EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013818 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6470 bases
Position: chrgroupXI:13517054-13523523
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000018250	RRM_1	PF00076.22	5.9e-27	1	2
ENSGACP00000018250	RRM_1	PF00076.22	5.9e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018285	-	2163	-	ENSGACP00000018250	720 (aa)	-	G3PKX0

Gene Model

Click here to download ENSGACG00000013818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013818	raver1	51	55.172	ENSGACG00000007122	raver2	56	56.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013818	raver1	99	51.129	ENSG00000161847	RAVER1	89	60.227	Homo_sapiens
ENSGACG00000013818	raver1	99	76.236	ENSAPOG00000017267	raver1	86	74.176	Acanthochromis_polyacanthus
ENSGACG00000013818	raver1	99	49.602	ENSAMEG00000011738	RAVER1	96	48.280	Ailuropoda_melanoleuca
ENSGACG00000013818	raver1	99	77.304	ENSAOCG00000005128	raver1	91	75.378	Amphiprion_ocellaris
ENSGACG00000013818	raver1	99	77.459	ENSAPEG00000010854	raver1	91	87.324	Amphiprion_percula
ENSGACG00000013818	raver1	100	74.796	ENSATEG00000021004	raver1	94	72.207	Anabas_testudineus
ENSGACG00000013818	raver1	63	54.747	ENSACAG00000008386	-	74	53.785	Anolis_carolinensis
ENSGACG00000013818	raver1	100	74.286	ENSACLG00000018492	raver1	90	72.517	Astatotilapia_calliptera
ENSGACG00000013818	raver1	72	91.837	ENSAMXG00000005132	raver1	93	59.167	Astyanax_mexicanus
ENSGACG00000013818	raver1	89	66.412	ENSBTAG00000015721	RAVER1	94	67.302	Bos_taurus
ENSGACG00000013818	raver1	99	50.067	ENSCAFG00000017861	RAVER1	50	67.575	Canis_familiaris
ENSGACG00000013818	raver1	99	50.067	ENSCAFG00020024449	RAVER1	51	67.575	Canis_lupus_dingo
ENSGACG00000013818	raver1	99	50.066	ENSCHIG00000006718	RAVER1	60	67.575	Capra_hircus
ENSGACG00000013818	raver1	62	66.944	ENSTSYG00000027107	RAVER1	64	70.645	Carlito_syrichta
ENSGACG00000013818	raver1	75	55.748	ENSCAPG00000002269	RAVER1	59	70.764	Cavia_aperea
ENSGACG00000013818	raver1	69	57.605	ENSCCAG00000031723	RAVER1	50	65.775	Cebus_capucinus
ENSGACG00000013818	raver1	97	48.977	ENSCPBG00000005349	-	77	68.696	Chrysemys_picta_bellii
ENSGACG00000013818	raver1	99	68.027	ENSCSEG00000021092	raver1	94	67.024	Cynoglossus_semilaevis
ENSGACG00000013818	raver1	87	81.038	ENSCVAG00000013971	raver1	88	79.102	Cyprinodon_variegatus
ENSGACG00000013818	raver1	84	75.052	ENSDARG00000052617	raver1	73	85.532	Danio_rerio
ENSGACG00000013818	raver1	56	61.465	ENSDNOG00000035742	-	58	60.204	Dasypus_novemcinctus
ENSGACG00000013818	raver1	66	62.821	ENSDORG00000010106	-	81	62.703	Dipodomys_ordii
ENSGACG00000013818	raver1	51	50.949	ENSETEG00000008201	-	58	52.201	Echinops_telfairi
ENSGACG00000013818	raver1	54	66.162	ENSEASG00005010544	-	66	67.575	Equus_asinus_asinus
ENSGACG00000013818	raver1	99	67.729	ENSELUG00000023287	raver1	93	67.036	Esox_lucius
