EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013611 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1658 bases
Position: chrgroupXIX:18485565-18487222
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000017994	MMR_HSR1	PF01926.23	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018029	-	797	-	ENSGACP00000017994	204 (aa)	-	G3PK64

Gene Model

Click here to download ENSGACG00000013611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013611	-	78	32.716	ENSGACG00000020514	rab34b	63	32.716
ENSGACG00000013611	-	78	30.000	ENSGACG00000000729	rhebl1	85	30.000
ENSGACG00000013611	-	78	34.132	ENSGACG00000009647	RAB7A	79	34.132
ENSGACG00000013611	-	79	45.679	ENSGACG00000020356	rab6a	78	45.679
ENSGACG00000013611	-	74	37.888	ENSGACG00000003972	rab9a	76	37.888
ENSGACG00000013611	-	77	36.943	ENSGACG00000013297	-	71	36.943
ENSGACG00000013611	-	86	32.065	ENSGACG00000011607	rab32b	83	32.065
ENSGACG00000013611	-	79	38.509	ENSGACG00000000789	rab1ba	79	38.509
ENSGACG00000013611	-	80	50.303	ENSGACG00000005397	si:ch211-247i17.1	94	50.303
ENSGACG00000013611	-	72	34.932	ENSGACG00000006151	rab23	67	36.709
ENSGACG00000013611	-	77	36.250	ENSGACG00000001950	RAB39B	74	36.250
ENSGACG00000013611	-	79	34.706	ENSGACG00000018711	rasl11a	69	34.706
ENSGACG00000013611	-	74	37.086	ENSGACG00000013249	rab25b	72	37.086
ENSGACG00000013611	-	77	38.217	ENSGACG00000015479	rab11bb	72	38.217
ENSGACG00000013611	-	86	35.519	ENSGACG00000014915	si:dkey-16l2.16	81	35.519
ENSGACG00000013611	-	79	44.444	ENSGACG00000017153	rab41	77	44.444
ENSGACG00000013611	-	77	36.076	ENSGACG00000006162	-	72	36.076
ENSGACG00000013611	-	74	34.568	ENSGACG00000018291	rab9b	76	34.568
ENSGACG00000013611	-	78	31.250	ENSGACG00000005608	rab22a	82	31.250
ENSGACG00000013611	-	78	41.250	ENSGACG00000005979	RAB15	77	41.250
ENSGACG00000013611	-	77	35.849	ENSGACG00000020437	-	78	36.076
ENSGACG00000013611	-	78	34.545	ENSGACG00000018745	rab33a	71	34.545
ENSGACG00000013611	-	74	34.591	ENSGACG00000014578	RAB9A	78	34.591
ENSGACG00000013611	-	77	38.037	ENSGACG00000010473	RAB29	78	38.037
ENSGACG00000013611	-	76	37.805	ENSGACG00000016395	rab18b	80	37.805
ENSGACG00000013611	-	76	30.323	ENSGACG00000012474	rabl2	68	30.323
ENSGACG00000013611	-	81	39.394	ENSGACG00000013401	zgc:171927	81	39.752
ENSGACG00000013611	-	76	37.805	ENSGACG00000001694	rab18a	78	37.805
ENSGACG00000013611	-	79	45.062	ENSGACG00000013721	rab6bb	78	45.062
ENSGACG00000013611	-	73	32.468	ENSGACG00000007818	si:ch73-116o1.2	76	32.468
ENSGACG00000013611	-	79	44.379	ENSGACG00000003726	rab6ba	79	44.379
ENSGACG00000013611	-	90	64.674	ENSGACG00000019767	-	86	64.674
ENSGACG00000013611	-	75	38.562	ENSGACG00000013259	rab11al	71	38.562
