EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000013497 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3838 bases
Position: chrgroupVIII:17410537-17414374
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017849	RTC	PF01137.21	3.8e-86	1	1
ENSGACP00000017849	RTC_insert	PF05189.13	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000017884	-	1320	-	ENSGACP00000017849	364 (aa)	-	G3PJR9

Gene Model

Click here to download ENSGACG00000013497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013497	rtca	100	69.399	ENSG00000137996	RTCA	100	69.399	Homo_sapiens
ENSGACG00000013497	rtca	100	86.538	ENSAPOG00000001345	rtca	99	86.538	Acanthochromis_polyacanthus
ENSGACG00000013497	rtca	73	69.517	ENSAMEG00000008855	RTCA	100	69.517	Ailuropoda_melanoleuca
ENSGACG00000013497	rtca	100	87.912	ENSACIG00000019643	rtca	100	87.912	Amphilophus_citrinellus
ENSGACG00000013497	rtca	100	87.088	ENSAOCG00000014979	rtca	99	87.088	Amphiprion_ocellaris
ENSGACG00000013497	rtca	100	86.813	ENSAPEG00000006945	rtca	99	86.813	Amphiprion_percula
ENSGACG00000013497	rtca	96	89.112	ENSATEG00000006315	rtca	96	89.112	Anabas_testudineus
ENSGACG00000013497	rtca	96	66.006	ENSAPLG00000015430	RTCA	100	66.006	Anas_platyrhynchos
ENSGACG00000013497	rtca	100	69.399	ENSANAG00000025446	RTCA	100	69.399	Aotus_nancymaae
ENSGACG00000013497	rtca	100	87.088	ENSACLG00000020770	rtca	99	87.088	Astatotilapia_calliptera
ENSGACG00000013497	rtca	100	78.297	ENSAMXG00000043271	rtca	100	78.297	Astyanax_mexicanus
ENSGACG00000013497	rtca	100	69.945	ENSBTAG00000006321	RTCA	100	69.945	Bos_taurus
ENSGACG00000013497	rtca	100	69.399	ENSCJAG00000003398	RTCA	100	69.399	Callithrix_jacchus
ENSGACG00000013497	rtca	100	69.126	ENSCAFG00000020010	RTCA	68	69.126	Canis_familiaris
ENSGACG00000013497	rtca	100	69.126	ENSCAFG00020011528	RTCA	57	69.126	Canis_lupus_dingo
ENSGACG00000013497	rtca	100	69.672	ENSCHIG00000018937	RTCA	100	69.672	Capra_hircus
ENSGACG00000013497	rtca	100	69.399	ENSTSYG00000011305	RTCA	100	69.399	Carlito_syrichta
ENSGACG00000013497	rtca	100	69.399	ENSCCAG00000021844	RTCA	99	71.171	Cebus_capucinus
ENSGACG00000013497	rtca	100	67.282	ENSCATG00000019364	RTCA	100	69.256	Cercocebus_atys
ENSGACG00000013497	rtca	87	70.253	ENSCLAG00000006125	RTCA	100	70.253	Chinchilla_lanigera
ENSGACG00000013497	rtca	100	69.399	ENSCSAG00000001509	RTCA	100	69.399	Chlorocebus_sabaeus
ENSGACG00000013497	rtca	100	68.033	ENSCHOG00000005211	RTCA	100	68.033	Choloepus_hoffmanni
ENSGACG00000013497	rtca	100	66.575	ENSCPBG00000026658	RTCA	100	66.575	Chrysemys_picta_bellii
