	trmt13	98	76.327	ENSHBUG00000007754	trmt13	99	75.442	Haplochromis_burtoni
ENSGACG00000013428	trmt13	100	50.209	ENSHGLG00000002164	TRMT13	98	49.582	Heterocephalus_glaber_female
ENSGACG00000013428	trmt13	100	50.209	ENSHGLG00100001618	TRMT13	98	49.582	Heterocephalus_glaber_male
ENSGACG00000013428	trmt13	97	58.590	ENSHCOG00000020553	trmt13	97	57.930	Hippocampus_comes
ENSGACG00000013428	trmt13	99	56.522	ENSIPUG00000024787	trmt13	99	56.739	Ictalurus_punctatus
ENSGACG00000013428	trmt13	97	50.323	ENSSTOG00000013483	TRMT13	96	49.677	Ictidomys_tridecemlineatus
ENSGACG00000013428	trmt13	100	49.792	ENSJJAG00000018012	Trmt13	99	49.476	Jaculus_jaculus
ENSGACG00000013428	trmt13	69	68.868	ENSKMAG00000007639	trmt13	98	67.089	Kryptolebias_marmoratus
ENSGACG00000013428	trmt13	98	77.106	ENSLBEG00000020238	trmt13	100	75.594	Labrus_bergylta
ENSGACG00000013428	trmt13	98	54.390	ENSLACG00000013153	TRMT13	98	54.176	Latimeria_chalumnae
ENSGACG00000013428	trmt13	99	55.724	ENSLOCG00000000418	trmt13	99	55.724	Lepisosteus_oculatus
ENSGACG00000013428	trmt13	78	49.598	ENSLAFG00000002383	TRMT13	99	48.794	Loxodonta_africana
ENSGACG00000013428	trmt13	100	50.000	ENSMFAG00000034681	TRMT13	89	59.794	Macaca_fascicularis
ENSGACG00000013428	trmt13	100	50.000	ENSMMUG00000004243	TRMT13	89	59.794	Macaca_mulatta
ENSGACG00000013428	trmt13	100	50.000	ENSMNEG00000036102	TRMT13	89	59.794	Macaca_nemestrina
ENSGACG00000013428	trmt13	100	50.000	ENSMLEG00000034258	TRMT13	89	58.763	Mandrillus_leucophaeus
ENSGACG00000013428	trmt13	99	78.337	ENSMAMG00000016597	trmt13	97	78.337	Mastacembelus_armatus
ENSGACG00000013428	trmt13	98	75.724	ENSMZEG00005020959	trmt13	99	74.610	Maylandia_zebra
ENSGACG00000013428	trmt13	90	53.162	ENSMGAG00000006970	TRMT13	99	52.927	Meleagris_gallopavo
ENSGACG00000013428	trmt13	98	51.586	ENSMAUG00000010448	Trmt13	96	51.064	Mesocricetus_auratus
ENSGACG00000013428	trmt13	97	51.828	ENSMICG00000005283	TRMT13	98	50.209	Microcebus_murinus
ENSGACG00000013428	trmt13	98	51.168	ENSMOCG00000019914	Trmt13	97	50.633	Microtus_ochrogaster
ENSGACG00000013428	trmt13	58	68.939	ENSMMOG00000007762	trmt13	90	68.939	Mola_mola
ENSGACG00000013428	trmt13	97	49.893	ENSMODG00000003646	TRMT13	98	48.548	Monodelphis_domestica
ENSGACG00000013428	trmt13	99	73.144	ENSMALG00000020965	trmt13	98	73.187	Monopterus_albus
ENSGACG00000013428	trmt13	99	51.050	MGP_CAROLIEiJ_G0025568	Trmt13	100	50.685	Mus_caroli
ENSGACG00000013428	trmt13	99	51.050	ENSMUSG00000033439	Trmt13	98	50.630	Mus_musculus
ENSGACG00000013428	trmt13	99	51.050	MGP_PahariEiJ_G0027014	Trmt13	78	71.429	Mus_pahari
ENSGACG00000013428	trmt13	99	51.261	MGP_SPRETEiJ_G0026518	Trmt13	97	50.951	Mus_spretus