ENSGACG00000013611	-	79	39.752	ENSGACG00000019642	-	79	39.752
ENSGACG00000013611	-	76	38.065	ENSGACG00000013548	rab35b	77	38.065
ENSGACG00000013611	-	82	31.737	ENSGACG00000016799	-	97	31.737
ENSGACG00000013611	-	85	32.961	ENSGACG00000011190	rab34a	67	32.961
ENSGACG00000013611	-	86	36.932	ENSGACG00000016164	rab4a	78	36.932
ENSGACG00000013611	-	78	34.132	ENSGACG00000000807	-	80	34.132
ENSGACG00000013611	-	77	36.709	ENSGACG00000008659	rab5c	72	36.709
ENSGACG00000013611	-	79	38.889	ENSGACG00000018847	-	72	38.889
ENSGACG00000013611	-	82	36.095	ENSGACG00000004997	rab5aa	78	36.095
ENSGACG00000013611	-	72	37.333	ENSGACG00000019134	si:cabz01085950.1	73	37.333
ENSGACG00000013611	-	81	38.554	ENSGACG00000016639	rab12	76	38.788
ENSGACG00000013611	-	81	33.136	ENSGACG00000014678	rab36	64	33.136
ENSGACG00000013611	-	79	46.584	ENSGACG00000007722	rab15	92	46.711
ENSGACG00000013611	-	87	35.754	ENSGACG00000019540	rab33ba	81	35.754
ENSGACG00000013611	-	78	38.365	ENSGACG00000014905	rab2a	74	38.365
ENSGACG00000013611	-	79	42.236	ENSGACG00000012006	rab30	81	42.236
ENSGACG00000013611	-	72	38.514	ENSGACG00000001725	zgc:101559	64	38.514
ENSGACG00000013611	-	76	36.774	ENSGACG00000004965	rab25a	75	36.774
ENSGACG00000013611	-	81	46.061	ENSGACG00000011925	rab13	80	47.205
ENSGACG00000013611	-	74	31.410	ENSGACG00000015457	dnajc27	57	31.410
ENSGACG00000013611	-	79	39.130	ENSGACG00000003864	rab1ab	79	39.130
ENSGACG00000013611	-	78	30.625	ENSGACG00000016680	rheb	85	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013611	-	80	68.293	ENSACAG00000009389	-	98	68.293	Anolis_carolinensis
ENSGACG00000013611	-	82	70.659	ENSETEG00000005963	-	97	70.659	Echinops_telfairi
ENSGACG00000013611	-	80	50.610	ENSEEUG00000001438	-	98	50.610	Erinaceus_europaeus
ENSGACG00000013611	-	100	74.020	ENSGMOG00000006968	-	100	74.020	Gadus_morhua
ENSGACG00000013611	-	91	73.118	ENSLACG00000016518	-	62	69.898	Latimeria_chalumnae
ENSGACG00000013611	-	69	69.863	ENSLAFG00000016780	-	100	69.863	Loxodonta_africana
ENSGACG00000013611	-	80	68.712	ENSMLUG00000016268	-	99	68.712	Myotis_lucifugus
ENSGACG00000013611	-	82	71.257	ENSMEUG00000015626	-	100	71.257	Notamacropus_eugenii
ENSGACG00000013611	-	81	70.303	ENSOPRG00000007436	-	96	70.303	Ochotona_princeps
ENSGACG00000013611	-	53	56.637	ENSOANG00000030700	-	74	56.637	Ornithorhynchus_anatinus
ENSGACG00000013611	-	80	71.951	ENSPSIG00000008757	-	84	71.951	Pelodiscus_sinensis
ENSGACG00000013611	-	82	58.683	ENSPCAG00000001228	-	97	58.683	Procavia_capensis
ENSGACG00000013611	-	80	69.512	ENSSHAG00000006833	-	99	69.512	Sarcophilus_harrisii
ENSGACG00000013611	-	80	69.512	ENSTGUG00000013171	-	98	69.512	Taeniopygia_guttata
ENSGACG00000013611	-	80	67.683	ENSTTRG00000002070	-	95	67.683	Tursiops_truncatus