EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGACG00000014135 (Gene tree)
Gene ID
-
Gene Symbol
lig4
Alias
zgc:165595
Full Name
ligase IV%2C DNA%2C ATP-dependent
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
2801 bases
Position
chrgroupI:20956431-20959231
Accession
ZDB-GENE-070820-10
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000018659RNA_ligasePF09414.106.7e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000018697-2733-ENSGACP00000018659910 (aa)-G3PM28
Gene Model
Click here to download ENSGACG00000014135's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014135's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000014135lig49963.787ENSG00000174405LIG410064.218Homo_sapiens
ENSGACG00000014135lig49985.982ENSAPOG00000000866lig49985.651Acanthochromis_polyacanthus
ENSGACG00000014135lig410062.242ENSAMEG00000019685LIG49962.118Ailuropoda_melanoleuca
ENSGACG00000014135lig49984.862ENSACIG00000018309lig49984.862Amphilophus_citrinellus
ENSGACG00000014135lig49986.424ENSAOCG00000011768lig49986.093Amphiprion_ocellaris
ENSGACG00000014135lig49986.645ENSAPEG00000017815lig49986.313Amphiprion_percula
ENSGACG00000014135lig49985.055ENSATEG00000005583lig410085.055Anabas_testudineus
ENSGACG00000014135lig49665.068ENSAPLG00000001673LIG49965.068Anas_platyrhynchos
ENSGACG00000014135lig49964.790ENSACAG00000014566LIG410064.790Anolis_carolinensis
ENSGACG00000014135lig49963.455ENSANAG00000012446LIG49963.455Aotus_nancymaae
ENSGACG00000014135lig49984.309ENSACLG00000027051lig49984.309Astatotilapia_calliptera
ENSGACG00000014135lig410077.058ENSAMXG00000008192lig49477.058Astyanax_mexicanus
ENSGACG00000014135lig49963.787ENSBTAG00000015868LIG49963.787Bos_taurus
ENSGACG00000014135lig49963.245ENSCJAG00000014689LIG49963.234Callithrix_jacchus
ENSGACG00000014135lig49963.012ENSCAFG00000006031LIG49963.012Canis_familiaris
ENSGACG00000014135lig49963.012ENSCAFG00020021230LIG49963.012Canis_lupus_dingo
ENSGACG00000014135lig49963.677ENSCHIG00000001019LIG49963.677Capra_hircus
ENSGACG00000014135lig49963.455ENSCAPG00000006284LIG49963.344Cavia_aperea
ENSGACG00000014135lig49963.344ENSCPOG00000014266LIG49963.234Cavia_porcellus
ENSGACG00000014135lig49963.566ENSCCAG00000019971LIG49963.566Cebus_capucinus
ENSGACG00000014135lig49963.187ENSCATG00000021075LIG49962.967Cercocebus_atys
ENSGACG00000014135lig49963.656ENSCLAG00000003376LIG49963.656Chinchilla_lanigera
ENSGACG00000014135lig49963.123ENSCSAG00000000211LIG49962.901Chlorocebus_sabaeus
ENSGACG00000014135lig49966.593ENSCPBG00000023291LIG49966.117Chrysemys_picta_bellii
ENSGACG00000014135lig47145.917ENSCING00000009536-9945.917Ciona_intestinalis
ENSGACG00000014135lig48344.605ENSCSAVG00000010336-9844.605Ciona_savignyi
ENSGACG00000014135lig49963.455ENSCANG00000005805LIG49963.123Colobus_angolensis_palliatus
ENSGACG00000014135lig49963.053ENSCGRG00001012072Lig49962.942Cricetulus_griseus_chok1gshd
ENSGACG00000014135lig49963.053ENSCGRG00000013417Lig49962.942Cricetulus_griseus_crigri
ENSGACG00000014135lig49682.857ENSCSEG00000013905lig49582.857Cynoglossus_semilaevis
ENSGACG00000014135lig49983.682ENSCVAG00000007896lig49983.682Cyprinodon_variegatus
ENSGACG00000014135lig49976.374ENSDARG00000060620lig410076.154Danio_rerio
ENSGACG00000014135lig49962.611ENSDNOG00000000513LIG49962.611Dasypus_novemcinctus
ENSGACG00000014135lig49963.787ENSDORG00000027303Lig49963.787Dipodomys_ordii
ENSGACG00000014135lig48631.840FBgn0030506Lig48531.995Drosophila_melanogaster
ENSGACG00000014135lig49861.973ENSETEG00000015563LIG410062.306Echinops_telfairi
ENSGACG00000014135lig49945.820ENSEBUG00000014243lig49845.820Eptatretus_burgeri
ENSGACG00000014135lig49962.680ENSEASG00005022073LIG49962.680Equus_asinus_asinus