ENSGACG00000013497	rtca	99	55.402	ENSCING00000007875	-	99	55.402	Ciona_intestinalis
ENSGACG00000013497	rtca	99	54.294	ENSCSAVG00000007269	-	99	54.294	Ciona_savignyi
ENSGACG00000013497	rtca	100	69.126	ENSCANG00000040106	RTCA	100	69.126	Colobus_angolensis_palliatus
ENSGACG00000013497	rtca	73	69.888	ENSCGRG00001013163	Rtca	85	69.888	Cricetulus_griseus_chok1gshd
ENSGACG00000013497	rtca	98	80.447	ENSCSEG00000000530	rtca	96	80.447	Cynoglossus_semilaevis
ENSGACG00000013497	rtca	100	70.219	ENSCVAG00000021809	rtca	100	70.219	Cyprinodon_variegatus
ENSGACG00000013497	rtca	100	77.198	ENSDARG00000002215	rtca	100	77.198	Danio_rerio
ENSGACG00000013497	rtca	100	69.399	ENSDNOG00000000456	RTCA	100	69.399	Dasypus_novemcinctus
ENSGACG00000013497	rtca	100	69.672	ENSDORG00000005448	Rtca	100	69.672	Dipodomys_ordii
ENSGACG00000013497	rtca	99	40.110	FBgn0025630	Rtca	99	40.110	Drosophila_melanogaster
ENSGACG00000013497	rtca	95	51.156	ENSEBUG00000008556	rtca	95	51.156	Eptatretus_burgeri
ENSGACG00000013497	rtca	100	69.399	ENSEASG00005015926	RTCA	100	69.399	Equus_asinus_asinus
ENSGACG00000013497	rtca	100	69.399	ENSECAG00000019831	RTCA	100	69.399	Equus_caballus
ENSGACG00000013497	rtca	91	63.584	ENSEEUG00000001165	RTCA	100	63.584	Erinaceus_europaeus
ENSGACG00000013497	rtca	99	76.796	ENSELUG00000003741	rtca	99	76.796	Esox_lucius
ENSGACG00000013497	rtca	100	69.672	ENSFCAG00000024460	RTCA	100	69.672	Felis_catus
ENSGACG00000013497	rtca	93	68.047	ENSFALG00000002443	RTCA	91	68.047	Ficedula_albicollis
ENSGACG00000013497	rtca	98	55.525	ENSFDAG00000016084	-	100	55.525	Fukomys_damarensis
ENSGACG00000013497	rtca	100	68.579	ENSFDAG00000012070	-	100	68.579	Fukomys_damarensis
ENSGACG00000013497	rtca	68	78.049	ENSFHEG00000002868	rtca	87	89.109	Fundulus_heteroclitus
ENSGACG00000013497	rtca	100	80.769	ENSGMOG00000013264	rtca	100	80.769	Gadus_morhua
ENSGACG00000013497	rtca	100	67.123	ENSGALG00000005277	RTCA	100	67.123	Gallus_gallus
ENSGACG00000013497	rtca	100	87.637	ENSGAFG00000011853	rtca	99	87.637	Gambusia_affinis
ENSGACG00000013497	rtca	80	66.894	ENSGAGG00000023306	RTCA	100	66.894	Gopherus_agassizii
ENSGACG00000013497	rtca	100	68.852	ENSGGOG00000009546	-	100	68.852	Gorilla_gorilla
ENSGACG00000013497	rtca	100	68.306	ENSGGOG00000044018	-	100	68.306	Gorilla_gorilla
ENSGACG00000013497	rtca	100	86.813	ENSHBUG00000002114	rtca	99	86.813	Haplochromis_burtoni
ENSGACG00000013497	rtca	100	69.399	ENSHGLG00000002617	RTCA	100	69.399	Heterocephalus_glaber_female
ENSGACG00000013497	rtca	100	69.399	ENSHGLG00100006056	RTCA	100	69.399	Heterocephalus_glaber_male