ENSGACG00000013818	raver1	56	64.508	ENSFCAG00000009435	RAVER1	59	67.575	Felis_catus
ENSGACG00000013818	raver1	100	71.605	ENSGMOG00000003649	raver1	100	71.331	Gadus_morhua
ENSGACG00000013818	raver1	100	70.365	ENSGAFG00000015944	raver1	94	68.435	Gambusia_affinis
ENSGACG00000013818	raver1	86	69.003	ENSGAGG00000011748	-	95	67.039	Gopherus_agassizii
ENSGACG00000013818	raver1	99	74.110	ENSHBUG00000021210	raver1	94	68.399	Haplochromis_burtoni
ENSGACG00000013818	raver1	96	50.272	ENSHGLG00000015460	RAVER1	83	67.218	Heterocephalus_glaber_female
ENSGACG00000013818	raver1	96	50.272	ENSHGLG00100000812	RAVER1	83	67.218	Heterocephalus_glaber_male
ENSGACG00000013818	raver1	88	76.969	ENSHCOG00000000449	raver1	86	74.606	Hippocampus_comes
ENSGACG00000013818	raver1	99	61.781	ENSIPUG00000013153	raver1	85	70.392	Ictalurus_punctatus
ENSGACG00000013818	raver1	99	49.738	ENSSTOG00000003241	RAVER1	99	50.067	Ictidomys_tridecemlineatus
ENSGACG00000013818	raver1	100	49.539	ENSJJAG00000018219	-	100	49.737	Jaculus_jaculus
ENSGACG00000013818	raver1	100	71.020	ENSKMAG00000017355	raver1	95	68.707	Kryptolebias_marmoratus
ENSGACG00000013818	raver1	92	74.742	ENSLBEG00000008268	raver1	90	71.935	Labrus_bergylta
ENSGACG00000013818	raver1	91	48.373	ENSLACG00000005809	-	99	48.936	Latimeria_chalumnae
ENSGACG00000013818	raver1	85	65.116	ENSLOCG00000007500	raver1	94	54.663	Lepisosteus_oculatus
ENSGACG00000013818	raver1	99	50.066	ENSLAFG00000003664	-	53	68.750	Loxodonta_africana
ENSGACG00000013818	raver1	99	51.523	ENSMMUG00000014897	RAVER1	60	67.416	Macaca_mulatta
ENSGACG00000013818	raver1	99	51.523	ENSMLEG00000041959	RAVER1	96	49.536	Mandrillus_leucophaeus
ENSGACG00000013818	raver1	100	73.161	ENSMAMG00000012059	raver1	95	70.845	Mastacembelus_armatus
ENSGACG00000013818	raver1	100	74.422	ENSMZEG00005019002	raver1	95	72.653	Maylandia_zebra
ENSGACG00000013818	raver1	97	50.408	ENSMAUG00000017948	-	99	50.066	Mesocricetus_auratus
ENSGACG00000013818	raver1	99	50.668	ENSMICG00000010326	RAVER1	52	67.575	Microcebus_murinus
ENSGACG00000013818	raver1	99	75.820	ENSMMOG00000012093	raver1	94	73.907	Mola_mola
ENSGACG00000013818	raver1	96	48.309	ENSMODG00000005584	-	88	47.796	Monodelphis_domestica
ENSGACG00000013818	raver1	100	73.706	ENSMALG00000016569	raver1	95	73.025	Monopterus_albus
ENSGACG00000013818	raver1	99	49.599	ENSMLUG00000012328	RAVER1	99	49.666	Myotis_lucifugus
ENSGACG00000013818	raver1	97	48.583	ENSNGAG00000001260	-	61	65.014	Nannospalax_galili
ENSGACG00000013818	raver1	100	65.986	ENSNBRG00000010139	raver1	94	65.306	Neolamprologus_brichardi
ENSGACG00000013818	raver1	78	57.660	ENSMEUG00000003281	-	88	55.645	Notamacropus_eugenii
ENSGACG00000013818	raver1	96	50.000	ENSODEG00000016260	RAVER1	59	66.760	Octodon_degus
ENSGACG00000013818	raver1	83	84.242	ENSONIG00000001559	raver1	92	81.633	Oreochromis_niloticus