ENSGACG00000014135lig49962.901ENSECAG00000003257LIG49962.680Equus_caballus
ENSGACG00000014135lig49979.667ENSELUG00000006787lig49979.778Esox_lucius
ENSGACG00000014135lig49962.680ENSFCAG00000031985LIG49962.237Felis_catus
ENSGACG00000014135lig48866.914ENSFALG00000004214LIG49866.914Ficedula_albicollis
ENSGACG00000014135lig49962.569ENSFDAG00000008973LIG49962.569Fukomys_damarensis
ENSGACG00000014135lig49984.675ENSFHEG00000007398lig49084.675Fundulus_heteroclitus
ENSGACG00000014135lig48578.266ENSGMOG00000012843lig49978.266Gadus_morhua
ENSGACG00000014135lig49964.128ENSGALG00000016854LIG49964.128Gallus_gallus
ENSGACG00000014135lig49883.687ENSGAFG00000019779lig49583.241Gambusia_affinis
ENSGACG00000014135lig49963.566ENSGGOG00000027771LIG49963.566Gorilla_gorilla
ENSGACG00000014135lig49984.088ENSHBUG00000006245lig49984.088Haplochromis_burtoni
ENSGACG00000014135lig49963.677ENSHGLG00000000718LIG49963.677Heterocephalus_glaber_female
ENSGACG00000014135lig49963.677ENSHGLG00100003265LIG49963.677Heterocephalus_glaber_male
ENSGACG00000014135lig49980.373ENSHCOG00000012010lig410080.373Hippocampus_comes
ENSGACG00000014135lig49975.551ENSIPUG00000013748lig49975.220Ictalurus_punctatus
ENSGACG00000014135lig49964.120ENSSTOG00000024303LIG49964.120Ictidomys_tridecemlineatus
ENSGACG00000014135lig49963.355ENSJJAG00000006750Lig49963.123Jaculus_jaculus
ENSGACG00000014135lig49983.775ENSKMAG00000001149lig49983.333Kryptolebias_marmoratus
ENSGACG00000014135lig49186.941ENSLBEG00000014578lig410086.820Labrus_bergylta
ENSGACG00000014135lig49966.777ENSLACG00000003282LIG49966.777Latimeria_chalumnae
ENSGACG00000014135lig49971.240ENSLOCG00000008901lig49871.240Lepisosteus_oculatus
ENSGACG00000014135lig49962.816ENSLAFG00000031152LIG49962.583Loxodonta_africana
ENSGACG00000014135lig49963.344ENSMFAG00000037235LIG49963.123Macaca_fascicularis
ENSGACG00000014135lig49963.234ENSMMUG00000008874LIG49963.012Macaca_mulatta
ENSGACG00000014135lig49963.344ENSMNEG00000023575LIG49963.123Macaca_nemestrina
ENSGACG00000014135lig49963.123ENSMLEG00000026720LIG49962.901Mandrillus_leucophaeus
ENSGACG00000014135lig410085.620ENSMAMG00000008472lig49985.620Mastacembelus_armatus
ENSGACG00000014135lig49984.309ENSMZEG00005001855lig49984.309Maylandia_zebra
ENSGACG00000014135lig49964.168ENSMGAG00000015532LIG49964.168Meleagris_gallopavo
ENSGACG00000014135lig49962.791ENSMOCG00000019000Lig49962.791Microtus_ochrogaster
ENSGACG00000014135lig49985.430ENSMMOG00000004390lig49985.430Mola_mola
ENSGACG00000014135lig49963.776ENSMODG00000025064LIG49963.886Monodelphis_domestica
ENSGACG00000014135lig49984.879ENSMALG00000008555lig49984.879Monopterus_albus
ENSGACG00000014135lig49963.344MGP_CAROLIEiJ_G0030809Lig49963.344Mus_caroli
ENSGACG00000014135lig49963.234ENSMUSG00000049717Lig49963.234Mus_musculus
ENSGACG00000014135lig49963.123MGP_PahariEiJ_G0021270Lig49963.123Mus_pahari
ENSGACG00000014135lig49963.344MGP_SPRETEiJ_G0031917Lig49963.344Mus_spretus
ENSGACG00000014135lig49963.274ENSMPUG00000018675LIG49963.274Mustela_putorius_furo
ENSGACG00000014135lig49962.901ENSMLUG00000001267LIG49962.901Myotis_lucifugus
ENSGACG00000014135lig49964.230ENSNGAG00000013258Lig49963.898Nannospalax_galili
ENSGACG00000014135lig49984.309ENSNBRG00000021252lig49984.309Neolamprologus_brichardi
ENSGACG00000014135lig49963.123ENSNLEG00000007888LIG49963.123Nomascus_leucogenys
ENSGACG00000014135lig49962.252ENSOPRG00000005765LIG49962.237Ochotona_princeps
ENSGACG00000014135lig49962.857ENSODEG00000019683LIG49962.747Octodon_degus
ENSGACG00000014135lig49984.396ENSONIG00000011969lig49984.396Oreochromis_niloticus
ENSGACG00000014135lig49962.804ENSOCUG00000015734LIG49962.791Oryctolagus_cuniculus
ENSGACG00000014135lig49981.958ENSORLG00000004041lig49981.958Oryzias_latipes
