EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000013878 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2072 bases
Position: chrgroupXX:17744041-17746112
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000018334	Sua5_yciO_yrdC	PF01300.18	9.3e-45	1	1
ENSGACP00000018330	Sua5_yciO_yrdC	PF01300.18	9.9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018365	-	878	-	ENSGACP00000018330	245 (aa)	-	G3PL50
ENSGACT00000018369	-	851	-	ENSGACP00000018334	240 (aa)	-	G3PL54

Gene Model

Click here to download ENSGACG00000013878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000013878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000013878	yrdc	95	59.307	ENSG00000196449	YRDC	81	59.052	Homo_sapiens
ENSGACG00000013878	yrdc	98	83.122	ENSAPOG00000024293	yrdc	89	83.122	Acanthochromis_polyacanthus
ENSGACG00000013878	yrdc	75	64.324	ENSAMEG00000001173	YRDC	97	64.324	Ailuropoda_melanoleuca
ENSGACG00000013878	yrdc	98	79.747	ENSACIG00000017330	yrdc	87	79.747	Amphilophus_citrinellus
ENSGACG00000013878	yrdc	98	83.544	ENSAOCG00000021647	yrdc	89	83.544	Amphiprion_ocellaris
ENSGACG00000013878	yrdc	98	83.122	ENSAPEG00000006164	yrdc	89	83.122	Amphiprion_percula
ENSGACG00000013878	yrdc	99	80.417	ENSATEG00000010086	yrdc	89	80.417	Anabas_testudineus
ENSGACG00000013878	yrdc	80	62.755	ENSACAG00000017203	YRDC	99	60.280	Anolis_carolinensis
ENSGACG00000013878	yrdc	86	58.019	ENSANAG00000031052	-	76	58.019	Aotus_nancymaae
ENSGACG00000013878	yrdc	80	63.452	ENSANAG00000028788	-	83	63.452	Aotus_nancymaae
ENSGACG00000013878	yrdc	98	82.278	ENSACLG00000027775	yrdc	87	83.122	Astatotilapia_calliptera
ENSGACG00000013878	yrdc	99	70.833	ENSAMXG00000037791	yrdc	88	72.936	Astyanax_mexicanus
ENSGACG00000013878	yrdc	95	58.621	ENSBTAG00000006510	YRDC	82	58.621	Bos_taurus
ENSGACG00000013878	yrdc	87	34.419	WBGene00012997	Y48C3A.18	98	37.815	Caenorhabditis_elegans
ENSGACG00000013878	yrdc	95	58.190	ENSCJAG00000002078	YRDC	63	58.190	Callithrix_jacchus
ENSGACG00000013878	yrdc	95	57.328	ENSCAFG00000003253	YRDC	83	57.328	Canis_familiaris
ENSGACG00000013878	yrdc	95	57.759	ENSCAFG00020007843	YRDC	83	57.759	Canis_lupus_dingo
ENSGACG00000013878	yrdc	95	55.833	ENSCHIG00000007882	YRDC	86	55.833	Capra_hircus
ENSGACG00000013878	yrdc	70	63.372	ENSTSYG00000005555	YRDC	61	63.372	Carlito_syrichta
ENSGACG00000013878	yrdc	95	58.621	ENSCPOG00000036144	YRDC	81	58.621	Cavia_porcellus
ENSGACG00000013878	yrdc	95	58.190	ENSCCAG00000028891	YRDC	81	58.190	Cebus_capucinus
ENSGACG00000013878	yrdc	95	57.576	ENSCATG00000036928	YRDC	81	58.621	Cercocebus_atys
ENSGACG00000013878	yrdc	78	64.211	ENSCLAG00000015012	YRDC	80	58.333	Chinchilla_lanigera