ENSGACG00000013428	trmt13	78	49.727	ENSMPUG00000002078	-	97	48.907	Mustela_putorius_furo
ENSGACG00000013428	trmt13	97	52.688	ENSMLUG00000002124	TRMT13	95	52.484	Myotis_lucifugus
ENSGACG00000013428	trmt13	98	69.890	ENSNBRG00000006783	trmt13	98	69.451	Neolamprologus_brichardi
ENSGACG00000013428	trmt13	97	50.753	ENSNLEG00000035917	TRMT13	95	50.108	Nomascus_leucogenys
ENSGACG00000013428	trmt13	55	46.586	ENSMEUG00000013346	-	99	48.207	Notamacropus_eugenii
ENSGACG00000013428	trmt13	61	55.273	ENSOPRG00000012048	TRMT13	53	58.015	Ochotona_princeps
ENSGACG00000013428	trmt13	98	76.770	ENSONIG00000004574	trmt13	99	75.885	Oreochromis_niloticus
ENSGACG00000013428	trmt13	90	53.687	ENSOANG00000012057	TRMT13	98	52.887	Ornithorhynchus_anatinus
ENSGACG00000013428	trmt13	97	51.502	ENSOCUG00000023095	TRMT13	96	50.858	Oryctolagus_cuniculus
ENSGACG00000013428	trmt13	99	64.270	ENSORLG00000003320	trmt13	99	64.706	Oryzias_latipes
ENSGACG00000013428	trmt13	98	66.444	ENSORLG00020005972	trmt13	98	66.222	Oryzias_latipes_hni
ENSGACG00000013428	trmt13	99	71.335	ENSORLG00015002270	trmt13	99	71.116	Oryzias_latipes_hsok
ENSGACG00000013428	trmt13	99	71.991	ENSOMEG00000006724	trmt13	96	71.834	Oryzias_melastigma
ENSGACG00000013428	trmt13	99	49.895	ENSOGAG00000005618	TRMT13	95	49.167	Otolemur_garnettii
ENSGACG00000013428	trmt13	97	50.855	ENSOARG00000017983	TRMT13	98	49.480	Ovis_aries
ENSGACG00000013428	trmt13	97	51.398	ENSPPAG00000043736	TRMT13	95	50.753	Pan_paniscus
ENSGACG00000013428	trmt13	100	50.209	ENSPPRG00000003424	TRMT13	98	50.000	Panthera_pardus
ENSGACG00000013428	trmt13	100	50.209	ENSPTIG00000018598	TRMT13	98	50.000	Panthera_tigris_altaica
ENSGACG00000013428	trmt13	97	51.183	ENSPTRG00000001001	TRMT13	95	50.538	Pan_troglodytes
ENSGACG00000013428	trmt13	100	50.209	ENSPANG00000007598	TRMT13	89	59.794	Papio_anubis
ENSGACG00000013428	trmt13	98	58.772	ENSPKIG00000001514	trmt13	99	58.022	Paramormyrops_kingsleyae
ENSGACG00000013428	trmt13	88	52.857	ENSPSIG00000012703	TRMT13	99	52.619	Pelodiscus_sinensis
ENSGACG00000013428	trmt13	99	62.445	ENSPMGG00000013298	trmt13	95	61.790	Periophthalmus_magnuspinnatus
ENSGACG00000013428	trmt13	98	51.282	ENSPEMG00000000275	Trmt13	97	49.895	Peromyscus_maniculatus_bairdii
ENSGACG00000013428	trmt13	96	48.203	ENSPMAG00000000823	trmt13	97	47.974	Petromyzon_marinus
ENSGACG00000013428	trmt13	99	50.936	ENSPCIG00000007699	TRMT13	99	50.728	Phascolarctos_cinereus
ENSGACG00000013428	trmt13	97	66.815	ENSPFOG00000008675	trmt13	95	66.592	Poecilia_formosa
ENSGACG00000013428	trmt13	98	66.812	ENSPLAG00000009709	trmt13	99	66.812	Poecilia_latipinna
ENSGACG00000013428	trmt13	98	66.667	ENSPMEG00000022954	trmt13	99	66.667	Poecilia_mexicana