ENSGACG00000014135lig49981.848ENSORLG00020019607lig49981.848Oryzias_latipes_hni
ENSGACG00000014135lig49982.068ENSORLG00015017754lig49982.068Oryzias_latipes_hsok
ENSGACG00000014135lig47586.812ENSOMEG00000003459lig410086.812Oryzias_melastigma
ENSGACG00000014135lig49963.455ENSOGAG00000032120LIG49963.455Otolemur_garnettii
ENSGACG00000014135lig48168.114ENSOARG00000005590LIG49768.114Ovis_aries
ENSGACG00000014135lig49963.566ENSPPAG00000032998LIG49963.566Pan_paniscus
ENSGACG00000014135lig49962.914ENSPPRG00000017804LIG49962.680Panthera_pardus
ENSGACG00000014135lig49962.804ENSPTIG00000010051LIG49962.569Panthera_tigris_altaica
ENSGACG00000014135lig49963.677ENSPTRG00000006025LIG49963.677Pan_troglodytes
ENSGACG00000014135lig49963.077ENSPANG00000007562LIG49963.077Papio_anubis
ENSGACG00000014135lig49975.220ENSPKIG00000011645lig49875.220Paramormyrops_kingsleyae
ENSGACG00000014135lig49965.932ENSPSIG00000001504LIG49965.932Pelodiscus_sinensis
ENSGACG00000014135lig49878.412ENSPMGG00000013486lig49978.060Periophthalmus_magnuspinnatus
ENSGACG00000014135lig49962.389ENSPEMG00000000076Lig49962.389Peromyscus_maniculatus_bairdii
ENSGACG00000014135lig49963.717ENSPCIG00000021882LIG49963.417Phascolarctos_cinereus
ENSGACG00000014135lig49884.787ENSPFOG00000000797lig49984.327Poecilia_formosa
ENSGACG00000014135lig49884.676ENSPLAG00000001196lig49984.216Poecilia_latipinna
ENSGACG00000014135lig49884.787ENSPMEG00000021353lig49984.327Poecilia_mexicana
ENSGACG00000014135lig49883.893ENSPREG00000007323lig49983.444Poecilia_reticulata
ENSGACG00000014135lig49963.123ENSPPYG00000005540LIG49963.123Pongo_abelii
ENSGACG00000014135lig49962.791ENSPVAG00000016403LIG49962.791Pteropus_vampyrus
ENSGACG00000014135lig49984.309ENSPNYG00000009660lig49984.309Pundamilia_nyererei
ENSGACG00000014135lig49878.906ENSPNAG00000028069LIG49978.683Pygocentrus_nattereri
ENSGACG00000014135lig49878.906ENSPNAG00000028056lig49978.683Pygocentrus_nattereri
ENSGACG00000014135lig49962.610ENSRNOG00000014605Lig49962.610Rattus_norvegicus
ENSGACG00000014135lig49962.791ENSRBIG00000039962LIG49962.680Rhinopithecus_bieti
ENSGACG00000014135lig49963.344ENSRROG00000006040LIG49963.234Rhinopithecus_roxellana
ENSGACG00000014135lig49963.344ENSSBOG00000019029LIG49963.344Saimiri_boliviensis_boliviensis
ENSGACG00000014135lig49961.665ENSSHAG00000009525LIG49961.665Sarcophilus_harrisii
ENSGACG00000014135lig49976.932ENSSFOG00015012835lig49976.821Scleropages_formosus
ENSGACG00000014135lig49979.691ENSSMAG00000011267lig49979.691Scophthalmus_maximus
ENSGACG00000014135lig49984.945ENSSDUG00000010343lig410084.902Seriola_dumerili
ENSGACG00000014135lig49983.626ENSSLDG00000003239lig410083.589Seriola_lalandi_dorsalis
ENSGACG00000014135lig49963.175ENSSARG00000006573LIG49963.065Sorex_araneus
ENSGACG00000014135lig49267.024ENSSPUG00000002444LIG410067.024Sphenodon_punctatus
ENSGACG00000014135lig49985.714ENSSPAG00000001609lig49985.714Stegastes_partitus
ENSGACG00000014135lig49963.053ENSSSCG00000009540LIG49962.788Sus_scrofa
ENSGACG00000014135lig49964.928ENSTGUG00000010795LIG49964.928Taeniopygia_guttata
ENSGACG00000014135lig49982.340ENSTRUG00000009984lig49982.340Takifugu_rubripes
ENSGACG00000014135lig49981.457ENSTNIG00000010348lig49981.678Tetraodon_nigroviridis
ENSGACG00000014135lig49962.901ENSTBEG00000017741LIG49962.901Tupaia_belangeri
ENSGACG00000014135lig49962.680ENSTTRG00000012660LIG49962.680Tursiops_truncatus
ENSGACG00000014135lig49962.404ENSUAMG00000003773LIG49962.279Ursus_americanus
ENSGACG00000014135lig49965.491ENSXETG00000002654lig49965.491Xenopus_tropicalis
ENSGACG00000014135lig49884.452ENSXCOG00000017401lig410083.772Xiphophorus_couchianus
ENSGACG00000014135lig49884.787ENSXMAG00000015142lig49983.991Xiphophorus_maculatus

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