ENSGACG00000013878	yrdc	95	57.576	ENSCSAG00000001116	YRDC	81	58.621	Chlorocebus_sabaeus
ENSGACG00000013878	yrdc	70	55.357	ENSCHOG00000005500	YRDC	86	53.039	Choloepus_hoffmanni
ENSGACG00000013878	yrdc	85	65.238	ENSCPBG00000018446	YRDC	89	65.238	Chrysemys_picta_bellii
ENSGACG00000013878	yrdc	84	48.837	ENSCING00000007564	-	98	48.837	Ciona_intestinalis
ENSGACG00000013878	yrdc	84	46.226	ENSCSAVG00000009982	-	98	46.226	Ciona_savignyi
ENSGACG00000013878	yrdc	95	57.143	ENSCANG00000031111	YRDC	81	58.190	Colobus_angolensis_palliatus
ENSGACG00000013878	yrdc	84	60.680	ENSCGRG00001014496	-	73	60.680	Cricetulus_griseus_chok1gshd
ENSGACG00000013878	yrdc	95	51.948	ENSCGRG00001000829	-	63	51.931	Cricetulus_griseus_chok1gshd
ENSGACG00000013878	yrdc	86	82.039	ENSCSEG00000019075	yrdc	81	76.786	Cynoglossus_semilaevis
ENSGACG00000013878	yrdc	98	74.262	ENSCVAG00000017355	yrdc	88	74.262	Cyprinodon_variegatus
ENSGACG00000013878	yrdc	98	69.068	ENSDARG00000041428	yrdc	98	69.068	Danio_rerio
ENSGACG00000013878	yrdc	95	56.710	ENSDNOG00000038789	-	88	53.304	Dasypus_novemcinctus
ENSGACG00000013878	yrdc	79	47.959	ENSDNOG00000036198	-	94	47.959	Dasypus_novemcinctus
ENSGACG00000013878	yrdc	78	63.351	ENSDORG00000008788	Yrdc	84	63.351	Dipodomys_ordii
ENSGACG00000013878	yrdc	99	43.145	FBgn0061361	CG33786	99	43.145	Drosophila_melanogaster
ENSGACG00000013878	yrdc	95	45.259	ENSETEG00000003442	YRDC	81	45.259	Echinops_telfairi
ENSGACG00000013878	yrdc	98	48.305	ENSEBUG00000014080	yrdc	98	48.305	Eptatretus_burgeri
ENSGACG00000013878	yrdc	86	62.381	ENSEASG00005012253	YRDC	86	58.025	Equus_asinus_asinus
ENSGACG00000013878	yrdc	95	59.740	ENSECAG00000022522	YRDC	81	59.483	Equus_caballus
ENSGACG00000013878	yrdc	98	74.583	ENSELUG00000018071	yrdc	78	74.583	Esox_lucius
ENSGACG00000013878	yrdc	95	58.009	ENSFCAG00000011018	YRDC	86	55.556	Felis_catus
ENSGACG00000013878	yrdc	78	66.492	ENSFALG00000000964	YRDC	89	65.152	Ficedula_albicollis
ENSGACG00000013878	yrdc	100	71.545	ENSFHEG00000001029	yrdc	87	74.091	Fundulus_heteroclitus
ENSGACG00000013878	yrdc	86	79.710	ENSGMOG00000015635	yrdc	99	79.710	Gadus_morhua
ENSGACG00000013878	yrdc	97	59.072	ENSGALG00000029001	YRDC	91	59.072	Gallus_gallus
ENSGACG00000013878	yrdc	98	76.793	ENSGAFG00000008396	yrdc	87	76.793	Gambusia_affinis
ENSGACG00000013878	yrdc	85	66.190	ENSGAGG00000014968	YRDC	90	66.190	Gopherus_agassizii
ENSGACG00000013878	yrdc	95	59.307	ENSGGOG00000007619	YRDC	81	59.052	Gorilla_gorilla
ENSGACG00000013878	yrdc	98	81.435	ENSHBUG00000009298	yrdc	87	82.278	Haplochromis_burtoni
ENSGACG00000013878	yrdc	95	58.009	ENSHGLG00000014075	YRDC	81	58.009	Heterocephalus_glaber_female