ENSGACG00000013497	rtca	100	74.451	ENSHCOG00000020628	rtca	89	74.451	Hippocampus_comes
ENSGACG00000013497	rtca	100	76.923	ENSIPUG00000024803	rtca	100	76.923	Ictalurus_punctatus
ENSGACG00000013497	rtca	100	65.027	ENSSTOG00000013528	-	100	65.027	Ictidomys_tridecemlineatus
ENSGACG00000013497	rtca	100	61.475	ENSSTOG00000033099	-	100	61.475	Ictidomys_tridecemlineatus
ENSGACG00000013497	rtca	100	51.781	ENSJJAG00000016178	Rtca	100	51.781	Jaculus_jaculus
ENSGACG00000013497	rtca	100	85.440	ENSKMAG00000006651	rtca	99	85.440	Kryptolebias_marmoratus
ENSGACG00000013497	rtca	100	87.637	ENSLBEG00000028971	rtca	100	87.637	Labrus_bergylta
ENSGACG00000013497	rtca	88	87.147	ENSLBEG00000002448	-	99	87.147	Labrus_bergylta
ENSGACG00000013497	rtca	100	67.397	ENSLACG00000013666	RTCA	100	67.397	Latimeria_chalumnae
ENSGACG00000013497	rtca	100	75.616	ENSLOCG00000000093	rtca	99	75.616	Lepisosteus_oculatus
ENSGACG00000013497	rtca	100	68.306	ENSLAFG00000001473	RTCA	100	68.306	Loxodonta_africana
ENSGACG00000013497	rtca	100	69.399	ENSMFAG00000034132	RTCA	100	69.399	Macaca_fascicularis
ENSGACG00000013497	rtca	100	69.399	ENSMMUG00000019105	RTCA	100	69.399	Macaca_mulatta
ENSGACG00000013497	rtca	84	68.932	ENSMNEG00000037163	RTCA	100	68.932	Macaca_nemestrina
ENSGACG00000013497	rtca	100	56.557	ENSMLEG00000042151	RTCA	100	56.557	Mandrillus_leucophaeus
ENSGACG00000013497	rtca	100	89.286	ENSMAMG00000016536	rtca	100	89.286	Mastacembelus_armatus
ENSGACG00000013497	rtca	100	87.088	ENSMZEG00005017945	rtca	99	87.088	Maylandia_zebra
ENSGACG00000013497	rtca	87	66.981	ENSMGAG00000006892	RTCA	99	66.981	Meleagris_gallopavo
ENSGACG00000013497	rtca	100	70.219	ENSMAUG00000008488	Rtca	100	70.219	Mesocricetus_auratus
ENSGACG00000013497	rtca	84	69.579	ENSMICG00000008643	RTCA	100	69.579	Microcebus_murinus
ENSGACG00000013497	rtca	100	69.126	ENSMOCG00000016660	Rtca	100	69.126	Microtus_ochrogaster
ENSGACG00000013497	rtca	84	87.296	ENSMMOG00000007750	rtca	100	87.296	Mola_mola
ENSGACG00000013497	rtca	100	69.672	ENSMODG00000003557	RTCA	100	69.672	Monodelphis_domestica
ENSGACG00000013497	rtca	100	88.187	ENSMALG00000020844	rtca	100	88.187	Monopterus_albus
ENSGACG00000013497	rtca	100	68.852	MGP_CAROLIEiJ_G0025565	Rtca	100	68.852	Mus_caroli
ENSGACG00000013497	rtca	100	68.579	ENSMUSG00000000339	Rtca	100	68.579	Mus_musculus
ENSGACG00000013497	rtca	100	68.852	MGP_PahariEiJ_G0027011	Rtca	100	68.852	Mus_pahari
ENSGACG00000013497	rtca	100	69.126	MGP_SPRETEiJ_G0026515	Rtca	100	69.126	Mus_spretus
ENSGACG00000013497	rtca	100	69.672	ENSMPUG00000012119	RTCA	100	69.672	Mustela_putorius_furo