ENSGACG00000013818	raver1	99	48.677	ENSOCUG00000020918	RAVER1	50	64.305	Oryctolagus_cuniculus
ENSGACG00000013818	raver1	100	72.033	ENSORLG00000005458	raver1	94	70.123	Oryzias_latipes
ENSGACG00000013818	raver1	100	72.306	ENSORLG00020004392	raver1	94	70.396	Oryzias_latipes_hni
ENSGACG00000013818	raver1	100	72.715	ENSORLG00015017222	raver1	94	70.805	Oryzias_latipes_hsok
ENSGACG00000013818	raver1	100	64.384	ENSOMEG00000023956	raver1	94	63.014	Oryzias_melastigma
ENSGACG00000013818	raver1	100	48.964	ENSOGAG00000011071	RAVER1	50	65.775	Otolemur_garnettii
ENSGACG00000013818	raver1	99	50.000	ENSPPRG00000009912	RAVER1	59	67.575	Panthera_pardus
ENSGACG00000013818	raver1	99	50.329	ENSPCIG00000018695	-	99	50.136	Phascolarctos_cinereus
ENSGACG00000013818	raver1	100	69.867	ENSPFOG00000007016	raver1	94	70.107	Poecilia_formosa
ENSGACG00000013818	raver1	93	69.913	ENSPLAG00000020793	raver1	92	67.878	Poecilia_latipinna
ENSGACG00000013818	raver1	100	70.771	ENSPMEG00000011220	raver1	85	79.959	Poecilia_mexicana
ENSGACG00000013818	raver1	100	67.852	ENSPREG00000006864	raver1	94	66.074	Poecilia_reticulata
ENSGACG00000013818	raver1	68	58.960	ENSPPYG00000010514	RAVER1	82	49.270	Pongo_abelii
ENSGACG00000013818	raver1	99	49.347	ENSPCOG00000026605	RAVER1	96	48.883	Propithecus_coquereli
ENSGACG00000013818	raver1	96	49.863	ENSPVAG00000003689	RAVER1	99	49.337	Pteropus_vampyrus
ENSGACG00000013818	raver1	84	83.230	ENSPNYG00000013284	raver1	87	82.195	Pundamilia_nyererei
ENSGACG00000013818	raver1	98	64.237	ENSPNAG00000015476	raver1	93	63.274	Pygocentrus_nattereri
ENSGACG00000013818	raver1	99	52.279	ENSRBIG00000034702	RAVER1	50	67.575	Rhinopithecus_bieti
ENSGACG00000013818	raver1	99	52.279	ENSRROG00000031186	RAVER1	50	67.575	Rhinopithecus_roxellana
ENSGACG00000013818	raver1	100	50.798	ENSSBOG00000023423	RAVER1	51	65.508	Saimiri_boliviensis_boliviensis
ENSGACG00000013818	raver1	91	49.927	ENSSHAG00000008181	-	90	50.000	Sarcophilus_harrisii
ENSGACG00000013818	raver1	100	76.294	ENSSMAG00000004546	raver1	94	74.497	Scophthalmus_maximus
ENSGACG00000013818	raver1	100	78.610	ENSSDUG00000021063	raver1	95	76.158	Seriola_dumerili
ENSGACG00000013818	raver1	100	78.610	ENSSLDG00000014505	raver1	95	76.158	Seriola_lalandi_dorsalis
ENSGACG00000013818	raver1	99	77.049	ENSSPAG00000000688	raver1	94	75.137	Stegastes_partitus
ENSGACG00000013818	raver1	99	50.264	ENSSSCG00000013650	-	64	67.575	Sus_scrofa
ENSGACG00000013818	raver1	99	71.939	ENSTRUG00000025641	raver1	94	71.114	Takifugu_rubripes
ENSGACG00000013818	raver1	99	50.067	ENSVVUG00000028976	RAVER1	50	67.575	Vulpes_vulpes
ENSGACG00000013818	raver1	66	64.000	ENSXETG00000011622	raver1	64	64.706	Xenopus_tropicalis
ENSGACG00000013818	raver1	100	71.448	ENSXCOG00000016368	raver1	94	70.068	Xiphophorus_couchianus
ENSGACG00000013818	raver1	100	71.583	ENSXMAG00000000217	raver1	94	71.973	Xiphophorus_maculatus