ENSGACG00000013878	yrdc	80	63.452	ENSHGLG00100002734	YRDC	70	63.452	Heterocephalus_glaber_male
ENSGACG00000013878	yrdc	98	70.954	ENSHCOG00000006598	yrdc	90	72.845	Hippocampus_comes
ENSGACG00000013878	yrdc	98	72.574	ENSIPUG00000014985	yrdc	96	72.574	Ictalurus_punctatus
ENSGACG00000013878	yrdc	95	58.009	ENSSTOG00000001643	YRDC	81	58.009	Ictidomys_tridecemlineatus
ENSGACG00000013878	yrdc	98	78.903	ENSKMAG00000013468	yrdc	87	78.903	Kryptolebias_marmoratus
ENSGACG00000013878	yrdc	98	83.966	ENSLBEG00000027501	yrdc	87	83.966	Labrus_bergylta
ENSGACG00000013878	yrdc	97	58.848	ENSLACG00000010689	YRDC	98	63.721	Latimeria_chalumnae
ENSGACG00000013878	yrdc	78	30.392	ENSLACG00000017624	si:ch211-153b23.3	62	30.392	Latimeria_chalumnae
ENSGACG00000013878	yrdc	98	66.109	ENSLOCG00000003321	yrdc	97	66.109	Lepisosteus_oculatus
ENSGACG00000013878	yrdc	95	58.621	ENSLAFG00000017556	YRDC	81	58.621	Loxodonta_africana
ENSGACG00000013878	yrdc	84	61.165	ENSMFAG00000003487	YRDC	96	62.621	Macaca_fascicularis
ENSGACG00000013878	yrdc	95	57.143	ENSMMUG00000005372	YRDC	61	58.621	Macaca_mulatta
ENSGACG00000013878	yrdc	95	57.576	ENSMNEG00000029348	YRDC	81	58.621	Macaca_nemestrina
ENSGACG00000013878	yrdc	58	66.197	ENSMLEG00000041122	YRDC	94	68.310	Mandrillus_leucophaeus
ENSGACG00000013878	yrdc	98	79.661	ENSMAMG00000007315	yrdc	87	79.661	Mastacembelus_armatus
ENSGACG00000013878	yrdc	98	82.278	ENSMZEG00005006948	yrdc	87	83.122	Maylandia_zebra
ENSGACG00000013878	yrdc	81	67.172	ENSMGAG00000002833	YRDC	98	66.337	Meleagris_gallopavo
ENSGACG00000013878	yrdc	77	31.156	ENSMGAG00000005489	-	51	31.156	Meleagris_gallopavo
ENSGACG00000013878	yrdc	95	58.442	ENSMICG00000031688	YRDC	82	58.190	Microcebus_murinus
ENSGACG00000013878	yrdc	70	51.190	ENSMOCG00000000164	-	55	56.643	Microtus_ochrogaster
ENSGACG00000013878	yrdc	98	80.591	ENSMMOG00000002119	yrdc	87	80.591	Mola_mola
ENSGACG00000013878	yrdc	98	55.512	ENSMODG00000017750	YRDC	90	55.512	Monodelphis_domestica
ENSGACG00000013878	yrdc	98	79.915	ENSMALG00000012471	yrdc	87	79.915	Monopterus_albus
ENSGACG00000013878	yrdc	78	61.053	MGP_CAROLIEiJ_G0026453	Yrdc	97	66.667	Mus_caroli
ENSGACG00000013878	yrdc	84	60.680	ENSMUSG00000028889	Yrdc	100	66.667	Mus_musculus
ENSGACG00000013878	yrdc	95	57.328	MGP_PahariEiJ_G0028784	Yrdc	100	66.667	Mus_pahari
ENSGACG00000013878	yrdc	84	60.680	MGP_SPRETEiJ_G0027432	Yrdc	73	60.680	Mus_spretus
ENSGACG00000013878	yrdc	80	63.452	ENSMPUG00000014542	YRDC	78	63.452	Mustela_putorius_furo
ENSGACG00000013878	yrdc	82	61.000	ENSMLUG00000024310	-	97	61.000	Myotis_lucifugus
