EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000013742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2120 bases
Position: chrgroupI:20042715-20044834
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000018157	zf-C2H2_jaz	PF12171.8	6.4e-05	1	1
ENSGACP00000018157	NUFIP1	PF10453.9	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018192	-	963	-	ENSGACP00000018157	287 (aa)	-	G3PKM7

Gene Model

Click here to download ENSGACG00000013742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013742	-	100	67.347	ENSAPOG00000002081	-	53	68.707	Acanthochromis_polyacanthus
ENSGACG00000013742	-	58	52.247	ENSCHOG00000004676	NUFIP1	53	51.832	Choloepus_hoffmanni
ENSGACG00000013742	-	59	43.275	ENSCING00000004707	-	74	42.353	Ciona_intestinalis
ENSGACG00000013742	-	94	39.456	ENSDORG00000003359	Nufip1	50	39.615	Dipodomys_ordii
ENSGACG00000013742	-	91	56.716	ENSGMOG00000003533	-	90	58.303	Gadus_morhua
ENSGACG00000013742	-	93	48.507	ENSGAFG00000015062	-	56	48.507	Gambusia_affinis
ENSGACG00000013742	-	100	64.164	ENSHBUG00000021837	-	65	65.074	Haplochromis_burtoni
ENSGACG00000013742	-	93	44.718	ENSIPUG00000004479	Nufip1	61	44.964	Ictalurus_punctatus
ENSGACG00000013742	-	92	40.550	ENSSTOG00000009128	NUFIP1	55	41.429	Ictidomys_tridecemlineatus
ENSGACG00000013742	-	100	70.333	ENSLBEG00000009014	-	63	70.667	Labrus_bergylta
ENSGACG00000013742	-	100	65.101	ENSMAMG00000009951	-	51	66.107	Mastacembelus_armatus
ENSGACG00000013742	-	89	40.293	ENSMICG00000003419	NUFIP1	54	40.221	Microcebus_murinus
ENSGACG00000013742	-	94	36.585	ENSMOCG00000008223	Nufip1	57	37.849	Microtus_ochrogaster
ENSGACG00000013742	-	75	66.364	ENSMMOG00000004347	-	60	56.655	Mola_mola
ENSGACG00000013742	-	86	42.182	ENSMODG00000014924	-	58	42.182	Monodelphis_domestica
ENSGACG00000013742	-	100	50.331	ENSNBRG00000002217	-	61	47.653	Neolamprologus_brichardi
ENSGACG00000013742	-	100	60.410	ENSONIG00000013193	-	59	62.454	Oreochromis_niloticus
ENSGACG00000013742	-	61	49.468	ENSOANG00000015591	-	53	48.404	Ornithorhynchus_anatinus
ENSGACG00000013742	-	79	43.443	ENSOARG00000007556	NUFIP1	57	42.623	Ovis_aries
ENSGACG00000013742	-	85	41.538	ENSPPRG00000012625	NUFIP1	50	41.538	Panthera_pardus
ENSGACG00000013742	-	85	42.969	ENSPTIG00000020246	NUFIP1	50	42.969	Panthera_tigris_altaica
ENSGACG00000013742	-	84	41.455	ENSPCIG00000029589	-	63	42.143	Phascolarctos_cinereus
ENSGACG00000013742	-	91	54.511	ENSPFOG00000004016	-	55	62.963	Poecilia_formosa
ENSGACG00000013742	-	91	54.135	ENSPLAG00000004476	-	54	56.146	Poecilia_latipinna
ENSGACG00000013742	-	100	63.823	ENSPNYG00000019243	-	66	64.706	Pundamilia_nyererei
ENSGACG00000013742	-	85	41.509	ENSSHAG00000002127	-	60	41.729	Sarcophilus_harrisii
ENSGACG00000013742	-	91	67.857	ENSSMAG00000000264	-	52	65.806	Scophthalmus_maximus
ENSGACG00000013742	-	100	69.381	ENSSDUG00000008016	-	51	70.033	Seriola_dumerili
ENSGACG00000013742	-	100	68.506	ENSSLDG00000020762	-	51	69.156	Seriola_lalandi_dorsalis
ENSGACG00000013742	-	99	64.068	ENSSPAG00000023214	-	51	66.780	Stegastes_partitus
ENSGACG00000013742	-	62	50.785	ENSSSCG00000009420	NUFIP1	52	42.083	Sus_scrofa
ENSGACG00000013742	-	85	44.578	ENSUAMG00000019689	NUFIP1	60	44.578	Ursus_americanus