ENSGACG00000013497	rtca	100	66.213	ENSMLUG00000009922	RTCA	100	66.213	Myotis_lucifugus
ENSGACG00000013497	rtca	100	69.399	ENSNGAG00000011540	Rtca	99	69.399	Nannospalax_galili
ENSGACG00000013497	rtca	100	86.813	ENSNBRG00000003062	rtca	99	86.813	Neolamprologus_brichardi
ENSGACG00000013497	rtca	100	69.126	ENSNLEG00000031426	RTCA	100	69.126	Nomascus_leucogenys
ENSGACG00000013497	rtca	73	65.428	ENSOPRG00000012092	RTCA	71	65.428	Ochotona_princeps
ENSGACG00000013497	rtca	95	70.115	ENSODEG00000006990	RTCA	96	70.370	Octodon_degus
ENSGACG00000013497	rtca	100	87.088	ENSONIG00000007753	rtca	99	87.088	Oreochromis_niloticus
ENSGACG00000013497	rtca	87	70.032	ENSOANG00000012055	RTCA	98	70.032	Ornithorhynchus_anatinus
ENSGACG00000013497	rtca	100	69.399	ENSOCUG00000014247	RTCA	100	69.399	Oryctolagus_cuniculus
ENSGACG00000013497	rtca	100	86.813	ENSORLG00000013605	rtca	100	86.813	Oryzias_latipes
ENSGACG00000013497	rtca	100	87.088	ENSORLG00020001904	rtca	100	87.088	Oryzias_latipes_hni
ENSGACG00000013497	rtca	100	86.813	ENSORLG00015021064	rtca	100	86.813	Oryzias_latipes_hsok
ENSGACG00000013497	rtca	100	85.989	ENSOMEG00000000756	rtca	100	85.989	Oryzias_melastigma
ENSGACG00000013497	rtca	100	63.388	ENSOGAG00000005627	RTCA	100	63.388	Otolemur_garnettii
ENSGACG00000013497	rtca	87	69.811	ENSOARG00000018122	RTCA	100	69.811	Ovis_aries
ENSGACG00000013497	rtca	100	66.227	ENSPPAG00000035119	RTCA	100	67.961	Pan_paniscus
ENSGACG00000013497	rtca	100	69.945	ENSPPRG00000000350	RTCA	100	69.945	Panthera_pardus
ENSGACG00000013497	rtca	100	69.399	ENSPTIG00000012816	RTCA	100	69.399	Panthera_tigris_altaica
ENSGACG00000013497	rtca	100	66.227	ENSPTRG00000001004	RTCA	100	67.961	Pan_troglodytes
ENSGACG00000013497	rtca	100	69.399	ENSPANG00000000346	RTCA	100	69.399	Papio_anubis
ENSGACG00000013497	rtca	100	78.846	ENSPKIG00000001653	rtca	100	78.846	Paramormyrops_kingsleyae
ENSGACG00000013497	rtca	100	66.301	ENSPSIG00000011408	RTCA	100	66.301	Pelodiscus_sinensis
ENSGACG00000013497	rtca	100	69.672	ENSPEMG00000018582	Rtca	100	69.672	Peromyscus_maniculatus_bairdii
ENSGACG00000013497	rtca	99	54.848	ENSPMAG00000009110	rtca	98	54.848	Petromyzon_marinus
ENSGACG00000013497	rtca	100	69.945	ENSPCIG00000007684	RTCA	100	69.945	Phascolarctos_cinereus
ENSGACG00000013497	rtca	100	86.575	ENSPFOG00000004824	rtca	100	86.575	Poecilia_formosa
ENSGACG00000013497	rtca	100	86.813	ENSPLAG00000011753	rtca	99	86.813	Poecilia_latipinna
ENSGACG00000013497	rtca	100	86.813	ENSPMEG00000020469	rtca	99	86.813	Poecilia_mexicana
ENSGACG00000013497	rtca	100	87.363	ENSPREG00000001365	rtca	99	87.363	Poecilia_reticulata
