EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000013839 (Gene tree)
Gene ID: -
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like neuron-specific RNA binding protein 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 11154 bases
Position: chrgroupXI:13579541-13590694
Accession: ZDB-GENE-980526-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000018291	RRM_5	PF13893.6	1.6e-12	1	2
ENSGACP00000018291	RRM_5	PF13893.6	1.6e-12	2	2
ENSGACP00000018286	RRM_5	PF13893.6	1.8e-12	1	2
ENSGACP00000018286	RRM_5	PF13893.6	1.8e-12	2	2
ENSGACP00000018291	RRM_1	PF00076.22	1.2e-64	1	3
ENSGACP00000018291	RRM_1	PF00076.22	1.2e-64	2	3
ENSGACP00000018291	RRM_1	PF00076.22	1.2e-64	3	3
ENSGACP00000018286	RRM_1	PF00076.22	1.4e-64	1	3
ENSGACP00000018286	RRM_1	PF00076.22	1.4e-64	2	3
ENSGACP00000018286	RRM_1	PF00076.22	1.4e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018321	-	1455	-	ENSGACP00000018286	358 (aa)	-	G3PL06
ENSGACT00000018326	-	1059	-	ENSGACP00000018291	352 (aa)	-	G3PL11

Gene Model

Click here to download ENSGACG00000013839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000013839	elavl3	92	36.145	ENSGACG00000007179	pabpc4	59	36.145
ENSGACG00000013839	elavl3	98	84.488	ENSGACG00000011152	elavl4	100	84.488
ENSGACG00000013839	elavl3	92	37.349	ENSGACG00000003572	pabpc1a	59	37.349
ENSGACG00000013839	elavl3	53	32.292	ENSGACG00000015174	rbms1a	53	32.984
ENSGACG00000013839	elavl3	98	82.222	ENSGACG00000019484	elavl2	100	82.222
ENSGACG00000013839	elavl3	72	44.444	ENSGACG00000014226	celf1	63	44.444
ENSGACG00000013839	elavl3	92	37.349	ENSGACG00000003771	pabpc1b	65	37.349
ENSGACG00000013839	elavl3	63	41.818	ENSGACG00000005671	RBMS1	55	35.079
ENSGACG00000013839	elavl3	90	37.179	ENSGACG00000015800	tia1l	69	37.179
ENSGACG00000013839	elavl3	85	42.529	ENSGACG00000003274	celf3a	98	34.043
ENSGACG00000013839	elavl3	73	41.860	ENSGACG00000011707	celf3b	56	41.860
ENSGACG00000013839	elavl3	88	37.179	ENSGACG00000003365	tial1	71	37.179
ENSGACG00000013839	elavl3	61	36.667	ENSGACG00000009332	rbms2b	54	34.615
ENSGACG00000013839	elavl3	82	35.433	ENSGACG00000004426	CELF2	52	43.023
ENSGACG00000013839	elavl3	88	38.462	ENSGACG00000013294	-	76	38.462
ENSGACG00000013839	elavl3	88	38.272	ENSGACG00000002797	rbm39b	82	38.272
ENSGACG00000013839	elavl3	89	41.379	ENSGACG00000008752	celf4	57	41.379
ENSGACG00000013839	elavl3	96	63.103	ENSGACG00000013329	-	93	63.448
ENSGACG00000013839	elavl3	90	70.000	ENSGACG00000010657	elavl1a	95	70.000
ENSGACG00000013839	elavl3	80	40.000	ENSGACG00000016626	si:dkey-205h23.2	66	35.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013839	elavl3	100	88.889	ENSG00000196361	ELAVL3	100	90.000	Homo_sapiens
ENSGACG00000013839	elavl3	99	97.429	ENSAPOG00000017565	elavl3	99	97.429	Acanthochromis_polyacanthus