ENSGACG00000013878	yrdc	95	59.052	ENSMLUG00000000955	-	81	59.052	Myotis_lucifugus
ENSGACG00000013878	yrdc	84	53.883	ENSMLUG00000028796	-	73	53.883	Myotis_lucifugus
ENSGACG00000013878	yrdc	86	60.000	ENSNGAG00000019099	Yrdc	74	60.000	Nannospalax_galili
ENSGACG00000013878	yrdc	98	82.700	ENSNBRG00000009475	yrdc	88	82.700	Neolamprologus_brichardi
ENSGACG00000013878	yrdc	95	58.442	ENSNLEG00000011665	YRDC	82	58.190	Nomascus_leucogenys
ENSGACG00000013878	yrdc	85	61.836	ENSMEUG00000005068	YRDC	97	61.137	Notamacropus_eugenii
ENSGACG00000013878	yrdc	95	57.576	ENSODEG00000007401	YRDC	100	65.714	Octodon_degus
ENSGACG00000013878	yrdc	98	81.435	ENSONIG00000016213	yrdc	98	82.278	Oreochromis_niloticus
ENSGACG00000013878	yrdc	95	58.621	ENSOCUG00000005384	YRDC	78	58.369	Oryctolagus_cuniculus
ENSGACG00000013878	yrdc	99	75.833	ENSORLG00000014393	yrdc	90	75.833	Oryzias_latipes
ENSGACG00000013878	yrdc	99	76.987	ENSORLG00020019663	yrdc	90	76.987	Oryzias_latipes_hni
ENSGACG00000013878	yrdc	99	75.732	ENSORLG00015004625	yrdc	90	75.732	Oryzias_latipes_hsok
ENSGACG00000013878	yrdc	99	76.569	ENSOMEG00000018550	yrdc	90	76.569	Oryzias_melastigma
ENSGACG00000013878	yrdc	95	57.328	ENSOGAG00000030474	YRDC	83	57.328	Otolemur_garnettii
ENSGACG00000013878	yrdc	95	56.897	ENSOARG00000019873	YRDC	85	55.833	Ovis_aries
ENSGACG00000013878	yrdc	57	68.794	ENSPPAG00000039722	-	95	68.794	Pan_paniscus
ENSGACG00000013878	yrdc	95	58.009	ENSPPRG00000007752	YRDC	86	55.556	Panthera_pardus
ENSGACG00000013878	yrdc	61	63.576	ENSPTIG00000019821	YRDC	64	63.576	Panthera_tigris_altaica
ENSGACG00000013878	yrdc	95	58.874	ENSPTRG00000000557	YRDC	81	59.052	Pan_troglodytes
ENSGACG00000013878	yrdc	95	57.143	ENSPANG00000006487	YRDC	61	58.621	Papio_anubis
ENSGACG00000013878	yrdc	98	70.168	ENSPKIG00000004574	yrdc	85	70.168	Paramormyrops_kingsleyae
ENSGACG00000013878	yrdc	93	60.177	ENSPSIG00000006483	YRDC	73	63.636	Pelodiscus_sinensis
ENSGACG00000013878	yrdc	98	77.637	ENSPMGG00000004184	yrdc	91	77.637	Periophthalmus_magnuspinnatus
ENSGACG00000013878	yrdc	71	60.920	ENSPEMG00000016985	Yrdc	75	60.920	Peromyscus_maniculatus_bairdii
ENSGACG00000013878	yrdc	75	56.216	ENSPMAG00000002905	yrdc	99	56.216	Petromyzon_marinus
ENSGACG00000013878	yrdc	98	54.941	ENSPCIG00000025731	YRDC	90	54.941	Phascolarctos_cinereus
ENSGACG00000013878	yrdc	98	77.215	ENSPFOG00000023097	yrdc	87	77.215	Poecilia_formosa
ENSGACG00000013878	yrdc	98	76.793	ENSPLAG00000020882	yrdc	87	76.793	Poecilia_latipinna
ENSGACG00000013878	yrdc	98	77.215	ENSPMEG00000013237	yrdc	88	77.215	Poecilia_mexicana
ENSGACG00000013878	yrdc	98	77.637	ENSPREG00000005285	yrdc	87	77.637	Poecilia_reticulata