ENSGACG00000013497	rtca	100	69.399	ENSPPYG00000001115	RTCA	100	69.399	Pongo_abelii
ENSGACG00000013497	rtca	99	67.036	ENSPCAG00000005076	RTCA	99	67.036	Procavia_capensis
ENSGACG00000013497	rtca	100	69.672	ENSPCOG00000005603	RTCA	100	69.672	Propithecus_coquereli
ENSGACG00000013497	rtca	100	66.227	ENSPVAG00000009478	RTCA	100	66.227	Pteropus_vampyrus
ENSGACG00000013497	rtca	100	87.088	ENSPNYG00000004722	rtca	99	87.088	Pundamilia_nyererei
ENSGACG00000013497	rtca	100	76.923	ENSPNAG00000022270	rtca	100	76.923	Pygocentrus_nattereri
ENSGACG00000013497	rtca	100	68.579	ENSRNOG00000014575	Rtca	100	68.579	Rattus_norvegicus
ENSGACG00000013497	rtca	100	66.491	ENSRBIG00000041180	RTCA	100	68.285	Rhinopithecus_bieti
ENSGACG00000013497	rtca	100	68.852	ENSRROG00000024929	RTCA	100	68.852	Rhinopithecus_roxellana
ENSGACG00000013497	rtca	100	69.126	ENSSBOG00000028626	RTCA	100	69.126	Saimiri_boliviensis_boliviensis
ENSGACG00000013497	rtca	100	69.672	ENSSHAG00000001758	RTCA	100	69.672	Sarcophilus_harrisii
ENSGACG00000013497	rtca	99	83.934	ENSSMAG00000014680	rtca	98	83.934	Scophthalmus_maximus
ENSGACG00000013497	rtca	98	89.106	ENSSDUG00000015585	rtca	98	88.398	Seriola_dumerili
ENSGACG00000013497	rtca	99	87.569	ENSSLDG00000018985	rtca	98	87.569	Seriola_lalandi_dorsalis
ENSGACG00000013497	rtca	87	64.669	ENSSARG00000013993	RTCA	100	64.669	Sorex_araneus
ENSGACG00000013497	rtca	100	89.286	ENSSPAG00000011938	rtca	99	89.286	Stegastes_partitus
ENSGACG00000013497	rtca	100	69.672	ENSSSCG00000006865	RTCA	100	69.672	Sus_scrofa
ENSGACG00000013497	rtca	100	67.671	ENSTGUG00000005154	RTCA	100	67.671	Taeniopygia_guttata
ENSGACG00000013497	rtca	100	88.736	ENSTRUG00000008799	rtca	100	88.736	Takifugu_rubripes
ENSGACG00000013497	rtca	100	84.615	ENSTNIG00000004725	rtca	100	84.615	Tetraodon_nigroviridis
ENSGACG00000013497	rtca	58	60.000	ENSTBEG00000000943	RTCA	59	60.000	Tupaia_belangeri
ENSGACG00000013497	rtca	100	67.282	ENSTTRG00000015327	RTCA	100	67.282	Tursiops_truncatus
ENSGACG00000013497	rtca	94	69.388	ENSUAMG00000017265	RTCA	96	69.388	Ursus_americanus
ENSGACG00000013497	rtca	100	69.126	ENSUMAG00000007881	RTCA	100	69.126	Ursus_maritimus
ENSGACG00000013497	rtca	87	62.145	ENSVPAG00000001039	RTCA	84	62.145	Vicugna_pacos
ENSGACG00000013497	rtca	100	69.126	ENSVVUG00000022041	RTCA	68	69.126	Vulpes_vulpes
ENSGACG00000013497	rtca	98	57.618	ENSXETG00000031661	RTCA	98	57.618	Xenopus_tropicalis
ENSGACG00000013497	rtca	100	76.099	ENSXCOG00000008002	rtca	100	76.099	Xiphophorus_couchianus
ENSGACG00000013497	rtca	100	87.363	ENSXMAG00000005482	rtca	99	87.363	Xiphophorus_maculatus