ENSGACG00000013839	elavl3	99	86.517	ENSAMEG00000010487	ELAVL3	99	87.640	Ailuropoda_melanoleuca
ENSGACG00000013839	elavl3	99	97.429	ENSACIG00000024190	elavl3	99	97.429	Amphilophus_citrinellus
ENSGACG00000013839	elavl3	100	99.441	ENSAOCG00000005054	elavl3	100	99.441	Amphiprion_ocellaris
ENSGACG00000013839	elavl3	100	99.441	ENSAPEG00000011145	elavl3	100	99.441	Amphiprion_percula
ENSGACG00000013839	elavl3	98	97.399	ENSATEG00000020941	elavl3	99	97.399	Anabas_testudineus
ENSGACG00000013839	elavl3	98	92.500	ENSACAG00000016958	ELAVL3	93	92.500	Anolis_carolinensis
ENSGACG00000013839	elavl3	100	89.136	ENSANAG00000030798	ELAVL3	100	90.251	Aotus_nancymaae
ENSGACG00000013839	elavl3	99	97.421	ENSACLG00000018260	elavl3	99	97.421	Astatotilapia_calliptera
ENSGACG00000013839	elavl3	99	98.854	ENSAMXG00000040498	elavl3	99	98.854	Astyanax_mexicanus
ENSGACG00000013839	elavl3	100	89.167	ENSBTAG00000014412	ELAVL3	100	90.278	Bos_taurus
ENSGACG00000013839	elavl3	100	87.193	ENSCJAG00000005589	ELAVL3	100	88.283	Callithrix_jacchus
ENSGACG00000013839	elavl3	100	87.193	ENSCAFG00000017350	ELAVL3	100	88.283	Canis_familiaris
ENSGACG00000013839	elavl3	99	89.045	ENSCAFG00020004614	ELAVL3	98	89.944	Canis_lupus_dingo
ENSGACG00000013839	elavl3	99	87.603	ENSCHIG00000003436	ELAVL3	99	88.705	Capra_hircus
ENSGACG00000013839	elavl3	99	87.328	ENSTSYG00000036621	ELAVL3	99	88.430	Carlito_syrichta
ENSGACG00000013839	elavl3	89	74.383	ENSCAPG00000017620	ELAVL3	99	75.617	Cavia_aperea
ENSGACG00000013839	elavl3	89	74.383	ENSCPOG00000001793	ELAVL3	99	75.617	Cavia_porcellus
ENSGACG00000013839	elavl3	100	87.193	ENSCCAG00000034350	ELAVL3	100	88.283	Cebus_capucinus
ENSGACG00000013839	elavl3	100	87.193	ENSCATG00000044086	ELAVL3	100	88.283	Cercocebus_atys
ENSGACG00000013839	elavl3	100	86.921	ENSCLAG00000016404	ELAVL3	100	88.011	Chinchilla_lanigera
ENSGACG00000013839	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSGACG00000013839	elavl3	100	92.500	ENSCPBG00000023982	ELAVL3	100	92.500	Chrysemys_picta_bellii
ENSGACG00000013839	elavl3	100	87.193	ENSCANG00000038728	ELAVL3	100	88.283	Colobus_angolensis_palliatus
ENSGACG00000013839	elavl3	100	86.649	ENSCGRG00001018927	Elavl3	100	87.738	Cricetulus_griseus_chok1gshd
ENSGACG00000013839	elavl3	99	86.777	ENSCGRG00000007158	Elavl3	99	87.879	Cricetulus_griseus_crigri
ENSGACG00000013839	elavl3	99	96.552	ENSCSEG00000021095	elavl3	99	96.552	Cynoglossus_semilaevis
ENSGACG00000013839	elavl3	100	99.441	ENSCVAG00000014060	elavl3	100	99.441	Cyprinodon_variegatus
ENSGACG00000013839	elavl3	100	99.721	ENSDARG00000014420	elavl3	100	99.721	Danio_rerio
ENSGACG00000013839	elavl3	99	86.226	ENSDORG00000002538	Elavl3	99	87.328	Dipodomys_ordii
ENSGACG00000013839	elavl3	50	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSGACG00000013839	elavl3	100	87.193	ENSEASG00005004561	ELAVL3	100	88.283	Equus_asinus_asinus