ENSGACG00000013428	trmt13	79	72.011	ENSPREG00000005645	trmt13	95	65.505	Poecilia_reticulata
ENSGACG00000013428	trmt13	97	50.968	ENSPPYG00000001120	TRMT13	99	49.583	Pongo_abelii
ENSGACG00000013428	trmt13	97	51.398	ENSPCAG00000002340	TRMT13	95	51.059	Procavia_capensis
ENSGACG00000013428	trmt13	97	50.968	ENSPCOG00000017984	TRMT13	98	49.372	Propithecus_coquereli
ENSGACG00000013428	trmt13	97	50.968	ENSPVAG00000017430	TRMT13	95	50.323	Pteropus_vampyrus
ENSGACG00000013428	trmt13	98	73.009	ENSPNYG00000013690	trmt13	99	72.506	Pundamilia_nyererei
ENSGACG00000013428	trmt13	99	55.794	ENSPNAG00000022130	trmt13	99	55.054	Pygocentrus_nattereri
ENSGACG00000013428	trmt13	97	51.724	ENSRNOG00000015140	Trmt13	94	50.106	Rattus_norvegicus
ENSGACG00000013428	trmt13	100	50.209	ENSRBIG00000037686	TRMT13	89	59.794	Rhinopithecus_bieti
ENSGACG00000013428	trmt13	100	50.209	ENSRROG00000044057	TRMT13	89	59.794	Rhinopithecus_roxellana
ENSGACG00000013428	trmt13	97	51.398	ENSSBOG00000026541	TRMT13	89	58.763	Saimiri_boliviensis_boliviensis
ENSGACG00000013428	trmt13	90	51.501	ENSSHAG00000005213	TRMT13	95	50.577	Sarcophilus_harrisii
ENSGACG00000013428	trmt13	99	57.826	ENSSFOG00015017560	trmt13	99	57.174	Scleropages_formosus
ENSGACG00000013428	trmt13	99	75.536	ENSSMAG00000014592	trmt13	98	74.249	Scophthalmus_maximus
ENSGACG00000013428	trmt13	99	77.966	ENSSDUG00000015508	trmt13	98	76.261	Seriola_dumerili
ENSGACG00000013428	trmt13	99	77.590	ENSSLDG00000019060	trmt13	98	76.321	Seriola_lalandi_dorsalis
ENSGACG00000013428	trmt13	99	46.849	ENSSARG00000010344	TRMT13	99	45.912	Sorex_araneus
ENSGACG00000013428	trmt13	97	53.159	ENSSPUG00000016339	TRMT13	99	52.928	Sphenodon_punctatus
ENSGACG00000013428	trmt13	98	75.877	ENSSPAG00000011922	trmt13	99	74.561	Stegastes_partitus
ENSGACG00000013428	trmt13	97	51.398	ENSSSCG00000006869	TRMT13	98	49.791	Sus_scrofa
ENSGACG00000013428	trmt13	97	54.825	ENSTGUG00000005253	TRMT13	98	54.605	Taeniopygia_guttata
ENSGACG00000013428	trmt13	98	69.956	ENSTRUG00000008400	trmt13	99	69.048	Takifugu_rubripes
ENSGACG00000013428	trmt13	68	48.810	ENSTBEG00000008911	TRMT13	75	49.390	Tupaia_belangeri
ENSGACG00000013428	trmt13	97	49.892	ENSUAMG00000017251	TRMT13	95	49.460	Ursus_americanus
ENSGACG00000013428	trmt13	97	51.613	ENSUMAG00000007901	TRMT13	99	50.577	Ursus_maritimus
ENSGACG00000013428	trmt13	70	63.462	ENSVPAG00000001034	TRMT13	84	63.462	Vicugna_pacos
ENSGACG00000013428	trmt13	96	51.082	ENSVVUG00000021996	TRMT13	95	50.433	Vulpes_vulpes
ENSGACG00000013428	trmt13	98	52.308	ENSXETG00000013204	trmt13	98	52.308	Xenopus_tropicalis
ENSGACG00000013428	trmt13	98	66.079	ENSXMAG00000010765	trmt13	99	65.859	Xiphophorus_maculatus