ENSGACG00000013878	yrdc	84	63.107	ENSPPYG00000001523	-	84	63.107	Pongo_abelii
ENSGACG00000013878	yrdc	95	59.483	ENSPCAG00000016850	YRDC	81	59.483	Procavia_capensis
ENSGACG00000013878	yrdc	95	58.442	ENSPCOG00000013214	YRDC	81	58.190	Propithecus_coquereli
ENSGACG00000013878	yrdc	95	57.613	ENSPVAG00000010147	YRDC	86	57.613	Pteropus_vampyrus
ENSGACG00000013878	yrdc	98	81.857	ENSPNYG00000013956	yrdc	87	82.700	Pundamilia_nyererei
ENSGACG00000013878	yrdc	90	73.733	ENSPNAG00000015625	yrdc	88	73.733	Pygocentrus_nattereri
ENSGACG00000013878	yrdc	84	60.194	ENSRNOG00000025424	Yrdc	73	60.194	Rattus_norvegicus
ENSGACG00000013878	yrdc	95	57.576	ENSRBIG00000032289	YRDC	81	58.621	Rhinopithecus_bieti
ENSGACG00000013878	yrdc	88	59.174	ENSRROG00000039370	YRDC	73	60.550	Rhinopithecus_roxellana
ENSGACG00000013878	yrdc	86	59.535	ENSSBOG00000018937	YRDC	85	62.687	Saimiri_boliviensis_boliviensis
ENSGACG00000013878	yrdc	58	66.434	ENSSHAG00000013957	-	99	65.306	Sarcophilus_harrisii
ENSGACG00000013878	yrdc	86	73.810	ENSSFOG00015006128	yrdc	91	72.897	Scleropages_formosus
ENSGACG00000013878	yrdc	98	81.435	ENSSMAG00000005195	yrdc	89	81.435	Scophthalmus_maximus
ENSGACG00000013878	yrdc	60	34.667	ENSSDUG00000006736	-	77	34.667	Seriola_dumerili
ENSGACG00000013878	yrdc	53	32.090	ENSSDUG00000006631	-	63	32.031	Seriola_dumerili
ENSGACG00000013878	yrdc	98	81.013	ENSSDUG00000009775	yrdc	88	81.857	Seriola_dumerili
ENSGACG00000013878	yrdc	53	32.031	ENSSLDG00000008694	-	62	32.031	Seriola_lalandi_dorsalis
ENSGACG00000013878	yrdc	98	81.013	ENSSLDG00000003196	yrdc	88	81.857	Seriola_lalandi_dorsalis
ENSGACG00000013878	yrdc	90	64.253	ENSSPUG00000003946	YRDC	85	64.253	Sphenodon_punctatus
ENSGACG00000013878	yrdc	98	81.857	ENSSPAG00000012559	yrdc	88	81.857	Stegastes_partitus
ENSGACG00000013878	yrdc	95	60.173	ENSSSCG00000040425	YRDC	86	57.613	Sus_scrofa
ENSGACG00000013878	yrdc	58	69.718	ENSTGUG00000001507	YRDC	99	68.493	Taeniopygia_guttata
ENSGACG00000013878	yrdc	98	71.849	ENSTRUG00000005923	yrdc	89	70.082	Takifugu_rubripes
ENSGACG00000013878	yrdc	64	63.694	ENSTBEG00000008863	YRDC	99	63.694	Tupaia_belangeri
ENSGACG00000013878	yrdc	57	68.085	ENSTTRG00000013538	-	95	68.085	Tursiops_truncatus
ENSGACG00000013878	yrdc	80	64.467	ENSUAMG00000006150	YRDC	96	64.467	Ursus_americanus
ENSGACG00000013878	yrdc	95	46.121	ENSVPAG00000006642	YRDC	97	46.121	Vicugna_pacos
ENSGACG00000013878	yrdc	96	61.277	ENSXETG00000014420	yrdc	98	61.277	Xenopus_tropicalis
ENSGACG00000013878	yrdc	98	75.527	ENSXCOG00000000829	yrdc	98	75.527	Xiphophorus_couchianus
ENSGACG00000013878	yrdc	98	76.371	ENSXMAG00000014606	yrdc	83	76.371	Xiphophorus_maculatus