ENSGACG00000013839	elavl3	99	89.045	ENSECAG00000020594	ELAVL3	100	90.000	Equus_caballus
ENSGACG00000013839	elavl3	99	98.286	ENSELUG00000023043	elavl3	99	98.286	Esox_lucius
ENSGACG00000013839	elavl3	100	87.193	ENSFCAG00000024763	ELAVL3	100	88.283	Felis_catus
ENSGACG00000013839	elavl3	99	84.857	ENSFDAG00000008449	ELAVL3	99	84.857	Fukomys_damarensis
ENSGACG00000013839	elavl3	99	97.421	ENSFHEG00000001675	elavl3	99	97.421	Fundulus_heteroclitus
ENSGACG00000013839	elavl3	100	99.721	ENSGMOG00000003760	elavl3	100	99.721	Gadus_morhua
ENSGACG00000013839	elavl3	57	76.190	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSGACG00000013839	elavl3	99	99.437	ENSGAFG00000016015	elavl3	98	99.437	Gambusia_affinis
ENSGACG00000013839	elavl3	84	92.213	ENSGAGG00000016141	ELAVL3	100	92.213	Gopherus_agassizii
ENSGACG00000013839	elavl3	99	87.328	ENSGGOG00000008635	ELAVL3	99	88.430	Gorilla_gorilla
ENSGACG00000013839	elavl3	99	99.427	ENSHBUG00000020978	elavl3	99	99.427	Haplochromis_burtoni
ENSGACG00000013839	elavl3	100	87.193	ENSHGLG00000015199	ELAVL3	100	88.283	Heterocephalus_glaber_female
ENSGACG00000013839	elavl3	84	69.000	ENSHGLG00000019379	-	97	69.000	Heterocephalus_glaber_female
ENSGACG00000013839	elavl3	95	85.673	ENSHGLG00100011200	ELAVL3	100	86.819	Heterocephalus_glaber_male
ENSGACG00000013839	elavl3	99	99.718	ENSHCOG00000015894	elavl3	99	99.713	Hippocampus_comes
ENSGACG00000013839	elavl3	99	97.135	ENSIPUG00000013002	elavl3	98	97.135	Ictalurus_punctatus
ENSGACG00000013839	elavl3	100	87.193	ENSSTOG00000021111	ELAVL3	100	88.283	Ictidomys_tridecemlineatus
ENSGACG00000013839	elavl3	99	88.154	ENSJJAG00000023513	Elavl3	99	88.154	Jaculus_jaculus
ENSGACG00000013839	elavl3	99	97.429	ENSKMAG00000017412	elavl3	99	97.429	Kryptolebias_marmoratus
ENSGACG00000013839	elavl3	99	97.429	ENSLBEG00000008073	elavl3	98	97.429	Labrus_bergylta
ENSGACG00000013839	elavl3	100	95.890	ENSLOCG00000007647	elavl3	100	95.890	Lepisosteus_oculatus
ENSGACG00000013839	elavl3	99	87.088	ENSLAFG00000005013	ELAVL3	99	88.187	Loxodonta_africana
ENSGACG00000013839	elavl3	100	87.193	ENSMFAG00000003692	ELAVL3	100	88.283	Macaca_fascicularis
ENSGACG00000013839	elavl3	100	87.193	ENSMMUG00000020616	ELAVL3	100	88.283	Macaca_mulatta
ENSGACG00000013839	elavl3	100	86.921	ENSMNEG00000043973	ELAVL3	100	88.011	Macaca_nemestrina
ENSGACG00000013839	elavl3	97	82.857	ENSMLEG00000013976	ELAVL3	100	82.857	Mandrillus_leucophaeus
ENSGACG00000013839	elavl3	99	96.848	ENSMAMG00000011697	elavl3	99	96.848	Mastacembelus_armatus
ENSGACG00000013839	elavl3	100	99.441	ENSMZEG00005019053	elavl3	100	99.441	Maylandia_zebra
ENSGACG00000013839	elavl3	99	86.777	ENSMAUG00000016478	Elavl3	99	87.879	Mesocricetus_auratus
ENSGACG00000013839	elavl3	99	87.328	ENSMICG00000016528	ELAVL3	99	88.430	Microcebus_murinus
ENSGACG00000013839	elavl3	100	86.649	ENSMOCG00000002046	Elavl3	100	87.738	Microtus_ochrogaster
ENSGACG00000013839	elavl3	99	97.421	ENSMMOG00000012154	elavl3	99	97.421	Mola_mola
ENSGACG00000013839	elavl3	99	90.730	ENSMODG00000006653	ELAVL3	92	90.730	Monodelphis_domestica
ENSGACG00000013839	elavl3	99	99.437	ENSMALG00000016659	elavl3	99	99.437	Monopterus_albus
ENSGACG00000013839	elavl3	98	89.205	MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	Mus_caroli
ENSGACG00000013839	elavl3	100	86.649	ENSMUSG00000003410	Elavl3	100	89.200	Mus_musculus
ENSGACG00000013839	elavl3	98	88.920	MGP_PahariEiJ_G0014760	Elavl3	100	90.057	Mus_pahari
ENSGACG00000013839	elavl3	50	83.036	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSGACG00000013839	elavl3	100	86.921	ENSMPUG00000005040	ELAVL3	100	88.011	Mustela_putorius_furo
ENSGACG00000013839	elavl3	99	88.462	ENSMLUG00000016320	ELAVL3	99	88.462	Myotis_lucifugus
ENSGACG00000013839	elavl3	100	87.193	ENSNGAG00000000968	Elavl3	100	88.283	Nannospalax_galili
ENSGACG00000013839	elavl3	99	99.437	ENSNBRG00000010319	elavl3	99	99.437	Neolamprologus_brichardi
ENSGACG00000013839	elavl3	99	91.185	ENSMEUG00000016706	ELAVL3	99	91.185	Notamacropus_eugenii
ENSGACG00000013839	elavl3	85	89.431	ENSOPRG00000007373	ELAVL3	99	89.431	Ochotona_princeps
ENSGACG00000013839	elavl3	100	87.193	ENSODEG00000015790	ELAVL3	100	88.283	Octodon_degus
ENSGACG00000013839	elavl3	99	99.437	ENSONIG00000001538	elavl3	98	99.437	Oreochromis_niloticus
ENSGACG00000013839	elavl3	88	91.270	ENSOANG00000015046	ELAVL3	98	91.270	Ornithorhynchus_anatinus
ENSGACG00000013839	elavl3	100	99.162	ENSORLG00000005379	elavl3	100	99.162	Oryzias_latipes
ENSGACG00000013839	elavl3	100	99.441	ENSORLG00020004570	elavl3	100	99.441	Oryzias_latipes_hni
ENSGACG00000013839	elavl3	100	98.324	ENSORLG00015000662	elavl3	100	98.324	Oryzias_latipes_hsok
ENSGACG00000013839	elavl3	99	97.421	ENSOMEG00000023959	elavl3	99	97.421	Oryzias_melastigma
ENSGACG00000013839	elavl3	100	87.193	ENSOGAG00000007072	ELAVL3	100	88.283	Otolemur_garnettii
ENSGACG00000013839	elavl3	100	87.466	ENSOARG00000018464	ELAVL3	100	88.556	Ovis_aries
ENSGACG00000013839	elavl3	100	87.193	ENSPPAG00000033972	ELAVL3	100	88.283	Pan_paniscus
ENSGACG00000013839	elavl3	100	87.193	ENSPPRG00000005151	ELAVL3	100	88.283	Panthera_pardus
ENSGACG00000013839	elavl3	97	85.799	ENSPTIG00000013610	ELAVL3	97	86.982	Panthera_tigris_altaica
ENSGACG00000013839	elavl3	100	87.193	ENSPTRG00000010506	ELAVL3	100	88.283	Pan_troglodytes
ENSGACG00000013839	elavl3	100	87.193	ENSPANG00000005849	ELAVL3	100	88.283	Papio_anubis
ENSGACG00000013839	elavl3	100	98.603	ENSPKIG00000016207	elavl3	100	98.603	Paramormyrops_kingsleyae
ENSGACG00000013839	elavl3	99	97.421	ENSPMGG00000002016	elavl3	99	97.421	Periophthalmus_magnuspinnatus
ENSGACG00000013839	elavl3	98	94.309	ENSPFOG00000007754	elavl3	100	94.309	Poecilia_formosa
ENSGACG00000013839	elavl3	98	97.399	ENSPLAG00000001547	elavl3	99	97.399	Poecilia_latipinna
ENSGACG00000013839	elavl3	98	97.399	ENSPMEG00000010156	elavl3	99	97.399	Poecilia_mexicana
ENSGACG00000013839	elavl3	100	99.441	ENSPREG00000006971	elavl3	100	99.441	Poecilia_reticulata
ENSGACG00000013839	elavl3	84	78.545	ENSPPYG00000009583	-	98	79.636	Pongo_abelii
ENSGACG00000013839	elavl3	84	84.685	ENSPCAG00000015952	ELAVL3	65	85.271	Procavia_capensis
ENSGACG00000013839	elavl3	100	87.193	ENSPCOG00000023781	ELAVL3	100	88.283	Propithecus_coquereli
ENSGACG00000013839	elavl3	100	87.193	ENSPVAG00000014893	ELAVL3	100	88.283	Pteropus_vampyrus
ENSGACG00000013839	elavl3	99	97.421	ENSPNYG00000013186	elavl3	97	97.421	Pundamilia_nyererei
ENSGACG00000013839	elavl3	100	97.260	ENSPNAG00000003633	elavl3	100	97.260	Pygocentrus_nattereri
ENSGACG00000013839	elavl3	100	86.649	ENSRNOG00000013752	Elavl3	100	87.738	Rattus_norvegicus
ENSGACG00000013839	elavl3	100	87.193	ENSRBIG00000034762	ELAVL3	100	88.283	Rhinopithecus_bieti
ENSGACG00000013839	elavl3	89	87.600	ENSRROG00000034305	ELAVL3	99	90.435	Rhinopithecus_roxellana
ENSGACG00000013839	elavl3	99	87.328	ENSSBOG00000030047	ELAVL3	100	90.385	Saimiri_boliviensis_boliviensis
ENSGACG00000013839	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSGACG00000013839	elavl3	94	98.521	ENSSFOG00015023630	elavl3	100	98.521	Scleropages_formosus
ENSGACG00000013839	elavl3	99	96.562	ENSSMAG00000004671	elavl3	99	96.562	Scophthalmus_maximus
ENSGACG00000013839	elavl3	99	97.429	ENSSDUG00000020708	elavl3	99	97.429	Seriola_dumerili
ENSGACG00000013839	elavl3	99	99.427	ENSSLDG00000013769	elavl3	99	99.427	Seriola_lalandi_dorsalis
ENSGACG00000013839	elavl3	99	77.473	ENSSARG00000005949	ELAVL3	99	78.571	Sorex_araneus
ENSGACG00000013839	elavl3	99	97.429	ENSSPAG00000000990	elavl3	99	97.429	Stegastes_partitus
ENSGACG00000013839	elavl3	100	87.193	ENSSSCG00000013617	ELAVL3	100	88.283	Sus_scrofa
ENSGACG00000013839	elavl3	98	97.399	ENSTRUG00000010719	elavl3	99	97.399	Takifugu_rubripes
ENSGACG00000013839	elavl3	99	98.603	ENSTNIG00000018572	elavl3	99	98.603	Tetraodon_nigroviridis
ENSGACG00000013839	elavl3	97	81.957	ENSTBEG00000006133	ELAVL3	100	83.180	Tupaia_belangeri
ENSGACG00000013839	elavl3	100	86.921	ENSTTRG00000001789	ELAVL3	100	88.011	Tursiops_truncatus
ENSGACG00000013839	elavl3	99	87.784	ENSUAMG00000000405	ELAVL3	98	88.889	Ursus_americanus
ENSGACG00000013839	elavl3	97	84.281	ENSUMAG00000019546	ELAVL3	87	85.619	Ursus_maritimus
ENSGACG00000013839	elavl3	100	88.889	ENSVVUG00000023733	ELAVL3	100	90.000	Vulpes_vulpes
ENSGACG00000013839	elavl3	99	90.368	ENSXETG00000016741	elavl3	99	90.368	Xenopus_tropicalis
ENSGACG00000013839	elavl3	99	97.421	ENSXMAG00000018287	elavl3	99	97.421	Xiphophorus_maculatus